Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm24616-201ENSMUST00000083274 139 ntBASIC0.43□□□□□ -2.34
TnfP06804 Gm23024-201ENSMUST00000158770 292 ntBASIC0.42□□□□□ -2.34
TnfP06804 Gm43563-201ENSMUST00000196761 198 ntBASIC0.42□□□□□ -2.34
TnfP06804 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.42□□□□□ -2.34
TnfP06804 Gm44488-201ENSMUST00000199467 119 ntBASIC0.42□□□□□ -2.34
TnfP06804 Gm44959-201ENSMUST00000209127 231 ntBASIC0.42□□□□□ -2.34
TnfP06804 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC0.42□□□□□ -2.34
TnfP06804 CT010454.1-201ENSMUST00000225975 265 ntBASIC0.42□□□□□ -2.34
TnfP06804 Mir181a-1-201ENSMUST00000083631 87 ntBASIC0.42□□□□□ -2.34
TnfP06804 Mir500-201ENSMUST00000093600 92 ntBASIC0.42□□□□□ -2.34
TnfP06804 Gm22786-201ENSMUST00000104086 122 ntBASIC0.41□□□□□ -2.34
TnfP06804 AC129085.1-201ENSMUST00000225263 165 ntBASIC0.41□□□□□ -2.34
TnfP06804 Gm24204-201ENSMUST00000082950 107 ntBASIC0.41□□□□□ -2.34
TnfP06804 Gm24316-201ENSMUST00000083041 107 ntBASIC0.41□□□□□ -2.34
TnfP06804 Gm24453-201ENSMUST00000083346 76 ntBASIC0.41□□□□□ -2.34
TnfP06804 Mir451a-201ENSMUST00000093557 72 ntBASIC0.41□□□□□ -2.34
TnfP06804 Gm22032-201ENSMUST00000116946 116 ntBASIC0.4□□□□□ -2.35
TnfP06804 Gm26274-201ENSMUST00000157103 321 ntBASIC0.4□□□□□ -2.35
TnfP06804 Gm29665-201ENSMUST00000191457 528 ntBASIC0.4□□□□□ -2.35
TnfP06804 Gm30155-201ENSMUST00000223458 339 ntBASIC0.4□□□□□ -2.35
TnfP06804 Gm25138-201ENSMUST00000083248 136 ntBASIC0.4□□□□□ -2.35
TnfP06804 Gm25793-201ENSMUST00000083287 107 ntBASIC0.4□□□□□ -2.35
TnfP06804 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.4□□□□□ -2.35
TnfP06804 Gm25538-201ENSMUST00000101943 107 ntBASIC0.39□□□□□ -2.35
TnfP06804 Gm25878-201ENSMUST00000104327 93 ntBASIC0.39□□□□□ -2.35
TnfP06804 Gm14946-201ENSMUST00000119859 296 ntBASIC0.39□□□□□ -2.35
TnfP06804 Gm22097-201ENSMUST00000157929 278 ntBASIC0.39□□□□□ -2.35
TnfP06804 Gm29512-201ENSMUST00000185544 315 ntBASIC0.39□□□□□ -2.35
TnfP06804 Gm37313-201ENSMUST00000191673 290 ntBASIC0.39□□□□□ -2.35
TnfP06804 Gm45544-201ENSMUST00000211130 88 ntBASIC0.39□□□□□ -2.35
TnfP06804 Snora20-201ENSMUST00000082703 128 ntBASIC0.39□□□□□ -2.35
TnfP06804 Snora19-201ENSMUST00000082962 132 ntBASIC0.39□□□□□ -2.35
TnfP06804 Gm23658-201ENSMUST00000083233 132 ntBASIC0.39□□□□□ -2.35
TnfP06804 Gm14301-201ENSMUST00000120181 324 ntBASIC0.38□□□□□ -2.35
TnfP06804 Gm13801-201ENSMUST00000120750 160 ntBASIC0.38□□□□□ -2.35
TnfP06804 Gm14671-201ENSMUST00000121790 262 ntBASIC0.38□□□□□ -2.35
TnfP06804 Gm27723-201ENSMUST00000157398 63 ntBASIC0.38□□□□□ -2.35
TnfP06804 Gm22801-201ENSMUST00000175624 84 ntBASIC0.38□□□□□ -2.35
TnfP06804 Gm25615-201ENSMUST00000177836 94 ntBASIC0.38□□□□□ -2.35
TnfP06804 Gm38183-201ENSMUST00000193189 205 ntBASIC0.38□□□□□ -2.35
TnfP06804 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC0.38□□□□□ -2.35
TnfP06804 Gm23969-201ENSMUST00000083324 74 ntBASIC0.38□□□□□ -2.35
TnfP06804 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
TnfP06804 CT030170.3-201ENSMUST00000221205 1815 ntBASIC0.37□□□□□ -2.35
TnfP06804 Gm22709-201ENSMUST00000116893 111 ntBASIC0.37□□□□□ -2.35
TnfP06804 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
TnfP06804 Gm26415-201ENSMUST00000157673 292 ntBASIC0.37□□□□□ -2.35
TnfP06804 Gm26090-201ENSMUST00000157897 128 ntBASIC0.37□□□□□ -2.35
TnfP06804 Gm23853-201ENSMUST00000158375 104 ntBASIC0.37□□□□□ -2.35
TnfP06804 Mir6350-201ENSMUST00000183639 105 ntBASIC0.37□□□□□ -2.35
TnfP06804 Mir6389-201ENSMUST00000183661 102 ntBASIC0.37□□□□□ -2.35
TnfP06804 AC159896.1-201ENSMUST00000215264 215 ntBASIC0.37□□□□□ -2.35
TnfP06804 Gm22759-201ENSMUST00000102276 96 ntBASIC0.36□□□□□ -2.35
TnfP06804 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC0.36□□□□□ -2.35
TnfP06804 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
TnfP06804 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC0.36□□□□□ -2.35
TnfP06804 Gm26479-201ENSMUST00000122620 106 ntBASIC0.36□□□□□ -2.35
TnfP06804 Gm24015-201ENSMUST00000157725 232 ntBASIC0.36□□□□□ -2.35
TnfP06804 Gm22553-201ENSMUST00000157797 295 ntBASIC0.36□□□□□ -2.35
TnfP06804 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC0.36□□□□□ -2.35
TnfP06804 AC164117.2-201ENSMUST00000222090 327 ntBASIC0.36□□□□□ -2.35
TnfP06804 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
TnfP06804 Gm15030-201ENSMUST00000119804 484 ntBASIC0.35□□□□□ -2.35
TnfP06804 Gm22984-201ENSMUST00000122751 122 ntBASIC0.35□□□□□ -2.35
TnfP06804 Gm25393-201ENSMUST00000157336 285 ntBASIC0.35□□□□□ -2.35
TnfP06804 Gm23783-201ENSMUST00000157941 102 ntBASIC0.35□□□□□ -2.35
TnfP06804 Mir1933-201ENSMUST00000158930 88 ntBASIC0.35□□□□□ -2.35
TnfP06804 Gm16307-201ENSMUST00000161269 210 ntBASIC0.35□□□□□ -2.35
TnfP06804 Mir7079-201ENSMUST00000184697 69 ntBASIC0.35□□□□□ -2.35
TnfP06804 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC0.35□□□□□ -2.35
TnfP06804 Gm44211-201ENSMUST00000204867 145 ntBASIC0.35□□□□□ -2.35
TnfP06804 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.35□□□□□ -2.35
TnfP06804 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.34□□□□□ -2.36
TnfP06804 Gm13725-201ENSMUST00000122139 207 ntBASIC0.34□□□□□ -2.36
TnfP06804 Gm24737-201ENSMUST00000158861 100 ntBASIC0.34□□□□□ -2.36
TnfP06804 Gm38109-201ENSMUST00000195386 181 ntBASIC0.34□□□□□ -2.36
TnfP06804 Gm44462-201ENSMUST00000199696 129 ntBASIC0.34□□□□□ -2.36
TnfP06804 Gm8219-201ENSMUST00000218309 242 ntBASIC0.34□□□□□ -2.36
TnfP06804 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.34□□□□□ -2.36
TnfP06804 CT010505.1-201ENSMUST00000227026 396 ntBASIC0.34□□□□□ -2.36
TnfP06804 Gm26326-201ENSMUST00000083070 129 ntBASIC0.34□□□□□ -2.36
TnfP06804 Gm23347-201ENSMUST00000083823 82 ntBASIC0.34□□□□□ -2.36
TnfP06804 Gm25787-201ENSMUST00000104709 92 ntBASIC0.33□□□□□ -2.36
TnfP06804 Gm6985-201ENSMUST00000121255 271 ntBASIC0.33□□□□□ -2.36
TnfP06804 Gm22387-201ENSMUST00000158191 131 ntBASIC0.33□□□□□ -2.36
TnfP06804 Gm24634-201ENSMUST00000158672 107 ntBASIC0.33□□□□□ -2.36
TnfP06804 Gm23416-201ENSMUST00000175520 95 ntBASIC0.33□□□□□ -2.36
TnfP06804 Gm22118-201ENSMUST00000175593 171 ntBASIC0.33□□□□□ -2.36
TnfP06804 Gm25633-201ENSMUST00000178565 107 ntBASIC0.33□□□□□ -2.36
TnfP06804 Gm44055-201ENSMUST00000204376 247 ntBASIC0.33□□□□□ -2.36
TnfP06804 AC160984.1-201ENSMUST00000225855 3154 ntBASIC0.33□□□□□ -2.36
TnfP06804 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
TnfP06804 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
TnfP06804 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
TnfP06804 Mir759-201ENSMUST00000103254 98 ntBASIC0.32□□□□□ -2.36
TnfP06804 Gm24275-201ENSMUST00000116780 146 ntBASIC0.32□□□□□ -2.36
TnfP06804 Gm24963-201ENSMUST00000157916 144 ntBASIC0.32□□□□□ -2.36
TnfP06804 Mir5624-201ENSMUST00000176635 61 ntBASIC0.32□□□□□ -2.36
TnfP06804 AC166341.3-201ENSMUST00000221861 114 ntBASIC0.32□□□□□ -2.36
TnfP06804 Mir30a-201ENSMUST00000083471 71 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms