Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm23170-201ENSMUST00000157158 106 ntBASIC1.19□□□□□ -2.22
H2afb2S4R1M3 Gm23665-201ENSMUST00000158054 62 ntBASIC1.19□□□□□ -2.22
H2afb2S4R1M3 Gm23898-201ENSMUST00000158111 103 ntBASIC1.19□□□□□ -2.22
H2afb2S4R1M3 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
H2afb2S4R1M3 Mir6350-201ENSMUST00000183639 105 ntBASIC1.19□□□□□ -2.22
H2afb2S4R1M3 Mir7063-201ENSMUST00000184158 91 ntBASIC1.19□□□□□ -2.22
H2afb2S4R1M3 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
H2afb2S4R1M3 AC154994.1-201ENSMUST00000217395 302 ntBASIC1.19□□□□□ -2.22
H2afb2S4R1M3 Gm22980-201ENSMUST00000082608 70 ntBASIC1.19□□□□□ -2.22
H2afb2S4R1M3 Gm25142-201ENSMUST00000082698 107 ntBASIC1.19□□□□□ -2.22
H2afb2S4R1M3 Gm25482-201ENSMUST00000083225 107 ntBASIC1.19□□□□□ -2.22
H2afb2S4R1M3 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.19□□□□□ -2.22
H2afb2S4R1M3 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.19□□□□□ -2.22
H2afb2S4R1M3 AC159625.1-201ENSMUST00000220994 2625 ntBASIC1.18□□□□□ -2.22
H2afb2S4R1M3 Snord19-201ENSMUST00000104609 76 ntBASIC1.18□□□□□ -2.22
H2afb2S4R1M3 Gm27476-201ENSMUST00000183366 104 ntBASIC1.18□□□□□ -2.22
H2afb2S4R1M3 Gm28794-201ENSMUST00000185276 136 ntBASIC1.18□□□□□ -2.22
H2afb2S4R1M3 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
H2afb2S4R1M3 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC1.18□□□□□ -2.22
H2afb2S4R1M3 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.18□□□□□ -2.22
H2afb2S4R1M3 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
H2afb2S4R1M3 Mir466p-201ENSMUST00000103925 89 ntBASIC1.17□□□□□ -2.22
H2afb2S4R1M3 Gm25495-201ENSMUST00000104431 131 ntBASIC1.17□□□□□ -2.22
H2afb2S4R1M3 Gm25783-201ENSMUST00000122525 190 ntBASIC1.17□□□□□ -2.22
H2afb2S4R1M3 Gm22586-201ENSMUST00000157507 122 ntBASIC1.17□□□□□ -2.22
H2afb2S4R1M3 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.17□□□□□ -2.22
H2afb2S4R1M3 Mir669k-201ENSMUST00000177742 127 ntBASIC1.17□□□□□ -2.22
H2afb2S4R1M3 Gm25673-201ENSMUST00000179957 127 ntBASIC1.17□□□□□ -2.22
H2afb2S4R1M3 Gm27694-201ENSMUST00000184740 86 ntBASIC1.17□□□□□ -2.22
H2afb2S4R1M3 Gm28409-201ENSMUST00000187064 103 ntBASIC1.17□□□□□ -2.22
H2afb2S4R1M3 Mir7118-201ENSMUST00000197760 61 ntBASIC1.17□□□□□ -2.22
H2afb2S4R1M3 Gm36189-201ENSMUST00000204113 523 ntBASIC1.17□□□□□ -2.22
H2afb2S4R1M3 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.16□□□□□ -2.22
H2afb2S4R1M3 Mir653-201ENSMUST00000102402 85 ntBASIC1.16□□□□□ -2.22
H2afb2S4R1M3 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
H2afb2S4R1M3 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
H2afb2S4R1M3 Gm25423-201ENSMUST00000157609 107 ntBASIC1.16□□□□□ -2.22
H2afb2S4R1M3 Gm25558-201ENSMUST00000158083 106 ntBASIC1.16□□□□□ -2.22
H2afb2S4R1M3 Gm27517-201ENSMUST00000184347 236 ntBASIC1.16□□□□□ -2.22
H2afb2S4R1M3 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.16□□□□□ -2.22
H2afb2S4R1M3 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.16□□□□□ -2.22
H2afb2S4R1M3 Gm46993-201ENSMUST00000220708 259 ntBASIC1.16□□□□□ -2.22
H2afb2S4R1M3 Snord14a-201ENSMUST00000082807 87 ntBASIC1.16□□□□□ -2.22
H2afb2S4R1M3 n-R5s183-201ENSMUST00000083939 115 ntBASIC1.16□□□□□ -2.22
H2afb2S4R1M3 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
H2afb2S4R1M3 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.15□□□□□ -2.22
H2afb2S4R1M3 AC160984.1-201ENSMUST00000225855 3154 ntBASIC1.15□□□□□ -2.22
H2afb2S4R1M3 Gm25938-201ENSMUST00000104139 166 ntBASIC1.15□□□□□ -2.23
H2afb2S4R1M3 Gm23011-201ENSMUST00000104148 132 ntBASIC1.15□□□□□ -2.23
H2afb2S4R1M3 Gm11857-201ENSMUST00000119817 324 ntBASIC1.15□□□□□ -2.23
H2afb2S4R1M3 Gm23901-201ENSMUST00000157570 107 ntBASIC1.15□□□□□ -2.23
H2afb2S4R1M3 Gm22767-201ENSMUST00000158365 165 ntBASIC1.15□□□□□ -2.23
H2afb2S4R1M3 Gm22163-201ENSMUST00000158408 135 ntBASIC1.15□□□□□ -2.23
H2afb2S4R1M3 Gm22944-201ENSMUST00000158662 133 ntBASIC1.15□□□□□ -2.23
H2afb2S4R1M3 Gm25750-201ENSMUST00000175483 112 ntBASIC1.15□□□□□ -2.23
H2afb2S4R1M3 Gm25935-201ENSMUST00000178746 107 ntBASIC1.15□□□□□ -2.23
H2afb2S4R1M3 Gm22621-201ENSMUST00000179678 74 ntBASIC1.15□□□□□ -2.23
H2afb2S4R1M3 Gm27898-201ENSMUST00000183987 80 ntBASIC1.15□□□□□ -2.23
H2afb2S4R1M3 Gm6003-201ENSMUST00000187903 463 ntBASIC1.15□□□□□ -2.23
H2afb2S4R1M3 Mir7116-201ENSMUST00000195956 70 ntBASIC1.15□□□□□ -2.23
H2afb2S4R1M3 AC159885.1-201ENSMUST00000222221 199 ntBASIC1.15□□□□□ -2.23
H2afb2S4R1M3 Mir34a-201ENSMUST00000083559 102 ntBASIC1.15□□□□□ -2.23
H2afb2S4R1M3 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
H2afb2S4R1M3 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
H2afb2S4R1M3 Gm43877-201ENSMUST00000205029 2238 ntBASIC1.14□□□□□ -2.23
H2afb2S4R1M3 Mir544-201ENSMUST00000103813 78 ntBASIC1.14□□□□□ -2.23
H2afb2S4R1M3 Gm24640-201ENSMUST00000116949 126 ntBASIC1.14□□□□□ -2.23
H2afb2S4R1M3 Gm22626-201ENSMUST00000116990 126 ntBASIC1.14□□□□□ -2.23
H2afb2S4R1M3 Gm22051-201ENSMUST00000117002 127 ntBASIC1.14□□□□□ -2.23
H2afb2S4R1M3 Gm16032-201ENSMUST00000118534 168 ntBASIC1.14□□□□□ -2.23
H2afb2S4R1M3 Gm23083-201ENSMUST00000157851 116 ntBASIC1.14□□□□□ -2.23
H2afb2S4R1M3 Gm23545-201ENSMUST00000158205 104 ntBASIC1.14□□□□□ -2.23
H2afb2S4R1M3 Mir3098-201ENSMUST00000175416 87 ntBASIC1.14□□□□□ -2.23
H2afb2S4R1M3 Gm24761-201ENSMUST00000179589 127 ntBASIC1.14□□□□□ -2.23
H2afb2S4R1M3 Gm24488-201ENSMUST00000179934 127 ntBASIC1.14□□□□□ -2.23
H2afb2S4R1M3 Gm25701-201ENSMUST00000179988 127 ntBASIC1.14□□□□□ -2.23
H2afb2S4R1M3 Gm26431-201ENSMUST00000180199 127 ntBASIC1.14□□□□□ -2.23
H2afb2S4R1M3 AC122320.1-201ENSMUST00000227233 105 ntBASIC1.14□□□□□ -2.23
H2afb2S4R1M3 Gm22306-201ENSMUST00000082692 107 ntBASIC1.14□□□□□ -2.23
H2afb2S4R1M3 Mir490-201ENSMUST00000093567 84 ntBASIC1.14□□□□□ -2.23
H2afb2S4R1M3 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.14□□□□□ -2.23
H2afb2S4R1M3 Gm27047-201ENSMUST00000183072 1819 ntBASIC1.13□□□□□ -2.23
H2afb2S4R1M3 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC1.13□□□□□ -2.23
H2afb2S4R1M3 Gm26089-201ENSMUST00000157898 107 ntBASIC1.13□□□□□ -2.23
H2afb2S4R1M3 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.13□□□□□ -2.23
H2afb2S4R1M3 Gm23299-201ENSMUST00000082708 79 ntBASIC1.13□□□□□ -2.23
H2afb2S4R1M3 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.12□□□□□ -2.23
H2afb2S4R1M3 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.12□□□□□ -2.23
H2afb2S4R1M3 Gm25068-201ENSMUST00000103895 110 ntBASIC1.12□□□□□ -2.23
H2afb2S4R1M3 Gm24867-201ENSMUST00000104161 107 ntBASIC1.12□□□□□ -2.23
H2afb2S4R1M3 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.12□□□□□ -2.23
H2afb2S4R1M3 Gm26029-201ENSMUST00000158659 132 ntBASIC1.12□□□□□ -2.23
H2afb2S4R1M3 Gm20391-201ENSMUST00000174722 106 ntBASIC1.12□□□□□ -2.23
H2afb2S4R1M3 Gm25464-201ENSMUST00000175481 107 ntBASIC1.12□□□□□ -2.23
H2afb2S4R1M3 Gm43602-201ENSMUST00000196772 300 ntBASIC1.12□□□□□ -2.23
H2afb2S4R1M3 Gm44921-201ENSMUST00000205290 301 ntBASIC1.12□□□□□ -2.23
H2afb2S4R1M3 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC1.12□□□□□ -2.23
H2afb2S4R1M3 Gm23245-201ENSMUST00000083370 135 ntBASIC1.12□□□□□ -2.23
H2afb2S4R1M3 Gm22744-201ENSMUST00000083444 65 ntBASIC1.12□□□□□ -2.23
H2afb2S4R1M3 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 225.3 ms