Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm24342-201ENSMUST00000103907 104 ntBASIC-0.47□□□□□ -2.48
Hmgb3O54879 Gm14671-201ENSMUST00000121790 262 ntBASIC-0.47□□□□□ -2.48
Hmgb3O54879 Gm24509-201ENSMUST00000157086 101 ntBASIC-0.47□□□□□ -2.48
Hmgb3O54879 Gm25358-201ENSMUST00000157189 101 ntBASIC-0.47□□□□□ -2.48
Hmgb3O54879 Gm25444-201ENSMUST00000158999 113 ntBASIC-0.47□□□□□ -2.48
Hmgb3O54879 Gm28597-201ENSMUST00000187664 666 ntBASIC-0.47□□□□□ -2.48
Hmgb3O54879 Gm28330-201ENSMUST00000190353 171 ntBASIC-0.47□□□□□ -2.48
Hmgb3O54879 AC166358.10-201ENSMUST00000220556 144 ntBASIC-0.47□□□□□ -2.48
Hmgb3O54879 Gm23140-201ENSMUST00000082487 107 ntBASIC-0.47□□□□□ -2.48
Hmgb3O54879 Gm22771-201ENSMUST00000104449 91 ntBASIC-0.48□□□□□ -2.49
Hmgb3O54879 Gm12771-201ENSMUST00000120246 135 ntBASIC-0.48□□□□□ -2.49
Hmgb3O54879 Gm24847-201ENSMUST00000158032 108 ntBASIC-0.48□□□□□ -2.49
Hmgb3O54879 Gm22087-201ENSMUST00000158339 88 ntBASIC-0.48□□□□□ -2.49
Hmgb3O54879 Gm23660-201ENSMUST00000178362 79 ntBASIC-0.48□□□□□ -2.49
Hmgb3O54879 Gm24088-201ENSMUST00000179100 79 ntBASIC-0.48□□□□□ -2.49
Hmgb3O54879 Mir7661-201ENSMUST00000197023 61 ntBASIC-0.48□□□□□ -2.49
Hmgb3O54879 Mir376a-201ENSMUST00000197584 68 ntBASIC-0.48□□□□□ -2.49
Hmgb3O54879 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC-0.48□□□□□ -2.49
Hmgb3O54879 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC-0.48□□□□□ -2.49
Hmgb3O54879 AL627387.1-201ENSMUST00000226063 250 ntBASIC-0.48□□□□□ -2.49
Hmgb3O54879 Snora75-201ENSMUST00000082903 133 ntBASIC-0.48□□□□□ -2.49
Hmgb3O54879 Mir377-201ENSMUST00000083504 68 ntBASIC-0.48□□□□□ -2.49
Hmgb3O54879 Rny1-201ENSMUST00000083767 112 ntBASIC-0.48□□□□□ -2.49
Hmgb3O54879 Gm23142-201ENSMUST00000101848 105 ntBASIC-0.49□□□□□ -2.49
Hmgb3O54879 Gm26240-201ENSMUST00000101893 105 ntBASIC-0.49□□□□□ -2.49
Hmgb3O54879 Gm15719-201ENSMUST00000120619 635 ntBASIC-0.49□□□□□ -2.49
Hmgb3O54879 Gm14775-201ENSMUST00000122089 310 ntBASIC-0.49□□□□□ -2.49
Hmgb3O54879 Gm22387-201ENSMUST00000158191 131 ntBASIC-0.49□□□□□ -2.49
Hmgb3O54879 Gm10105-201ENSMUST00000184601 270 ntBASIC-0.49□□□□□ -2.49
Hmgb3O54879 Gm44464-201ENSMUST00000198010 138 ntBASIC-0.49□□□□□ -2.49
Hmgb3O54879 Gm22303-201ENSMUST00000082686 122 ntBASIC-0.49□□□□□ -2.49
Hmgb3O54879 Gm24043-201ENSMUST00000083108 116 ntBASIC-0.49□□□□□ -2.49
Hmgb3O54879 Mir18-201ENSMUST00000083469 96 ntBASIC-0.49□□□□□ -2.49
Hmgb3O54879 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC-0.49□□□□□ -2.49
Hmgb3O54879 Gm22656-201ENSMUST00000104199 171 ntBASIC-0.5□□□□□ -2.49
Hmgb3O54879 Gm24594-201ENSMUST00000122502 99 ntBASIC-0.5□□□□□ -2.49
Hmgb3O54879 Gm24379-201ENSMUST00000122695 86 ntBASIC-0.5□□□□□ -2.49
Hmgb3O54879 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.5□□□□□ -2.49
Hmgb3O54879 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC-0.5□□□□□ -2.49
Hmgb3O54879 Gm25241-201ENSMUST00000174909 84 ntBASIC-0.5□□□□□ -2.49
Hmgb3O54879 Gm26217-201ENSMUST00000175212 84 ntBASIC-0.5□□□□□ -2.49
Hmgb3O54879 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC-0.5□□□□□ -2.49
Hmgb3O54879 Gm25671-201ENSMUST00000178612 105 ntBASIC-0.5□□□□□ -2.49
Hmgb3O54879 Gm23307-201ENSMUST00000179167 105 ntBASIC-0.5□□□□□ -2.49
Hmgb3O54879 Gm25286-201ENSMUST00000179790 105 ntBASIC-0.5□□□□□ -2.49
Hmgb3O54879 Mir721-201ENSMUST00000200230 88 ntBASIC-0.5□□□□□ -2.49
Hmgb3O54879 Gm23301-201ENSMUST00000082713 65 ntBASIC-0.5□□□□□ -2.49
Hmgb3O54879 Gm26329-201ENSMUST00000093723 110 ntBASIC-0.5□□□□□ -2.49
Hmgb3O54879 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC-0.51□□□□□ -2.49
Hmgb3O54879 Gm24438-201ENSMUST00000157893 115 ntBASIC-0.51□□□□□ -2.49
Hmgb3O54879 Gm25375-201ENSMUST00000158157 135 ntBASIC-0.51□□□□□ -2.49
Hmgb3O54879 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.51□□□□□ -2.49
Hmgb3O54879 Gm44811-201ENSMUST00000209120 228 ntBASIC-0.51□□□□□ -2.49
Hmgb3O54879 Gm25078-201ENSMUST00000082530 107 ntBASIC-0.51□□□□□ -2.49
Hmgb3O54879 Gm10172-201ENSMUST00000085929 558 ntBASIC-0.51□□□□□ -2.49
Hmgb3O54879 Gm3867-201ENSMUST00000086108 279 ntBASIC-0.51□□□□□ -2.49
Hmgb3O54879 Gm22962-201ENSMUST00000157962 73 ntBASIC-0.52□□□□□ -2.49
Hmgb3O54879 Gm23921-201ENSMUST00000175258 107 ntBASIC-0.52□□□□□ -2.49
Hmgb3O54879 Gm27993-201ENSMUST00000184362 85 ntBASIC-0.52□□□□□ -2.49
Hmgb3O54879 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.52□□□□□ -2.49
Hmgb3O54879 AC132615.1-201ENSMUST00000213873 255 ntBASIC-0.52□□□□□ -2.49
Hmgb3O54879 AC102369.1-201ENSMUST00000218415 373 ntBASIC-0.52□□□□□ -2.49
Hmgb3O54879 AC154282.1-201ENSMUST00000223154 265 ntBASIC-0.52□□□□□ -2.49
Hmgb3O54879 AC115735.2-201ENSMUST00000227135 351 ntBASIC-0.52□□□□□ -2.49
Hmgb3O54879 Gm22981-201ENSMUST00000082611 75 ntBASIC-0.52□□□□□ -2.49
Hmgb3O54879 Gm25538-201ENSMUST00000101943 107 ntBASIC-0.53□□□□□ -2.49
Hmgb3O54879 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC-0.53□□□□□ -2.49
Hmgb3O54879 Gm15899-201ENSMUST00000128586 238 ntBASIC-0.53□□□□□ -2.49
Hmgb3O54879 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.53□□□□□ -2.49
Hmgb3O54879 Gm22814-201ENSMUST00000157452 104 ntBASIC-0.53□□□□□ -2.49
Hmgb3O54879 Gm23036-201ENSMUST00000157885 99 ntBASIC-0.53□□□□□ -2.49
Hmgb3O54879 Mir7079-201ENSMUST00000184697 69 ntBASIC-0.53□□□□□ -2.49
Hmgb3O54879 Gm27919-201ENSMUST00000185163 107 ntBASIC-0.53□□□□□ -2.49
Hmgb3O54879 AC116589.3-202ENSMUST00000221770 649 ntBASIC-0.53□□□□□ -2.49
Hmgb3O54879 AC116589.6-201ENSMUST00000222252 649 ntBASIC-0.53□□□□□ -2.49
Hmgb3O54879 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC-0.53□□□□□ -2.49
Hmgb3O54879 Gm23783-201ENSMUST00000157941 102 ntBASIC-0.54□□□□□ -2.5
Hmgb3O54879 Gm22841-201ENSMUST00000158443 62 ntBASIC-0.54□□□□□ -2.5
Hmgb3O54879 Gm23191-201ENSMUST00000179147 107 ntBASIC-0.54□□□□□ -2.5
Hmgb3O54879 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC-0.54□□□□□ -2.5
Hmgb3O54879 Gm38364-201ENSMUST00000191814 179 ntBASIC-0.54□□□□□ -2.5
Hmgb3O54879 Mir465d-201ENSMUST00000196314 58 ntBASIC-0.54□□□□□ -2.5
Hmgb3O54879 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC-0.54□□□□□ -2.5
Hmgb3O54879 Gm42857-201ENSMUST00000200823 339 ntBASIC-0.54□□□□□ -2.5
Hmgb3O54879 Gm25791-201ENSMUST00000083292 137 ntBASIC-0.54□□□□□ -2.5
Hmgb3O54879 Gm45265-201ENSMUST00000210852 2497 ntBASIC-0.54□□□□□ -2.5
Hmgb3O54879 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.55□□□□□ -2.5
Hmgb3O54879 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC-0.55□□□□□ -2.5
Hmgb3O54879 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC-0.55□□□□□ -2.5
Hmgb3O54879 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC-0.55□□□□□ -2.5
Hmgb3O54879 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.55□□□□□ -2.5
Hmgb3O54879 AC162857.1-201ENSMUST00000226614 400 ntBASIC-0.55□□□□□ -2.5
Hmgb3O54879 Gm14792-201ENSMUST00000119725 258 ntBASIC-0.56□□□□□ -2.5
Hmgb3O54879 Gm15213-201ENSMUST00000122098 216 ntBASIC-0.56□□□□□ -2.5
Hmgb3O54879 Gm23788-201ENSMUST00000122535 106 ntBASIC-0.56□□□□□ -2.5
Hmgb3O54879 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC-0.56□□□□□ -2.5
Hmgb3O54879 Gm14298-201ENSMUST00000139032 237 ntBASIC-0.56□□□□□ -2.5
Hmgb3O54879 Gm23994-201ENSMUST00000158059 88 ntBASIC-0.56□□□□□ -2.5
Hmgb3O54879 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.56□□□□□ -2.5
Hmgb3O54879 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC-0.56□□□□□ -2.5
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms