Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Mir186-201ENSMUST00000083497 71 ntBASIC1.73□□□□□ -2.13
Best1O88870 Mir302d-201ENSMUST00000083513 66 ntBASIC1.73□□□□□ -2.13
Best1O88870 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.72□□□□□ -2.13
Best1O88870 Gm24015-201ENSMUST00000157725 232 ntBASIC1.72□□□□□ -2.13
Best1O88870 Gm22163-201ENSMUST00000158408 135 ntBASIC1.72□□□□□ -2.13
Best1O88870 Gm27544-201ENSMUST00000185069 155 ntBASIC1.72□□□□□ -2.13
Best1O88870 Mir3569-201ENSMUST00000185080 58 ntBASIC1.72□□□□□ -2.13
Best1O88870 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC1.72□□□□□ -2.13
Best1O88870 Gm16976-205ENSMUST00000227324 226 ntBASIC1.72□□□□□ -2.13
Best1O88870 Gm23461-201ENSMUST00000083265 107 ntBASIC1.72□□□□□ -2.13
Best1O88870 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Best1O88870 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.71□□□□□ -2.14
Best1O88870 Gm26293-201ENSMUST00000104170 84 ntBASIC1.71□□□□□ -2.14
Best1O88870 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Best1O88870 Gm25828-201ENSMUST00000157087 95 ntBASIC1.71□□□□□ -2.14
Best1O88870 Gm24345-201ENSMUST00000158706 124 ntBASIC1.71□□□□□ -2.14
Best1O88870 Gm24572-201ENSMUST00000175505 88 ntBASIC1.71□□□□□ -2.14
Best1O88870 Gm27285-201ENSMUST00000183875 127 ntBASIC1.71□□□□□ -2.14
Best1O88870 Gm29603-201ENSMUST00000186792 334 ntBASIC1.71□□□□□ -2.14
Best1O88870 Gm22283-201ENSMUST00000082556 161 ntBASIC1.71□□□□□ -2.14
Best1O88870 Snord96a-201ENSMUST00000082791 81 ntBASIC1.71□□□□□ -2.14
Best1O88870 Snord100-201ENSMUST00000116836 74 ntBASIC1.7□□□□□ -2.14
Best1O88870 Gm25949-201ENSMUST00000175333 114 ntBASIC1.7□□□□□ -2.14
Best1O88870 AC134601.1-201ENSMUST00000221058 109 ntBASIC1.7□□□□□ -2.14
Best1O88870 Gm24165-201ENSMUST00000082718 128 ntBASIC1.7□□□□□ -2.14
Best1O88870 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Best1O88870 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Best1O88870 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.69□□□□□ -2.14
Best1O88870 Gm26415-201ENSMUST00000157673 292 ntBASIC1.69□□□□□ -2.14
Best1O88870 Gm25838-201ENSMUST00000158920 120 ntBASIC1.69□□□□□ -2.14
Best1O88870 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.69□□□□□ -2.14
Best1O88870 Gm25855-201ENSMUST00000082787 72 ntBASIC1.69□□□□□ -2.14
Best1O88870 Gm24559-201ENSMUST00000157519 121 ntBASIC1.68□□□□□ -2.14
Best1O88870 Mir8090-201ENSMUST00000185078 136 ntBASIC1.68□□□□□ -2.14
Best1O88870 Gm28862-201ENSMUST00000188246 163 ntBASIC1.68□□□□□ -2.14
Best1O88870 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.68□□□□□ -2.14
Best1O88870 Gm44464-201ENSMUST00000198010 138 ntBASIC1.68□□□□□ -2.14
Best1O88870 Gm23299-201ENSMUST00000082708 79 ntBASIC1.68□□□□□ -2.14
Best1O88870 Gm25409-201ENSMUST00000083764 131 ntBASIC1.68□□□□□ -2.14
Best1O88870 Gm14567-201ENSMUST00000117155 174 ntBASIC1.67□□□□□ -2.14
Best1O88870 Gm22850-201ENSMUST00000157714 82 ntBASIC1.67□□□□□ -2.14
Best1O88870 Gm24770-201ENSMUST00000158505 92 ntBASIC1.66□□□□□ -2.14
Best1O88870 Gm22476-201ENSMUST00000158902 100 ntBASIC1.66□□□□□ -2.14
Best1O88870 Snord80-202ENSMUST00000199023 77 ntBASIC1.66□□□□□ -2.14
Best1O88870 Gm45002-201ENSMUST00000208045 120 ntBASIC1.66□□□□□ -2.14
Best1O88870 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.66□□□□□ -2.14
Best1O88870 Gm22761-201ENSMUST00000102278 96 ntBASIC1.65□□□□□ -2.15
Best1O88870 Gm26074-201ENSMUST00000104063 129 ntBASIC1.65□□□□□ -2.15
Best1O88870 Gm24984-201ENSMUST00000104454 133 ntBASIC1.65□□□□□ -2.15
Best1O88870 Gm24588-201ENSMUST00000116696 83 ntBASIC1.65□□□□□ -2.15
Best1O88870 Gm25279-201ENSMUST00000122608 133 ntBASIC1.65□□□□□ -2.15
Best1O88870 Gm23106-201ENSMUST00000157554 101 ntBASIC1.65□□□□□ -2.15
Best1O88870 Gm25663-201ENSMUST00000157698 135 ntBASIC1.65□□□□□ -2.15
Best1O88870 Gm22989-201ENSMUST00000158313 86 ntBASIC1.65□□□□□ -2.15
Best1O88870 Gm22665-201ENSMUST00000158720 275 ntBASIC1.65□□□□□ -2.15
Best1O88870 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.65□□□□□ -2.15
Best1O88870 Gm44408-201ENSMUST00000200205 66 ntBASIC1.65□□□□□ -2.15
Best1O88870 Gm18188-201ENSMUST00000219386 478 ntBASIC1.65□□□□□ -2.15
Best1O88870 Mir148b-201ENSMUST00000083626 97 ntBASIC1.65□□□□□ -2.15
Best1O88870 Mir654-201ENSMUST00000104787 84 ntBASIC1.64□□□□□ -2.15
Best1O88870 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.64□□□□□ -2.15
Best1O88870 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Best1O88870 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Best1O88870 Gm16404-201ENSMUST00000177739 468 ntBASIC1.64□□□□□ -2.15
Best1O88870 Gm14598-201ENSMUST00000180109 468 ntBASIC1.64□□□□□ -2.15
Best1O88870 Gm14625-201ENSMUST00000180231 468 ntBASIC1.64□□□□□ -2.15
Best1O88870 Gm37997-201ENSMUST00000193515 267 ntBASIC1.64□□□□□ -2.15
Best1O88870 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC1.64□□□□□ -2.15
Best1O88870 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Best1O88870 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC1.63□□□□□ -2.15
Best1O88870 Gm25985-201ENSMUST00000122677 107 ntBASIC1.63□□□□□ -2.15
Best1O88870 Gm24783-201ENSMUST00000157639 100 ntBASIC1.63□□□□□ -2.15
Best1O88870 Gm22551-201ENSMUST00000157795 103 ntBASIC1.63□□□□□ -2.15
Best1O88870 Traj60-201ENSMUST00000167781 54 ntBASIC1.63□□□□□ -2.15
Best1O88870 Gm20391-201ENSMUST00000174722 106 ntBASIC1.63□□□□□ -2.15
Best1O88870 Gm26073-201ENSMUST00000179906 127 ntBASIC1.63□□□□□ -2.15
Best1O88870 Gm44320-201ENSMUST00000199276 86 ntBASIC1.63□□□□□ -2.15
Best1O88870 Snora20-201ENSMUST00000082703 128 ntBASIC1.63□□□□□ -2.15
Best1O88870 Gm26204-201ENSMUST00000082906 107 ntBASIC1.63□□□□□ -2.15
Best1O88870 Gm25650-201ENSMUST00000083784 162 ntBASIC1.63□□□□□ -2.15
Best1O88870 Gm13345-201ENSMUST00000121928 228 ntBASIC1.62□□□□□ -2.15
Best1O88870 Gm22200-201ENSMUST00000158614 67 ntBASIC1.62□□□□□ -2.15
Best1O88870 Gm22802-201ENSMUST00000175621 89 ntBASIC1.62□□□□□ -2.15
Best1O88870 Gm16399-201ENSMUST00000181423 219 ntBASIC1.62□□□□□ -2.15
Best1O88870 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.62□□□□□ -2.15
Best1O88870 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
Best1O88870 Gm14568-201ENSMUST00000119321 294 ntBASIC1.61□□□□□ -2.15
Best1O88870 Gm24076-201ENSMUST00000158179 94 ntBASIC1.61□□□□□ -2.15
Best1O88870 Gm25364-201ENSMUST00000158851 107 ntBASIC1.61□□□□□ -2.15
Best1O88870 Snora24-201ENSMUST00000174989 130 ntBASIC1.61□□□□□ -2.15
Best1O88870 Gm27420-201ENSMUST00000183823 79 ntBASIC1.61□□□□□ -2.15
Best1O88870 Gm28383-201ENSMUST00000187563 139 ntBASIC1.61□□□□□ -2.15
Best1O88870 Gm37116-201ENSMUST00000195161 147 ntBASIC1.61□□□□□ -2.15
Best1O88870 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1.61□□□□□ -2.15
Best1O88870 Mir301b-201ENSMUST00000102333 97 ntBASIC1.6□□□□□ -2.15
Best1O88870 Gm26181-201ENSMUST00000157687 106 ntBASIC1.6□□□□□ -2.15
Best1O88870 Gm22556-201ENSMUST00000157803 100 ntBASIC1.6□□□□□ -2.15
Best1O88870 Gm26090-201ENSMUST00000157897 128 ntBASIC1.6□□□□□ -2.15
Best1O88870 Gm24638-201ENSMUST00000179807 132 ntBASIC1.6□□□□□ -2.15
Best1O88870 Gm37624-201ENSMUST00000193751 219 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms