Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm26434-201ENSMUST00000179778 79 ntBASIC1.88□□□□□ -2.11
Col3a1P08121 Gm25741-201ENSMUST00000179825 79 ntBASIC1.88□□□□□ -2.11
Col3a1P08121 Gm24759-201ENSMUST00000179827 79 ntBASIC1.88□□□□□ -2.11
Col3a1P08121 Gm24219-201ENSMUST00000179861 79 ntBASIC1.88□□□□□ -2.11
Col3a1P08121 Gm27582-201ENSMUST00000184084 126 ntBASIC1.88□□□□□ -2.11
Col3a1P08121 Gm6060-201ENSMUST00000188671 251 ntBASIC1.88□□□□□ -2.11
Col3a1P08121 Gm18546-201ENSMUST00000197245 676 ntBASIC1.88□□□□□ -2.11
Col3a1P08121 Gm25006-201ENSMUST00000083813 107 ntBASIC1.88□□□□□ -2.11
Col3a1P08121 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Col3a1P08121 Gm23254-201ENSMUST00000097244 79 ntBASIC1.88□□□□□ -2.11
Col3a1P08121 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
Col3a1P08121 Snord64-201ENSMUST00000104003 67 ntBASIC1.88□□□□□ -2.11
Col3a1P08121 Gm26301-201ENSMUST00000104813 95 ntBASIC1.88□□□□□ -2.11
Col3a1P08121 Gm14536-201ENSMUST00000118324 138 ntBASIC1.88□□□□□ -2.11
Col3a1P08121 Gm15027-201ENSMUST00000120922 138 ntBASIC1.88□□□□□ -2.11
Col3a1P08121 Gm15365-201ENSMUST00000122392 300 ntBASIC1.88□□□□□ -2.11
Col3a1P08121 Gm24650-201ENSMUST00000157105 103 ntBASIC1.88□□□□□ -2.11
Col3a1P08121 Gm23535-201ENSMUST00000157542 106 ntBASIC1.88□□□□□ -2.11
Col3a1P08121 Gm22612-201ENSMUST00000158293 101 ntBASIC1.88□□□□□ -2.11
Col3a1P08121 Gm24634-201ENSMUST00000158672 107 ntBASIC1.88□□□□□ -2.11
Col3a1P08121 Gm24878-201ENSMUST00000158782 104 ntBASIC1.88□□□□□ -2.11
Col3a1P08121 Gm22527-201ENSMUST00000158816 106 ntBASIC1.88□□□□□ -2.11
Col3a1P08121 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Col3a1P08121 Gm22070-201ENSMUST00000178475 107 ntBASIC1.88□□□□□ -2.11
Col3a1P08121 Gm25646-201ENSMUST00000178527 79 ntBASIC1.88□□□□□ -2.11
Col3a1P08121 Mir7217-201ENSMUST00000200304 62 ntBASIC1.88□□□□□ -2.11
Col3a1P08121 Gm42739-201ENSMUST00000200687 226 ntBASIC1.88□□□□□ -2.11
Col3a1P08121 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.88□□□□□ -2.11
Col3a1P08121 Gm25797-201ENSMUST00000082640 107 ntBASIC1.88□□□□□ -2.11
Col3a1P08121 Snord61-201ENSMUST00000083176 71 ntBASIC1.88□□□□□ -2.11
Col3a1P08121 Mir218-1-201ENSMUST00000083669 110 ntBASIC1.88□□□□□ -2.11
Col3a1P08121 Gm25022-201ENSMUST00000102205 83 ntBASIC1.87□□□□□ -2.11
Col3a1P08121 Gm24894-201ENSMUST00000122744 118 ntBASIC1.87□□□□□ -2.11
Col3a1P08121 Gm26084-201ENSMUST00000157903 104 ntBASIC1.87□□□□□ -2.11
Col3a1P08121 Gm23194-201ENSMUST00000158813 105 ntBASIC1.87□□□□□ -2.11
Col3a1P08121 Mir467a-6-201ENSMUST00000177790 83 ntBASIC1.87□□□□□ -2.11
Col3a1P08121 Mir467a-3-201ENSMUST00000178082 83 ntBASIC1.87□□□□□ -2.11
Col3a1P08121 Mir467a-7-201ENSMUST00000178635 83 ntBASIC1.87□□□□□ -2.11
Col3a1P08121 Mir467a-10-201ENSMUST00000179320 83 ntBASIC1.87□□□□□ -2.11
Col3a1P08121 Mir467a-5-201ENSMUST00000179352 83 ntBASIC1.87□□□□□ -2.11
Col3a1P08121 Mir467a-2-201ENSMUST00000179447 83 ntBASIC1.87□□□□□ -2.11
Col3a1P08121 Mir467a-9-201ENSMUST00000179752 83 ntBASIC1.87□□□□□ -2.11
Col3a1P08121 Mir467a-4-201ENSMUST00000179923 83 ntBASIC1.87□□□□□ -2.11
Col3a1P08121 Mir467a-8-201ENSMUST00000180070 83 ntBASIC1.87□□□□□ -2.11
Col3a1P08121 Gm27248-201ENSMUST00000184004 166 ntBASIC1.87□□□□□ -2.11
Col3a1P08121 Gm44476-201ENSMUST00000196225 91 ntBASIC1.87□□□□□ -2.11
Col3a1P08121 AC122194.1-201ENSMUST00000220549 293 ntBASIC1.87□□□□□ -2.11
Col3a1P08121 Gm11351-202ENSMUST00000225724 478 ntBASIC1.87□□□□□ -2.11
Col3a1P08121 Gm43877-201ENSMUST00000205029 2238 ntBASIC1.86□□□□□ -2.11
Col3a1P08121 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Col3a1P08121 Gm22004-201ENSMUST00000101884 107 ntBASIC1.86□□□□□ -2.11
Col3a1P08121 Gm26011-201ENSMUST00000104410 104 ntBASIC1.86□□□□□ -2.11
Col3a1P08121 Gm15214-201ENSMUST00000122155 470 ntBASIC1.86□□□□□ -2.11
Col3a1P08121 Gm25059-201ENSMUST00000157367 117 ntBASIC1.86□□□□□ -2.11
Col3a1P08121 Gm25060-201ENSMUST00000157374 130 ntBASIC1.86□□□□□ -2.11
Col3a1P08121 Gm25958-201ENSMUST00000175114 71 ntBASIC1.86□□□□□ -2.11
Col3a1P08121 Mir7667-201ENSMUST00000183866 63 ntBASIC1.86□□□□□ -2.11
Col3a1P08121 Gm20058-201ENSMUST00000186939 284 ntBASIC1.86□□□□□ -2.11
Col3a1P08121 Gm6801-201ENSMUST00000190697 339 ntBASIC1.86□□□□□ -2.11
Col3a1P08121 AC161758.2-201ENSMUST00000228513 218 ntBASIC1.86□□□□□ -2.11
Col3a1P08121 Gm26493-201ENSMUST00000083155 136 ntBASIC1.86□□□□□ -2.11
Col3a1P08121 Mir369-201ENSMUST00000083627 79 ntBASIC1.86□□□□□ -2.11
Col3a1P08121 Gm38162-201ENSMUST00000195562 4597 ntBASIC1.85□□□□□ -2.11
Col3a1P08121 Gm37566-201ENSMUST00000192363 4355 ntBASIC1.85□□□□□ -2.11
Col3a1P08121 n-R5s26-201ENSMUST00000104601 122 ntBASIC1.85□□□□□ -2.11
Col3a1P08121 Gm25625-201ENSMUST00000157221 96 ntBASIC1.85□□□□□ -2.11
Col3a1P08121 Gm24908-201ENSMUST00000157294 127 ntBASIC1.85□□□□□ -2.11
Col3a1P08121 Gm23718-201ENSMUST00000157350 307 ntBASIC1.85□□□□□ -2.11
Col3a1P08121 Gm23559-201ENSMUST00000157824 103 ntBASIC1.85□□□□□ -2.11
Col3a1P08121 Gm27934-201ENSMUST00000158795 63 ntBASIC1.85□□□□□ -2.11
Col3a1P08121 Gm23504-201ENSMUST00000158988 95 ntBASIC1.85□□□□□ -2.11
Col3a1P08121 Mir6351-201ENSMUST00000183826 99 ntBASIC1.85□□□□□ -2.11
Col3a1P08121 Gm28647-201ENSMUST00000188416 197 ntBASIC1.85□□□□□ -2.11
Col3a1P08121 Mir6962-201ENSMUST00000199512 63 ntBASIC1.85□□□□□ -2.11
Col3a1P08121 Gm44932-201ENSMUST00000206799 121 ntBASIC1.85□□□□□ -2.11
Col3a1P08121 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC1.85□□□□□ -2.11
Col3a1P08121 AC124524.1-201ENSMUST00000225833 181 ntBASIC1.85□□□□□ -2.11
Col3a1P08121 AC164164.1-201ENSMUST00000223245 2340 ntBASIC1.85□□□□□ -2.11
Col3a1P08121 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.84□□□□□ -2.11
Col3a1P08121 AC160984.1-201ENSMUST00000225855 3154 ntBASIC1.84□□□□□ -2.11
Col3a1P08121 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Col3a1P08121 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Col3a1P08121 Gm22558-201ENSMUST00000157326 95 ntBASIC1.84□□□□□ -2.11
Col3a1P08121 Gm24747-201ENSMUST00000157835 87 ntBASIC1.84□□□□□ -2.11
Col3a1P08121 Gm22429-201ENSMUST00000158553 130 ntBASIC1.84□□□□□ -2.11
Col3a1P08121 Gm24154-201ENSMUST00000175261 130 ntBASIC1.84□□□□□ -2.11
Col3a1P08121 Mir669j-201ENSMUST00000179023 121 ntBASIC1.84□□□□□ -2.11
Col3a1P08121 Gm38364-201ENSMUST00000191814 179 ntBASIC1.84□□□□□ -2.11
Col3a1P08121 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.84□□□□□ -2.11
Col3a1P08121 AC158597.1-201ENSMUST00000216234 150 ntBASIC1.84□□□□□ -2.11
Col3a1P08121 mt-Ta-201ENSMUST00000082398 69 ntBASIC1.84□□□□□ -2.11
Col3a1P08121 Gm23445-201ENSMUST00000082800 107 ntBASIC1.84□□□□□ -2.11
Col3a1P08121 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Col3a1P08121 Gm12432-201ENSMUST00000119540 186 ntBASIC1.83□□□□□ -2.12
Col3a1P08121 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Col3a1P08121 Gm23558-201ENSMUST00000157823 80 ntBASIC1.83□□□□□ -2.12
Col3a1P08121 Gm22708-201ENSMUST00000158987 103 ntBASIC1.83□□□□□ -2.12
Col3a1P08121 CT033781.2-201ENSMUST00000221113 153 ntBASIC1.83□□□□□ -2.12
Col3a1P08121 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Col3a1P08121 Gm22193-201ENSMUST00000116868 76 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 187.5 ms