Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm20391-201ENSMUST00000174722 106 ntBASIC0.97□□□□□ -2.25
Trim3Q9R1R2 Mir6380-201ENSMUST00000184334 81 ntBASIC0.97□□□□□ -2.25
Trim3Q9R1R2 Mir3970-201ENSMUST00000199287 90 ntBASIC0.97□□□□□ -2.25
Trim3Q9R1R2 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC0.97□□□□□ -2.25
Trim3Q9R1R2 AC125374.2-201ENSMUST00000214278 162 ntBASIC0.97□□□□□ -2.25
Trim3Q9R1R2 CT009696.1-201ENSMUST00000215745 256 ntBASIC0.97□□□□□ -2.25
Trim3Q9R1R2 CT010449.1-201ENSMUST00000220624 153 ntBASIC0.97□□□□□ -2.25
Trim3Q9R1R2 Gm22743-201ENSMUST00000083445 133 ntBASIC0.97□□□□□ -2.25
Trim3Q9R1R2 Mir196b-201ENSMUST00000083509 85 ntBASIC0.97□□□□□ -2.25
Trim3Q9R1R2 Mir22-201ENSMUST00000083595 95 ntBASIC0.97□□□□□ -2.25
Trim3Q9R1R2 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
Trim3Q9R1R2 Gm23328-201ENSMUST00000157418 132 ntBASIC0.96□□□□□ -2.26
Trim3Q9R1R2 Gm25024-201ENSMUST00000179667 104 ntBASIC0.96□□□□□ -2.26
Trim3Q9R1R2 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
Trim3Q9R1R2 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC0.96□□□□□ -2.26
Trim3Q9R1R2 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
Trim3Q9R1R2 Mir410-201ENSMUST00000083563 81 ntBASIC0.96□□□□□ -2.26
Trim3Q9R1R2 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC0.95□□□□□ -2.26
Trim3Q9R1R2 Gm20118-201ENSMUST00000187207 162 ntBASIC0.95□□□□□ -2.26
Trim3Q9R1R2 Gm25128-201ENSMUST00000083339 76 ntBASIC0.95□□□□□ -2.26
Trim3Q9R1R2 Gm25683-201ENSMUST00000083940 131 ntBASIC0.95□□□□□ -2.26
Trim3Q9R1R2 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.94□□□□□ -2.26
Trim3Q9R1R2 Gm24808-201ENSMUST00000157993 118 ntBASIC0.94□□□□□ -2.26
Trim3Q9R1R2 Gm24392-201ENSMUST00000158136 103 ntBASIC0.94□□□□□ -2.26
Trim3Q9R1R2 Gm23581-201ENSMUST00000158531 63 ntBASIC0.94□□□□□ -2.26
Trim3Q9R1R2 Gm24667-201ENSMUST00000158938 103 ntBASIC0.94□□□□□ -2.26
Trim3Q9R1R2 Mir7052-201ENSMUST00000184821 65 ntBASIC0.94□□□□□ -2.26
Trim3Q9R1R2 Gm28344-201ENSMUST00000185704 279 ntBASIC0.94□□□□□ -2.26
Trim3Q9R1R2 CT033781.2-201ENSMUST00000221113 153 ntBASIC0.94□□□□□ -2.26
Trim3Q9R1R2 Gm23451-201ENSMUST00000083328 122 ntBASIC0.94□□□□□ -2.26
Trim3Q9R1R2 n-R5s183-201ENSMUST00000083939 115 ntBASIC0.94□□□□□ -2.26
Trim3Q9R1R2 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
Trim3Q9R1R2 Gm43877-201ENSMUST00000205029 2238 ntBASIC0.94□□□□□ -2.26
Trim3Q9R1R2 Gm24423-201ENSMUST00000101982 106 ntBASIC0.93□□□□□ -2.26
Trim3Q9R1R2 Gm11322-201ENSMUST00000118095 435 ntBASIC0.93□□□□□ -2.26
Trim3Q9R1R2 Gm12837-201ENSMUST00000120131 373 ntBASIC0.93□□□□□ -2.26
Trim3Q9R1R2 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC0.93□□□□□ -2.26
Trim3Q9R1R2 Gm26482-201ENSMUST00000158015 62 ntBASIC0.93□□□□□ -2.26
Trim3Q9R1R2 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.93□□□□□ -2.26
Trim3Q9R1R2 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
Trim3Q9R1R2 Gm44563-201ENSMUST00000207958 178 ntBASIC0.93□□□□□ -2.26
Trim3Q9R1R2 Gm25855-201ENSMUST00000082787 72 ntBASIC0.93□□□□□ -2.26
Trim3Q9R1R2 Gm24431-201ENSMUST00000104073 66 ntBASIC0.92□□□□□ -2.26
Trim3Q9R1R2 Gm25111-201ENSMUST00000116686 147 ntBASIC0.92□□□□□ -2.26
Trim3Q9R1R2 Gm13711-201ENSMUST00000119708 453 ntBASIC0.92□□□□□ -2.26
Trim3Q9R1R2 Gm23996-201ENSMUST00000158062 131 ntBASIC0.92□□□□□ -2.26
Trim3Q9R1R2 Gm23114-201ENSMUST00000158478 117 ntBASIC0.92□□□□□ -2.26
Trim3Q9R1R2 Gm26402-201ENSMUST00000158499 113 ntBASIC0.92□□□□□ -2.26
Trim3Q9R1R2 Gm25715-201ENSMUST00000158627 125 ntBASIC0.92□□□□□ -2.26
Trim3Q9R1R2 Gm22888-201ENSMUST00000158640 77 ntBASIC0.92□□□□□ -2.26
Trim3Q9R1R2 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.92□□□□□ -2.26
Trim3Q9R1R2 Gm25235-201ENSMUST00000179933 107 ntBASIC0.92□□□□□ -2.26
Trim3Q9R1R2 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
Trim3Q9R1R2 Mir6905-201ENSMUST00000184228 70 ntBASIC0.92□□□□□ -2.26
Trim3Q9R1R2 Gm38183-201ENSMUST00000193189 205 ntBASIC0.92□□□□□ -2.26
Trim3Q9R1R2 Gm38274-201ENSMUST00000195689 148 ntBASIC0.92□□□□□ -2.26
Trim3Q9R1R2 Gm44396-201ENSMUST00000199843 114 ntBASIC0.92□□□□□ -2.26
Trim3Q9R1R2 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC0.92□□□□□ -2.26
Trim3Q9R1R2 Gm24624-201ENSMUST00000082617 164 ntBASIC0.92□□□□□ -2.26
Trim3Q9R1R2 Gm13801-201ENSMUST00000120750 160 ntBASIC0.91□□□□□ -2.26
Trim3Q9R1R2 Gm24909-201ENSMUST00000157290 280 ntBASIC0.91□□□□□ -2.26
Trim3Q9R1R2 Gm22553-201ENSMUST00000157797 295 ntBASIC0.91□□□□□ -2.26
Trim3Q9R1R2 Gm25558-201ENSMUST00000158083 106 ntBASIC0.91□□□□□ -2.26
Trim3Q9R1R2 Gm28862-201ENSMUST00000188246 163 ntBASIC0.91□□□□□ -2.26
Trim3Q9R1R2 Gm44052-201ENSMUST00000203382 396 ntBASIC0.91□□□□□ -2.26
Trim3Q9R1R2 Gm26301-201ENSMUST00000104813 95 ntBASIC0.9□□□□□ -2.27
Trim3Q9R1R2 Gm12432-201ENSMUST00000119540 186 ntBASIC0.9□□□□□ -2.27
Trim3Q9R1R2 Gm14792-201ENSMUST00000119725 258 ntBASIC0.9□□□□□ -2.27
Trim3Q9R1R2 Gm25424-201ENSMUST00000157612 58 ntBASIC0.9□□□□□ -2.27
Trim3Q9R1R2 Gm23893-201ENSMUST00000158106 134 ntBASIC0.9□□□□□ -2.27
Trim3Q9R1R2 Mir1931-201ENSMUST00000158589 119 ntBASIC0.9□□□□□ -2.27
Trim3Q9R1R2 Mir1954-201ENSMUST00000175595 86 ntBASIC0.9□□□□□ -2.27
Trim3Q9R1R2 Gm27420-201ENSMUST00000183823 79 ntBASIC0.9□□□□□ -2.27
Trim3Q9R1R2 Gm27905-201ENSMUST00000184005 207 ntBASIC0.9□□□□□ -2.27
Trim3Q9R1R2 Gm27545-201ENSMUST00000184755 202 ntBASIC0.9□□□□□ -2.27
Trim3Q9R1R2 Gm44977-201ENSMUST00000205283 420 ntBASIC0.9□□□□□ -2.27
Trim3Q9R1R2 Gm24460-201ENSMUST00000082731 106 ntBASIC0.9□□□□□ -2.27
Trim3Q9R1R2 Snord35a-201ENSMUST00000083884 90 ntBASIC0.9□□□□□ -2.27
Trim3Q9R1R2 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
Trim3Q9R1R2 Mir880-201ENSMUST00000104809 78 ntBASIC0.89□□□□□ -2.27
Trim3Q9R1R2 Gm11388-201ENSMUST00000120908 159 ntBASIC0.89□□□□□ -2.27
Trim3Q9R1R2 n-R5s73-201ENSMUST00000122508 107 ntBASIC0.89□□□□□ -2.27
Trim3Q9R1R2 Gm24634-201ENSMUST00000158672 107 ntBASIC0.89□□□□□ -2.27
Trim3Q9R1R2 Mir6336-201ENSMUST00000183581 130 ntBASIC0.89□□□□□ -2.27
Trim3Q9R1R2 Mir7663-201ENSMUST00000183950 61 ntBASIC0.89□□□□□ -2.27
Trim3Q9R1R2 Gm43898-201ENSMUST00000204456 424 ntBASIC0.89□□□□□ -2.27
Trim3Q9R1R2 Gm45508-201ENSMUST00000209298 299 ntBASIC0.89□□□□□ -2.27
Trim3Q9R1R2 Gm18188-201ENSMUST00000219386 478 ntBASIC0.89□□□□□ -2.27
Trim3Q9R1R2 Gm25851-201ENSMUST00000082794 107 ntBASIC0.89□□□□□ -2.27
Trim3Q9R1R2 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
Trim3Q9R1R2 Gm25011-201ENSMUST00000158398 126 ntBASIC0.88□□□□□ -2.27
Trim3Q9R1R2 Mir6350-201ENSMUST00000183639 105 ntBASIC0.88□□□□□ -2.27
Trim3Q9R1R2 Gm44326-201ENSMUST00000198226 101 ntBASIC0.88□□□□□ -2.27
Trim3Q9R1R2 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.88□□□□□ -2.27
Trim3Q9R1R2 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
Trim3Q9R1R2 Mir669o-201ENSMUST00000103898 96 ntBASIC0.87□□□□□ -2.27
Trim3Q9R1R2 Gm22544-201ENSMUST00000104349 127 ntBASIC0.87□□□□□ -2.27
Trim3Q9R1R2 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC0.87□□□□□ -2.27
Trim3Q9R1R2 Gm24006-201ENSMUST00000158462 132 ntBASIC0.87□□□□□ -2.27
Trim3Q9R1R2 Gm22425-201ENSMUST00000158532 138 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 160.6 ms