Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm45452-201ENSMUST00000210905 177 ntBASIC2.7□□□□□ -1.98
Rfx1P48377 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.7□□□□□ -1.98
Rfx1P48377 Gm14568-201ENSMUST00000119321 294 ntBASIC2.69□□□□□ -1.98
Rfx1P48377 Gm24937-201ENSMUST00000122597 134 ntBASIC2.69□□□□□ -1.98
Rfx1P48377 Gm22500-201ENSMUST00000158982 99 ntBASIC2.69□□□□□ -1.98
Rfx1P48377 Snord87-201ENSMUST00000175437 87 ntBASIC2.69□□□□□ -1.98
Rfx1P48377 Gm24926-201ENSMUST00000178053 79 ntBASIC2.69□□□□□ -1.98
Rfx1P48377 Gm22632-201ENSMUST00000178266 79 ntBASIC2.69□□□□□ -1.98
Rfx1P48377 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC2.69□□□□□ -1.98
Rfx1P48377 Gm25855-201ENSMUST00000082787 72 ntBASIC2.69□□□□□ -1.98
Rfx1P48377 Gm22622-201ENSMUST00000082870 129 ntBASIC2.69□□□□□ -1.98
Rfx1P48377 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Rfx1P48377 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.69□□□□□ -1.98
Rfx1P48377 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
Rfx1P48377 Gm22554-201ENSMUST00000157798 147 ntBASIC2.68□□□□□ -1.98
Rfx1P48377 Gm23996-201ENSMUST00000158062 131 ntBASIC2.68□□□□□ -1.98
Rfx1P48377 Gm24358-201ENSMUST00000158424 288 ntBASIC2.68□□□□□ -1.98
Rfx1P48377 Gm24922-201ENSMUST00000158511 102 ntBASIC2.68□□□□□ -1.98
Rfx1P48377 Gm22664-201ENSMUST00000158719 105 ntBASIC2.68□□□□□ -1.98
Rfx1P48377 Mir8090-201ENSMUST00000185078 136 ntBASIC2.68□□□□□ -1.98
Rfx1P48377 Gm37796-201ENSMUST00000195327 134 ntBASIC2.68□□□□□ -1.98
Rfx1P48377 Gm24410-201ENSMUST00000083433 107 ntBASIC2.68□□□□□ -1.98
Rfx1P48377 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Rfx1P48377 Gm42718-201ENSMUST00000197319 2681 ntBASIC2.67□□□□□ -1.98
Rfx1P48377 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC2.67□□□□□ -1.98
Rfx1P48377 Gm44489-201ENSMUST00000104619 97 ntBASIC2.67□□□□□ -1.98
Rfx1P48377 Gm11856-201ENSMUST00000118712 276 ntBASIC2.67□□□□□ -1.98
Rfx1P48377 Gm25153-201ENSMUST00000157118 156 ntBASIC2.67□□□□□ -1.98
Rfx1P48377 Mir3076-201ENSMUST00000175415 60 ntBASIC2.67□□□□□ -1.98
Rfx1P48377 AC124739.2-201ENSMUST00000222201 109 ntBASIC2.67□□□□□ -1.98
Rfx1P48377 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
Rfx1P48377 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Rfx1P48377 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.66□□□□□ -1.98
Rfx1P48377 Gm25866-201ENSMUST00000158245 112 ntBASIC2.66□□□□□ -1.98
Rfx1P48377 AC126691.1-201ENSMUST00000226534 202 ntBASIC2.66□□□□□ -1.98
Rfx1P48377 Gm24148-201ENSMUST00000082762 80 ntBASIC2.66□□□□□ -1.98
Rfx1P48377 Gm23509-201ENSMUST00000083080 160 ntBASIC2.66□□□□□ -1.98
Rfx1P48377 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
Rfx1P48377 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
Rfx1P48377 Gm14946-201ENSMUST00000119859 296 ntBASIC2.65□□□□□ -1.99
Rfx1P48377 Gm23208-201ENSMUST00000158666 127 ntBASIC2.65□□□□□ -1.99
Rfx1P48377 Gm24816-201ENSMUST00000175311 151 ntBASIC2.65□□□□□ -1.99
Rfx1P48377 Mir6905-201ENSMUST00000184228 70 ntBASIC2.65□□□□□ -1.99
Rfx1P48377 Mir6419-201ENSMUST00000184784 113 ntBASIC2.65□□□□□ -1.99
Rfx1P48377 Mir7657-201ENSMUST00000196051 57 ntBASIC2.65□□□□□ -1.99
Rfx1P48377 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC2.65□□□□□ -1.99
Rfx1P48377 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Rfx1P48377 Snord64-201ENSMUST00000104003 67 ntBASIC2.64□□□□□ -1.99
Rfx1P48377 Gm16510-201ENSMUST00000153501 249 ntBASIC2.64□□□□□ -1.99
Rfx1P48377 Gm22079-201ENSMUST00000157592 106 ntBASIC2.64□□□□□ -1.99
Rfx1P48377 Gm24366-201ENSMUST00000175383 86 ntBASIC2.64□□□□□ -1.99
Rfx1P48377 Gm8508-201ENSMUST00000061226 363 ntBASIC2.64□□□□□ -1.99
Rfx1P48377 Snora69-201ENSMUST00000083708 131 ntBASIC2.64□□□□□ -1.99
Rfx1P48377 Gm26342-201ENSMUST00000104557 129 ntBASIC2.63□□□□□ -1.99
Rfx1P48377 Gm24274-201ENSMUST00000116787 124 ntBASIC2.63□□□□□ -1.99
Rfx1P48377 Gm24907-201ENSMUST00000116932 128 ntBASIC2.63□□□□□ -1.99
Rfx1P48377 Gm24718-201ENSMUST00000157521 136 ntBASIC2.63□□□□□ -1.99
Rfx1P48377 Gm16561-201ENSMUST00000163001 192 ntBASIC2.63□□□□□ -1.99
Rfx1P48377 Gm27722-201ENSMUST00000183908 76 ntBASIC2.63□□□□□ -1.99
Rfx1P48377 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.63□□□□□ -1.99
Rfx1P48377 Snora20-201ENSMUST00000082703 128 ntBASIC2.63□□□□□ -1.99
Rfx1P48377 Mir423-201ENSMUST00000083584 109 ntBASIC2.63□□□□□ -1.99
Rfx1P48377 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Rfx1P48377 Gm25642-201ENSMUST00000175137 66 ntBASIC2.62□□□□□ -1.99
Rfx1P48377 Gm25750-201ENSMUST00000175483 112 ntBASIC2.62□□□□□ -1.99
Rfx1P48377 Gm25006-201ENSMUST00000083813 107 ntBASIC2.62□□□□□ -1.99
Rfx1P48377 Gm12309-201ENSMUST00000119889 182 ntBASIC2.61□□□□□ -1.99
Rfx1P48377 Gm24916-201ENSMUST00000157287 79 ntBASIC2.61□□□□□ -1.99
Rfx1P48377 Gm25730-201ENSMUST00000178753 165 ntBASIC2.61□□□□□ -1.99
Rfx1P48377 CT033781.2-201ENSMUST00000221113 153 ntBASIC2.61□□□□□ -1.99
Rfx1P48377 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
Rfx1P48377 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Rfx1P48377 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Rfx1P48377 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Rfx1P48377 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Rfx1P48377 Gm25485-201ENSMUST00000104120 132 ntBASIC2.6□□□□□ -1.99
Rfx1P48377 Gm25529-201ENSMUST00000104850 92 ntBASIC2.6□□□□□ -1.99
Rfx1P48377 Gm26213-201ENSMUST00000158582 110 ntBASIC2.6□□□□□ -1.99
Rfx1P48377 Gm43865-201ENSMUST00000204721 127 ntBASIC2.6□□□□□ -1.99
Rfx1P48377 CT025689.3-201ENSMUST00000223817 301 ntBASIC2.6□□□□□ -1.99
Rfx1P48377 Snord104-201ENSMUST00000083192 70 ntBASIC2.6□□□□□ -1.99
Rfx1P48377 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC2.6□□□□□ -1.99
Rfx1P48377 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Rfx1P48377 Gm18795-202ENSMUST00000223373 2920 ntBASIC2.59□□□□□ -1.99
Rfx1P48377 Gm22796-201ENSMUST00000157234 106 ntBASIC2.59□□□□□ -1.99
Rfx1P48377 Gm24250-201ENSMUST00000157320 135 ntBASIC2.59□□□□□ -1.99
Rfx1P48377 Gm25658-201ENSMUST00000158472 128 ntBASIC2.59□□□□□ -1.99
Rfx1P48377 Gm23770-201ENSMUST00000178009 108 ntBASIC2.59□□□□□ -1.99
Rfx1P48377 Gm22832-201ENSMUST00000178022 108 ntBASIC2.59□□□□□ -1.99
Rfx1P48377 Gm23863-201ENSMUST00000178265 108 ntBASIC2.59□□□□□ -1.99
Rfx1P48377 Gm24828-201ENSMUST00000178507 108 ntBASIC2.59□□□□□ -1.99
Rfx1P48377 Gm23052-201ENSMUST00000178633 108 ntBASIC2.59□□□□□ -1.99
Rfx1P48377 Gm25729-201ENSMUST00000179050 108 ntBASIC2.59□□□□□ -1.99
Rfx1P48377 Gm25359-201ENSMUST00000179315 108 ntBASIC2.59□□□□□ -1.99
Rfx1P48377 Gm22624-201ENSMUST00000179913 108 ntBASIC2.59□□□□□ -1.99
Rfx1P48377 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.59□□□□□ -1.99
Rfx1P48377 Gm22884-201ENSMUST00000083127 140 ntBASIC2.59□□□□□ -1.99
Rfx1P48377 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Rfx1P48377 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.58□□□□□ -2
Rfx1P48377 Gm23434-201ENSMUST00000157179 100 ntBASIC2.58□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms