Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 n-R5s183-201ENSMUST00000083939 115 ntBASIC0.54□□□□□ -2.32
Lire1P11260 Gm14946-201ENSMUST00000119859 296 ntBASIC0.53□□□□□ -2.32
Lire1P11260 Gm23982-201ENSMUST00000157141 106 ntBASIC0.53□□□□□ -2.32
Lire1P11260 Gm22321-201ENSMUST00000157152 104 ntBASIC0.53□□□□□ -2.32
Lire1P11260 Gm23584-201ENSMUST00000157655 129 ntBASIC0.53□□□□□ -2.32
Lire1P11260 Gm26236-201ENSMUST00000175536 137 ntBASIC0.53□□□□□ -2.32
Lire1P11260 Gm25633-201ENSMUST00000178565 107 ntBASIC0.53□□□□□ -2.32
Lire1P11260 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
Lire1P11260 Gm45471-201ENSMUST00000211270 281 ntBASIC0.53□□□□□ -2.32
Lire1P11260 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.53□□□□□ -2.32
Lire1P11260 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.53□□□□□ -2.32
Lire1P11260 AC164117.2-201ENSMUST00000222090 327 ntBASIC0.53□□□□□ -2.32
Lire1P11260 Gm24453-201ENSMUST00000083346 76 ntBASIC0.53□□□□□ -2.32
Lire1P11260 AC160984.1-201ENSMUST00000225855 3154 ntBASIC0.53□□□□□ -2.33
Lire1P11260 Snord89-201ENSMUST00000104516 110 ntBASIC0.52□□□□□ -2.33
Lire1P11260 Gm24501-201ENSMUST00000158452 62 ntBASIC0.52□□□□□ -2.33
Lire1P11260 Gm16539-201ENSMUST00000160086 327 ntBASIC0.52□□□□□ -2.33
Lire1P11260 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.52□□□□□ -2.33
Lire1P11260 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC0.52□□□□□ -2.33
Lire1P11260 Gm23186-201ENSMUST00000180078 107 ntBASIC0.52□□□□□ -2.33
Lire1P11260 Gm27289-201ENSMUST00000183341 82 ntBASIC0.52□□□□□ -2.33
Lire1P11260 Gm29665-201ENSMUST00000191457 528 ntBASIC0.52□□□□□ -2.33
Lire1P11260 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC0.52□□□□□ -2.33
Lire1P11260 Gm22302-201ENSMUST00000082657 106 ntBASIC0.52□□□□□ -2.33
Lire1P11260 Gm24258-201ENSMUST00000083739 133 ntBASIC0.52□□□□□ -2.33
Lire1P11260 Gm24963-201ENSMUST00000157916 144 ntBASIC0.51□□□□□ -2.33
Lire1P11260 Gm23024-201ENSMUST00000158770 292 ntBASIC0.51□□□□□ -2.33
Lire1P11260 Gm30155-201ENSMUST00000223458 339 ntBASIC0.51□□□□□ -2.33
Lire1P11260 Gm24616-201ENSMUST00000083274 139 ntBASIC0.51□□□□□ -2.33
Lire1P11260 Gm24385-201ENSMUST00000122694 350 ntBASIC0.5□□□□□ -2.33
Lire1P11260 Gm23640-201ENSMUST00000157860 104 ntBASIC0.5□□□□□ -2.33
Lire1P11260 Gm23853-201ENSMUST00000158375 104 ntBASIC0.5□□□□□ -2.33
Lire1P11260 Gm24772-201ENSMUST00000158507 110 ntBASIC0.5□□□□□ -2.33
Lire1P11260 Gm38109-201ENSMUST00000195386 181 ntBASIC0.5□□□□□ -2.33
Lire1P11260 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.5□□□□□ -2.33
Lire1P11260 AC166341.3-201ENSMUST00000221861 114 ntBASIC0.5□□□□□ -2.33
Lire1P11260 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
Lire1P11260 Gm25538-201ENSMUST00000101943 107 ntBASIC0.49□□□□□ -2.33
Lire1P11260 Gm22032-201ENSMUST00000116946 116 ntBASIC0.49□□□□□ -2.33
Lire1P11260 Gm6985-201ENSMUST00000121255 271 ntBASIC0.49□□□□□ -2.33
Lire1P11260 Gm6272-201ENSMUST00000121256 171 ntBASIC0.49□□□□□ -2.33
Lire1P11260 Gm25247-201ENSMUST00000175475 90 ntBASIC0.49□□□□□ -2.33
Lire1P11260 Gm29512-201ENSMUST00000185544 315 ntBASIC0.49□□□□□ -2.33
Lire1P11260 Gm28669-201ENSMUST00000188400 100 ntBASIC0.49□□□□□ -2.33
Lire1P11260 Gm28211-201ENSMUST00000190920 315 ntBASIC0.49□□□□□ -2.33
Lire1P11260 Gm24527-201ENSMUST00000082920 107 ntBASIC0.49□□□□□ -2.33
Lire1P11260 Mir30a-201ENSMUST00000083471 71 ntBASIC0.49□□□□□ -2.33
Lire1P11260 CT030170.3-201ENSMUST00000221205 1815 ntBASIC0.48□□□□□ -2.33
Lire1P11260 Gm23708-201ENSMUST00000104367 123 ntBASIC0.48□□□□□ -2.33
Lire1P11260 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC0.48□□□□□ -2.33
Lire1P11260 Gm24345-201ENSMUST00000158706 124 ntBASIC0.48□□□□□ -2.33
Lire1P11260 Gm25138-201ENSMUST00000083248 136 ntBASIC0.48□□□□□ -2.33
Lire1P11260 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.48□□□□□ -2.33
Lire1P11260 Mir1197-201ENSMUST00000117037 120 ntBASIC0.47□□□□□ -2.33
Lire1P11260 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC0.47□□□□□ -2.33
Lire1P11260 Gm23605-201ENSMUST00000157255 127 ntBASIC0.47□□□□□ -2.33
Lire1P11260 Gm25393-201ENSMUST00000157336 285 ntBASIC0.47□□□□□ -2.33
Lire1P11260 Gm24737-201ENSMUST00000158861 100 ntBASIC0.47□□□□□ -2.33
Lire1P11260 Gm22801-201ENSMUST00000175624 84 ntBASIC0.47□□□□□ -2.33
Lire1P11260 Gm25615-201ENSMUST00000177836 94 ntBASIC0.47□□□□□ -2.33
Lire1P11260 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.47□□□□□ -2.33
Lire1P11260 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
Lire1P11260 Gm24275-201ENSMUST00000116780 146 ntBASIC0.46□□□□□ -2.34
Lire1P11260 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
Lire1P11260 Gm12771-201ENSMUST00000120246 135 ntBASIC0.46□□□□□ -2.34
Lire1P11260 Gm13801-201ENSMUST00000120750 160 ntBASIC0.46□□□□□ -2.34
Lire1P11260 Gm14671-201ENSMUST00000121790 262 ntBASIC0.46□□□□□ -2.34
Lire1P11260 Gm26479-201ENSMUST00000122620 106 ntBASIC0.46□□□□□ -2.34
Lire1P11260 Gm45544-201ENSMUST00000211130 88 ntBASIC0.46□□□□□ -2.34
Lire1P11260 Gm22759-201ENSMUST00000102276 96 ntBASIC0.45□□□□□ -2.34
Lire1P11260 Gm14884-201ENSMUST00000120456 196 ntBASIC0.45□□□□□ -2.34
Lire1P11260 Gm13725-201ENSMUST00000122139 207 ntBASIC0.45□□□□□ -2.34
Lire1P11260 Gm22984-201ENSMUST00000122751 122 ntBASIC0.45□□□□□ -2.34
Lire1P11260 Gm27723-201ENSMUST00000157398 63 ntBASIC0.45□□□□□ -2.34
Lire1P11260 Gm22163-201ENSMUST00000158408 135 ntBASIC0.45□□□□□ -2.34
Lire1P11260 Gm16307-201ENSMUST00000161269 210 ntBASIC0.45□□□□□ -2.34
Lire1P11260 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC0.45□□□□□ -2.34
Lire1P11260 Gm44959-201ENSMUST00000209127 231 ntBASIC0.45□□□□□ -2.34
Lire1P11260 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC0.45□□□□□ -2.34
Lire1P11260 Gm24204-201ENSMUST00000082950 107 ntBASIC0.45□□□□□ -2.34
Lire1P11260 Snora19-201ENSMUST00000082962 132 ntBASIC0.45□□□□□ -2.34
Lire1P11260 Gm23658-201ENSMUST00000083233 132 ntBASIC0.45□□□□□ -2.34
Lire1P11260 Gm16546-201ENSMUST00000159442 355 ntBASIC0.44□□□□□ -2.34
Lire1P11260 Gm23416-201ENSMUST00000175520 95 ntBASIC0.44□□□□□ -2.34
Lire1P11260 Gm22118-201ENSMUST00000175593 171 ntBASIC0.44□□□□□ -2.34
Lire1P11260 Gm26073-201ENSMUST00000179906 127 ntBASIC0.44□□□□□ -2.34
Lire1P11260 Gm37404-201ENSMUST00000195726 359 ntBASIC0.44□□□□□ -2.34
Lire1P11260 Gm43563-201ENSMUST00000196761 198 ntBASIC0.44□□□□□ -2.34
Lire1P11260 Gm44828-201ENSMUST00000203745 106 ntBASIC0.44□□□□□ -2.34
Lire1P11260 Gm8219-201ENSMUST00000218309 242 ntBASIC0.44□□□□□ -2.34
Lire1P11260 Gm26326-201ENSMUST00000083070 129 ntBASIC0.44□□□□□ -2.34
Lire1P11260 Mir451a-201ENSMUST00000093557 72 ntBASIC0.44□□□□□ -2.34
Lire1P11260 Mir500-201ENSMUST00000093600 92 ntBASIC0.44□□□□□ -2.34
Lire1P11260 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.43□□□□□ -2.34
Lire1P11260 Gm22553-201ENSMUST00000157797 295 ntBASIC0.43□□□□□ -2.34
Lire1P11260 Gm22097-201ENSMUST00000157929 278 ntBASIC0.43□□□□□ -2.34
Lire1P11260 Gm22387-201ENSMUST00000158191 131 ntBASIC0.43□□□□□ -2.34
Lire1P11260 Gm27607-201ENSMUST00000185162 122 ntBASIC0.43□□□□□ -2.34
Lire1P11260 Gm44488-201ENSMUST00000199467 119 ntBASIC0.43□□□□□ -2.34
Lire1P11260 Gm44858-201ENSMUST00000207360 154 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms