Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Mir466h-201ENSMUST00000104748 81 ntBASIC1.3□□□□□ -2.2
H2afb1S4R1E0 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC1.3□□□□□ -2.2
H2afb1S4R1E0 Gm23221-201ENSMUST00000158118 93 ntBASIC1.3□□□□□ -2.2
H2afb1S4R1E0 Gm25834-201ENSMUST00000158916 101 ntBASIC1.3□□□□□ -2.2
H2afb1S4R1E0 Mir466b-4-201ENSMUST00000178801 90 ntBASIC1.3□□□□□ -2.2
H2afb1S4R1E0 Gm25285-201ENSMUST00000178951 90 ntBASIC1.3□□□□□ -2.2
H2afb1S4R1E0 Mir466b-6-201ENSMUST00000180061 90 ntBASIC1.3□□□□□ -2.2
H2afb1S4R1E0 Mir466c-2-201ENSMUST00000180211 90 ntBASIC1.3□□□□□ -2.2
H2afb1S4R1E0 Gm43512-201ENSMUST00000198495 176 ntBASIC1.3□□□□□ -2.2
H2afb1S4R1E0 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.3□□□□□ -2.2
H2afb1S4R1E0 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC1.3□□□□□ -2.2
H2afb1S4R1E0 Gm45654-201ENSMUST00000210980 123 ntBASIC1.3□□□□□ -2.2
H2afb1S4R1E0 n-R5s183-201ENSMUST00000083939 115 ntBASIC1.3□□□□□ -2.2
H2afb1S4R1E0 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.29□□□□□ -2.2
H2afb1S4R1E0 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
H2afb1S4R1E0 Gm23558-201ENSMUST00000157823 80 ntBASIC1.29□□□□□ -2.2
H2afb1S4R1E0 Gm25558-201ENSMUST00000158083 106 ntBASIC1.29□□□□□ -2.2
H2afb1S4R1E0 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.29□□□□□ -2.2
H2afb1S4R1E0 Mir6406-201ENSMUST00000183592 120 ntBASIC1.29□□□□□ -2.2
H2afb1S4R1E0 Gm24457-201ENSMUST00000083196 105 ntBASIC1.29□□□□□ -2.2
H2afb1S4R1E0 Gm25410-201ENSMUST00000083758 137 ntBASIC1.29□□□□□ -2.2
H2afb1S4R1E0 Gm43877-201ENSMUST00000205029 2238 ntBASIC1.28□□□□□ -2.2
H2afb1S4R1E0 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
H2afb1S4R1E0 Gm25494-201ENSMUST00000158143 100 ntBASIC1.28□□□□□ -2.2
H2afb1S4R1E0 Gm22163-201ENSMUST00000158408 135 ntBASIC1.28□□□□□ -2.2
H2afb1S4R1E0 Gm22944-201ENSMUST00000158662 133 ntBASIC1.28□□□□□ -2.2
H2afb1S4R1E0 Gm25464-201ENSMUST00000175481 107 ntBASIC1.28□□□□□ -2.2
H2afb1S4R1E0 Mir34a-201ENSMUST00000083559 102 ntBASIC1.28□□□□□ -2.2
H2afb1S4R1E0 Mir320-201ENSMUST00000083594 82 ntBASIC1.28□□□□□ -2.2
H2afb1S4R1E0 Gm16032-201ENSMUST00000118534 168 ntBASIC1.27□□□□□ -2.21
H2afb1S4R1E0 Gm11857-201ENSMUST00000119817 324 ntBASIC1.27□□□□□ -2.21
H2afb1S4R1E0 Gm12771-201ENSMUST00000120246 135 ntBASIC1.27□□□□□ -2.21
H2afb1S4R1E0 Gm23170-201ENSMUST00000157158 106 ntBASIC1.27□□□□□ -2.21
H2afb1S4R1E0 Gm24394-201ENSMUST00000158141 123 ntBASIC1.27□□□□□ -2.21
H2afb1S4R1E0 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
H2afb1S4R1E0 Gm44853-201ENSMUST00000209070 250 ntBASIC1.27□□□□□ -2.21
H2afb1S4R1E0 AC133517.1-203ENSMUST00000225570 390 ntBASIC1.27□□□□□ -2.21
H2afb1S4R1E0 Gm22306-201ENSMUST00000082692 107 ntBASIC1.27□□□□□ -2.21
H2afb1S4R1E0 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.27□□□□□ -2.21
H2afb1S4R1E0 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
H2afb1S4R1E0 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
H2afb1S4R1E0 Gm24015-201ENSMUST00000157725 232 ntBASIC1.26□□□□□ -2.21
H2afb1S4R1E0 Gm25750-201ENSMUST00000175483 112 ntBASIC1.26□□□□□ -2.21
H2afb1S4R1E0 Gm44921-201ENSMUST00000205290 301 ntBASIC1.26□□□□□ -2.21
H2afb1S4R1E0 Gm23245-201ENSMUST00000083370 135 ntBASIC1.26□□□□□ -2.21
H2afb1S4R1E0 Gm25068-201ENSMUST00000103895 110 ntBASIC1.25□□□□□ -2.21
H2afb1S4R1E0 Gm23048-201ENSMUST00000157237 129 ntBASIC1.25□□□□□ -2.21
H2afb1S4R1E0 Gm27517-201ENSMUST00000184347 236 ntBASIC1.25□□□□□ -2.21
H2afb1S4R1E0 Gm28409-201ENSMUST00000187064 103 ntBASIC1.25□□□□□ -2.21
H2afb1S4R1E0 Gm43602-201ENSMUST00000196772 300 ntBASIC1.25□□□□□ -2.21
H2afb1S4R1E0 Gm25820-202ENSMUST00000197479 128 ntBASIC1.25□□□□□ -2.21
H2afb1S4R1E0 Gm44057-201ENSMUST00000204547 96 ntBASIC1.25□□□□□ -2.21
H2afb1S4R1E0 Snord14a-201ENSMUST00000082807 87 ntBASIC1.25□□□□□ -2.21
H2afb1S4R1E0 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.25□□□□□ -2.21
H2afb1S4R1E0 Mir490-201ENSMUST00000093567 84 ntBASIC1.25□□□□□ -2.21
H2afb1S4R1E0 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
H2afb1S4R1E0 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
H2afb1S4R1E0 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.24□□□□□ -2.21
H2afb1S4R1E0 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.24□□□□□ -2.21
H2afb1S4R1E0 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
H2afb1S4R1E0 Gm12309-201ENSMUST00000119889 182 ntBASIC1.24□□□□□ -2.21
H2afb1S4R1E0 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.24□□□□□ -2.21
H2afb1S4R1E0 Gm25423-201ENSMUST00000157609 107 ntBASIC1.24□□□□□ -2.21
H2afb1S4R1E0 Gm24177-201ENSMUST00000158927 131 ntBASIC1.24□□□□□ -2.21
H2afb1S4R1E0 Gm25958-201ENSMUST00000175114 71 ntBASIC1.24□□□□□ -2.21
H2afb1S4R1E0 Gm23864-201ENSMUST00000177607 107 ntBASIC1.24□□□□□ -2.21
H2afb1S4R1E0 Gm43199-201ENSMUST00000200019 307 ntBASIC1.24□□□□□ -2.21
H2afb1S4R1E0 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC1.24□□□□□ -2.21
H2afb1S4R1E0 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC1.24□□□□□ -2.21
H2afb1S4R1E0 Gm25895-201ENSMUST00000083714 100 ntBASIC1.24□□□□□ -2.21
H2afb1S4R1E0 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.23□□□□□ -2.21
H2afb1S4R1E0 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
H2afb1S4R1E0 Mir544-201ENSMUST00000103813 78 ntBASIC1.23□□□□□ -2.21
H2afb1S4R1E0 Gm24132-201ENSMUST00000104745 91 ntBASIC1.23□□□□□ -2.21
H2afb1S4R1E0 Gm12449-201ENSMUST00000117572 234 ntBASIC1.23□□□□□ -2.21
H2afb1S4R1E0 Gm22099-201ENSMUST00000157925 123 ntBASIC1.23□□□□□ -2.21
H2afb1S4R1E0 Gm22663-201ENSMUST00000158721 102 ntBASIC1.23□□□□□ -2.21
H2afb1S4R1E0 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.23□□□□□ -2.21
H2afb1S4R1E0 Gm28669-201ENSMUST00000188400 100 ntBASIC1.23□□□□□ -2.21
H2afb1S4R1E0 Gm37579-201ENSMUST00000194291 142 ntBASIC1.23□□□□□ -2.21
H2afb1S4R1E0 Gm9251-201ENSMUST00000197202 628 ntBASIC1.23□□□□□ -2.21
H2afb1S4R1E0 Gm26225-201ENSMUST00000082508 135 ntBASIC1.23□□□□□ -2.21
H2afb1S4R1E0 Gm25855-201ENSMUST00000082787 72 ntBASIC1.23□□□□□ -2.21
H2afb1S4R1E0 Gm22686-201ENSMUST00000082847 100 ntBASIC1.23□□□□□ -2.21
H2afb1S4R1E0 Gm23461-201ENSMUST00000083265 107 ntBASIC1.23□□□□□ -2.21
H2afb1S4R1E0 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.22□□□□□ -2.21
H2afb1S4R1E0 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
H2afb1S4R1E0 Gm25538-201ENSMUST00000101943 107 ntBASIC1.22□□□□□ -2.21
H2afb1S4R1E0 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.22□□□□□ -2.21
H2afb1S4R1E0 Gm25828-201ENSMUST00000157087 95 ntBASIC1.22□□□□□ -2.21
H2afb1S4R1E0 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
H2afb1S4R1E0 Gm20391-201ENSMUST00000174722 106 ntBASIC1.22□□□□□ -2.21
H2afb1S4R1E0 Gm27493-201ENSMUST00000184128 78 ntBASIC1.22□□□□□ -2.21
H2afb1S4R1E0 Mir7017-201ENSMUST00000184894 62 ntBASIC1.22□□□□□ -2.21
H2afb1S4R1E0 Gm37624-201ENSMUST00000193751 219 ntBASIC1.22□□□□□ -2.21
H2afb1S4R1E0 AC129085.1-201ENSMUST00000225263 165 ntBASIC1.22□□□□□ -2.21
H2afb1S4R1E0 Gm23299-201ENSMUST00000082708 79 ntBASIC1.22□□□□□ -2.21
H2afb1S4R1E0 Gm22169-201ENSMUST00000083229 107 ntBASIC1.22□□□□□ -2.21
H2afb1S4R1E0 Gm24929-201ENSMUST00000083403 139 ntBASIC1.22□□□□□ -2.21
H2afb1S4R1E0 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 193.7 ms