Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm24714-201ENSMUST00000102382 101 ntBASIC-1.26□□□□□ -2.61
HttP42859 AC153526.1-201ENSMUST00000219750 190 ntBASIC-1.26□□□□□ -2.61
HttP42859 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC-1.26□□□□□ -2.61
HttP42859 Gm44377-201ENSMUST00000199039 87 ntBASIC-1.27□□□□□ -2.61
HttP42859 Gm12255-201ENSMUST00000117184 284 ntBASIC-1.27□□□□□ -2.61
HttP42859 Gm23726-201ENSMUST00000178937 67 ntBASIC-1.27□□□□□ -2.61
HttP42859 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.28□□□□□ -2.61
HttP42859 Gm26158-201ENSMUST00000158973 119 ntBASIC-1.28□□□□□ -2.61
HttP42859 Gm27793-201ENSMUST00000183405 76 ntBASIC-1.28□□□□□ -2.61
HttP42859 Gm18729-201ENSMUST00000217230 621 ntBASIC-1.28□□□□□ -2.61
HttP42859 Snord60-201ENSMUST00000082834 78 ntBASIC-1.28□□□□□ -2.61
HttP42859 Gm25651-201ENSMUST00000083782 119 ntBASIC-1.28□□□□□ -2.61
HttP42859 Gm13065-201ENSMUST00000119178 141 ntBASIC-1.29□□□□□ -2.62
HttP42859 Gm26133-201ENSMUST00000157363 100 ntBASIC-1.29□□□□□ -2.62
HttP42859 Gm43381-201ENSMUST00000198553 165 ntBASIC-1.29□□□□□ -2.62
HttP42859 Gm6369-201ENSMUST00000069626 412 ntBASIC-1.29□□□□□ -2.62
HttP42859 Gm26203-201ENSMUST00000082911 114 ntBASIC-1.29□□□□□ -2.62
HttP42859 Gm22577-201ENSMUST00000083731 109 ntBASIC-1.29□□□□□ -2.62
HttP42859 AC124687.1-201ENSMUST00000221868 189 ntBASIC-1.29□□□□□ -2.62
HttP42859 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC-1.29□□□□□ -2.62
HttP42859 Gm22771-201ENSMUST00000104449 91 ntBASIC-1.29□□□□□ -2.62
HttP42859 Gm9059-201ENSMUST00000118319 183 ntBASIC-1.29□□□□□ -2.62
HttP42859 Gm7916-201ENSMUST00000120325 456 ntBASIC-1.29□□□□□ -2.62
HttP42859 Gm26200-201ENSMUST00000180273 79 ntBASIC-1.29□□□□□ -2.62
HttP42859 Gm44337-201ENSMUST00000196553 114 ntBASIC-1.29□□□□□ -2.62
HttP42859 Mir155-201ENSMUST00000083463 65 ntBASIC-1.29□□□□□ -2.62
HttP42859 Gm22157-201ENSMUST00000158410 104 ntBASIC-1.3□□□□□ -2.62
HttP42859 Ighv1-32-201ENSMUST00000195149 351 ntBASIC-1.3□□□□□ -2.62
HttP42859 Gm44300-201ENSMUST00000196792 121 ntBASIC-1.3□□□□□ -2.62
HttP42859 Gm22543-201ENSMUST00000104347 94 ntBASIC-1.3□□□□□ -2.62
HttP42859 Gm27749-201ENSMUST00000183651 125 ntBASIC-1.3□□□□□ -2.62
HttP42859 Gm5023-201ENSMUST00000217442 587 ntBASIC-1.3□□□□□ -2.62
HttP42859 AC192616.3-201ENSMUST00000220797 1124 ntBASIC-1.3□□□□□ -2.62
HttP42859 Gm25269-201ENSMUST00000122601 104 ntBASIC-1.31□□□□□ -2.62
HttP42859 Adgrg4-206ENSMUST00000168724 531 ntBASIC-1.31□□□□□ -2.62
HttP42859 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC-1.31□□□□□ -2.62
HttP42859 Gm24856-201ENSMUST00000082809 107 ntBASIC-1.31□□□□□ -2.62
HttP42859 Mir216b-201ENSMUST00000102363 86 ntBASIC-1.31□□□□□ -2.62
HttP42859 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC-1.31□□□□□ -2.62
HttP42859 Gm28414-201ENSMUST00000190111 294 ntBASIC-1.31□□□□□ -2.62
HttP42859 Gm44473-201ENSMUST00000204039 152 ntBASIC-1.31□□□□□ -2.62
HttP42859 Gm25403-201ENSMUST00000082971 143 ntBASIC-1.31□□□□□ -2.62
HttP42859 Gm25040-201ENSMUST00000103877 66 ntBASIC-1.32□□□□□ -2.62
HttP42859 Gm23881-201ENSMUST00000116872 66 ntBASIC-1.32□□□□□ -2.62
HttP42859 Gm26007-201ENSMUST00000158798 120 ntBASIC-1.32□□□□□ -2.62
HttP42859 Gm19248-201ENSMUST00000209404 110 ntBASIC-1.32□□□□□ -2.62
HttP42859 AC132833.2-201ENSMUST00000228699 157 ntBASIC-1.32□□□□□ -2.62
HttP42859 mt-Tw-201ENSMUST00000082397 67 ntBASIC-1.32□□□□□ -2.62
HttP42859 Mir451a-201ENSMUST00000093557 72 ntBASIC-1.32□□□□□ -2.62
HttP42859 Gm42721-201ENSMUST00000197165 1523 ntBASIC-1.32□□□□□ -2.62
HttP42859 Gm14638-201ENSMUST00000121338 216 ntBASIC-1.32□□□□□ -2.62
HttP42859 Gm25486-201ENSMUST00000158726 63 ntBASIC-1.32□□□□□ -2.62
HttP42859 Mir532-201ENSMUST00000093630 96 ntBASIC-1.32□□□□□ -2.62
HttP42859 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.33□□□□□ -2.62
HttP42859 Gm13711-201ENSMUST00000119708 453 ntBASIC-1.33□□□□□ -2.62
HttP42859 Gm25464-201ENSMUST00000175481 107 ntBASIC-1.33□□□□□ -2.62
HttP42859 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC-1.33□□□□□ -2.62
HttP42859 Gm14989-201ENSMUST00000120497 207 ntBASIC-1.33□□□□□ -2.62
HttP42859 Gm23917-201ENSMUST00000175256 98 ntBASIC-1.33□□□□□ -2.62
HttP42859 Gm22776-201ENSMUST00000178634 94 ntBASIC-1.33□□□□□ -2.62
HttP42859 Gm23767-201ENSMUST00000179278 94 ntBASIC-1.33□□□□□ -2.62
HttP42859 AC117202.2-201ENSMUST00000226491 1101 ntBASIC-1.33□□□□□ -2.62
HttP42859 Gm24355-201ENSMUST00000082858 122 ntBASIC-1.33□□□□□ -2.62
HttP42859 Gm26066-201ENSMUST00000083385 109 ntBASIC-1.33□□□□□ -2.62
HttP42859 Mir34a-201ENSMUST00000083559 102 ntBASIC-1.33□□□□□ -2.62
HttP42859 Gm12469-201ENSMUST00000117623 207 ntBASIC-1.34□□□□□ -2.62
HttP42859 Gm24006-201ENSMUST00000158462 132 ntBASIC-1.34□□□□□ -2.62
HttP42859 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC-1.34□□□□□ -2.62
HttP42859 Defb44-ps-201ENSMUST00000126871 219 ntBASIC-1.34□□□□□ -2.62
HttP42859 Gm27540-201ENSMUST00000184950 187 ntBASIC-1.34□□□□□ -2.62
HttP42859 AC122327.1-201ENSMUST00000220778 108 ntBASIC-1.34□□□□□ -2.62
HttP42859 AC102291.2-201ENSMUST00000228083 367 ntBASIC-1.34□□□□□ -2.62
HttP42859 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC-1.34□□□□□ -2.62
HttP42859 Mir122-201ENSMUST00000083468 66 ntBASIC-1.34□□□□□ -2.62
HttP42859 Gm23379-201ENSMUST00000180026 107 ntBASIC-1.35□□□□□ -2.62
HttP42859 Gm24415-201ENSMUST00000180218 107 ntBASIC-1.35□□□□□ -2.62
HttP42859 Gm29848-201ENSMUST00000203107 295 ntBASIC-1.35□□□□□ -2.62
HttP42859 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC-1.35□□□□□ -2.62
HttP42859 Gm24623-201ENSMUST00000082616 194 ntBASIC-1.35□□□□□ -2.62
HttP42859 Gm23676-201ENSMUST00000157314 105 ntBASIC-1.35□□□□□ -2.63
HttP42859 Snord116l14-201ENSMUST00000179875 94 ntBASIC-1.35□□□□□ -2.63
HttP42859 Gm23848-201ENSMUST00000083826 106 ntBASIC-1.35□□□□□ -2.63
HttP42859 Gm25879-201ENSMUST00000104330 107 ntBASIC-1.35□□□□□ -2.63
HttP42859 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC-1.35□□□□□ -2.63
HttP42859 Gm24000-201ENSMUST00000158063 89 ntBASIC-1.35□□□□□ -2.63
HttP42859 Gm28299-201ENSMUST00000189908 339 ntBASIC-1.35□□□□□ -2.63
HttP42859 Gm44282-201ENSMUST00000203199 190 ntBASIC-1.35□□□□□ -2.63
HttP42859 Gm23166-201ENSMUST00000157164 101 ntBASIC-1.36□□□□□ -2.63
HttP42859 Gm23637-201ENSMUST00000175075 94 ntBASIC-1.36□□□□□ -2.63
HttP42859 Gm28343-201ENSMUST00000185386 112 ntBASIC-1.36□□□□□ -2.63
HttP42859 Gm25598-201ENSMUST00000179031 107 ntBASIC-1.37□□□□□ -2.63
HttP42859 Mir6350-201ENSMUST00000183639 105 ntBASIC-1.37□□□□□ -2.63
HttP42859 Gm44665-201ENSMUST00000205381 251 ntBASIC-1.37□□□□□ -2.63
HttP42859 Gm25801-201ENSMUST00000082638 106 ntBASIC-1.37□□□□□ -2.63
HttP42859 Mir10a-201ENSMUST00000083585 110 ntBASIC-1.37□□□□□ -2.63
HttP42859 Gm23733-201ENSMUST00000083750 106 ntBASIC-1.37□□□□□ -2.63
HttP42859 Gm25008-201ENSMUST00000083809 81 ntBASIC-1.37□□□□□ -2.63
HttP42859 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC-1.37□□□□□ -2.63
HttP42859 Gm24439-201ENSMUST00000157894 117 ntBASIC-1.37□□□□□ -2.63
HttP42859 Mup-ps22-201ENSMUST00000121611 243 ntBASIC-1.37□□□□□ -2.63
Retrieved 100 of 76,532 protein–RNA pairs in 148.9 ms