Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Gm14413-201ENSMUST00000122158 408 ntBASIC0.17□□□□□ -2.38
Chd3B1AR17 Gm24595-201ENSMUST00000122501 110 ntBASIC0.17□□□□□ -2.38
Chd3B1AR17 Gm24438-201ENSMUST00000157893 115 ntBASIC0.17□□□□□ -2.38
Chd3B1AR17 Gm6003-201ENSMUST00000187903 463 ntBASIC0.17□□□□□ -2.38
Chd3B1AR17 Gm44488-201ENSMUST00000199467 119 ntBASIC0.17□□□□□ -2.38
Chd3B1AR17 Gm44909-201ENSMUST00000208756 165 ntBASIC0.17□□□□□ -2.38
Chd3B1AR17 AC132615.1-201ENSMUST00000213873 255 ntBASIC0.17□□□□□ -2.38
Chd3B1AR17 Gm25855-201ENSMUST00000082787 72 ntBASIC0.17□□□□□ -2.38
Chd3B1AR17 Gm24035-201ENSMUST00000082867 107 ntBASIC0.17□□□□□ -2.38
Chd3B1AR17 Mir34a-201ENSMUST00000083559 102 ntBASIC0.17□□□□□ -2.38
Chd3B1AR17 Gm24164-201ENSMUST00000093663 104 ntBASIC0.17□□□□□ -2.38
Chd3B1AR17 Gm23474-201ENSMUST00000158884 75 ntBASIC0.16□□□□□ -2.38
Chd3B1AR17 Gm20391-201ENSMUST00000174722 106 ntBASIC0.16□□□□□ -2.38
Chd3B1AR17 Gm23191-201ENSMUST00000179147 107 ntBASIC0.16□□□□□ -2.38
Chd3B1AR17 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC0.16□□□□□ -2.38
Chd3B1AR17 Mir214-201ENSMUST00000083582 110 ntBASIC0.16□□□□□ -2.38
Chd3B1AR17 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
Chd3B1AR17 Snord69-201ENSMUST00000104024 80 ntBASIC0.15□□□□□ -2.38
Chd3B1AR17 Gm15289-201ENSMUST00000117793 244 ntBASIC0.15□□□□□ -2.38
Chd3B1AR17 Gm23853-201ENSMUST00000158375 104 ntBASIC0.15□□□□□ -2.38
Chd3B1AR17 Gm25241-201ENSMUST00000174909 84 ntBASIC0.15□□□□□ -2.38
Chd3B1AR17 Gm26217-201ENSMUST00000175212 84 ntBASIC0.15□□□□□ -2.38
Chd3B1AR17 Gm43472-201ENSMUST00000200175 154 ntBASIC0.15□□□□□ -2.38
Chd3B1AR17 AL935138.1-201ENSMUST00000215309 196 ntBASIC0.15□□□□□ -2.38
Chd3B1AR17 Gm25078-201ENSMUST00000082530 107 ntBASIC0.15□□□□□ -2.38
Chd3B1AR17 n-R5s73-201ENSMUST00000122508 107 ntBASIC0.15□□□□□ -2.39
Chd3B1AR17 Gm27610-201ENSMUST00000184026 74 ntBASIC0.15□□□□□ -2.39
Chd3B1AR17 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.15□□□□□ -2.39
Chd3B1AR17 CT485612.2-201ENSMUST00000223014 151 ntBASIC0.15□□□□□ -2.39
Chd3B1AR17 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC0.14□□□□□ -2.39
Chd3B1AR17 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC0.14□□□□□ -2.39
Chd3B1AR17 Gm28256-201ENSMUST00000188953 139 ntBASIC0.14□□□□□ -2.39
Chd3B1AR17 Gm28559-201ENSMUST00000190532 139 ntBASIC0.14□□□□□ -2.39
Chd3B1AR17 Mir654-201ENSMUST00000104787 84 ntBASIC0.13□□□□□ -2.39
Chd3B1AR17 Gm23982-201ENSMUST00000157141 106 ntBASIC0.13□□□□□ -2.39
Chd3B1AR17 Gm23182-201ENSMUST00000158688 135 ntBASIC0.13□□□□□ -2.39
Chd3B1AR17 Gm25052-201ENSMUST00000122661 158 ntBASIC0.12□□□□□ -2.39
Chd3B1AR17 Gm24880-201ENSMUST00000158776 85 ntBASIC0.12□□□□□ -2.39
Chd3B1AR17 Gm27475-201ENSMUST00000183420 61 ntBASIC0.12□□□□□ -2.39
Chd3B1AR17 Mir7065-201ENSMUST00000185110 61 ntBASIC0.12□□□□□ -2.39
Chd3B1AR17 AC154994.1-201ENSMUST00000217395 302 ntBASIC0.12□□□□□ -2.39
Chd3B1AR17 AC104832.1-201ENSMUST00000222938 550 ntBASIC0.12□□□□□ -2.39
Chd3B1AR17 Gm25204-201ENSMUST00000082843 106 ntBASIC0.12□□□□□ -2.39
Chd3B1AR17 Snord95-201ENSMUST00000082846 68 ntBASIC0.12□□□□□ -2.39
Chd3B1AR17 Mir547-201ENSMUST00000102051 78 ntBASIC0.12□□□□□ -2.39
Chd3B1AR17 Gm22595-201ENSMUST00000104250 130 ntBASIC0.12□□□□□ -2.39
Chd3B1AR17 Gm24547-201ENSMUST00000158649 149 ntBASIC0.12□□□□□ -2.39
Chd3B1AR17 Mir1966-201ENSMUST00000158807 108 ntBASIC0.12□□□□□ -2.39
Chd3B1AR17 Mir3108-201ENSMUST00000175500 79 ntBASIC0.12□□□□□ -2.39
Chd3B1AR17 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.12□□□□□ -2.39
Chd3B1AR17 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.12□□□□□ -2.39
Chd3B1AR17 Gm24278-201ENSMUST00000104239 127 ntBASIC0.11□□□□□ -2.39
Chd3B1AR17 Gm24000-201ENSMUST00000158063 89 ntBASIC0.11□□□□□ -2.39
Chd3B1AR17 Gm20257-202ENSMUST00000188643 130 ntBASIC0.11□□□□□ -2.39
Chd3B1AR17 Gm23614-201ENSMUST00000082598 107 ntBASIC0.11□□□□□ -2.39
Chd3B1AR17 Gm25414-201ENSMUST00000101814 107 ntBASIC0.1□□□□□ -2.39
Chd3B1AR17 Gm23584-201ENSMUST00000157655 129 ntBASIC0.1□□□□□ -2.39
Chd3B1AR17 Gm23838-201ENSMUST00000158067 162 ntBASIC0.1□□□□□ -2.39
Chd3B1AR17 Gm27884-201ENSMUST00000183865 76 ntBASIC0.1□□□□□ -2.39
Chd3B1AR17 Mir6342-201ENSMUST00000183870 125 ntBASIC0.1□□□□□ -2.39
Chd3B1AR17 Gm29229-201ENSMUST00000188874 323 ntBASIC0.1□□□□□ -2.39
Chd3B1AR17 Gm6607-201ENSMUST00000215035 328 ntBASIC0.1□□□□□ -2.39
Chd3B1AR17 Gm30155-201ENSMUST00000223458 339 ntBASIC0.1□□□□□ -2.39
Chd3B1AR17 Gm25558-201ENSMUST00000158083 106 ntBASIC0.1□□□□□ -2.39
Chd3B1AR17 Mir1933-201ENSMUST00000158930 88 ntBASIC0.1□□□□□ -2.39
Chd3B1AR17 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
Chd3B1AR17 Mir7010-201ENSMUST00000183464 63 ntBASIC0.1□□□□□ -2.39
Chd3B1AR17 Gm13711-201ENSMUST00000119708 453 ntBASIC0.09□□□□□ -2.39
Chd3B1AR17 Gm24847-201ENSMUST00000158032 108 ntBASIC0.09□□□□□ -2.39
Chd3B1AR17 Gm23761-201ENSMUST00000158347 104 ntBASIC0.09□□□□□ -2.39
Chd3B1AR17 Gm23113-201ENSMUST00000158477 99 ntBASIC0.09□□□□□ -2.39
Chd3B1AR17 Gm22888-201ENSMUST00000158640 77 ntBASIC0.09□□□□□ -2.39
Chd3B1AR17 Mir465d-201ENSMUST00000196314 58 ntBASIC0.09□□□□□ -2.39
Chd3B1AR17 Gm44948-201ENSMUST00000209050 149 ntBASIC0.09□□□□□ -2.39
Chd3B1AR17 Gm22421-201ENSMUST00000083058 107 ntBASIC0.09□□□□□ -2.39
Chd3B1AR17 Mir382-201ENSMUST00000083494 76 ntBASIC0.09□□□□□ -2.39
Chd3B1AR17 Gm12086-201ENSMUST00000120863 228 ntBASIC0.09□□□□□ -2.4
Chd3B1AR17 Gm14671-201ENSMUST00000121790 262 ntBASIC0.09□□□□□ -2.4
Chd3B1AR17 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC0.09□□□□□ -2.4
Chd3B1AR17 Gm22553-201ENSMUST00000157797 295 ntBASIC0.09□□□□□ -2.4
Chd3B1AR17 Gm23024-201ENSMUST00000158770 292 ntBASIC0.09□□□□□ -2.4
Chd3B1AR17 Gm26400-201ENSMUST00000175012 85 ntBASIC0.09□□□□□ -2.4
Chd3B1AR17 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC0.09□□□□□ -2.4
Chd3B1AR17 Gm6105-201ENSMUST00000200580 624 ntBASIC0.09□□□□□ -2.4
Chd3B1AR17 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.09□□□□□ -2.4
Chd3B1AR17 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.09□□□□□ -2.4
Chd3B1AR17 Gm25032-201ENSMUST00000175411 84 ntBASIC0.08□□□□□ -2.4
Chd3B1AR17 Gm28001-201ENSMUST00000183561 117 ntBASIC0.08□□□□□ -2.4
Chd3B1AR17 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC0.08□□□□□ -2.4
Chd3B1AR17 Gm38208-201ENSMUST00000192476 114 ntBASIC0.08□□□□□ -2.4
Chd3B1AR17 Gm37763-201ENSMUST00000193445 120 ntBASIC0.08□□□□□ -2.4
Chd3B1AR17 Gm44455-201ENSMUST00000200061 82 ntBASIC0.08□□□□□ -2.4
Chd3B1AR17 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC0.07□□□□□ -2.4
Chd3B1AR17 Gm24015-201ENSMUST00000157725 232 ntBASIC0.07□□□□□ -2.4
Chd3B1AR17 Gm25952-201ENSMUST00000175329 74 ntBASIC0.07□□□□□ -2.4
Chd3B1AR17 Gm25671-201ENSMUST00000178612 105 ntBASIC0.07□□□□□ -2.4
Chd3B1AR17 Gm23307-201ENSMUST00000179167 105 ntBASIC0.07□□□□□ -2.4
Chd3B1AR17 Gm25286-201ENSMUST00000179790 105 ntBASIC0.07□□□□□ -2.4
Chd3B1AR17 Gm23571-201ENSMUST00000180073 127 ntBASIC0.07□□□□□ -2.4
Chd3B1AR17 Gm28330-201ENSMUST00000190353 171 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms