Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Gm25627-201ENSMUST00000084003 153 ntBASIC1.55□□□□□ -2.16
Rnf4Q9QZS2 AC160984.1-201ENSMUST00000225855 3154 ntBASIC1.55□□□□□ -2.16
Rnf4Q9QZS2 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Rnf4Q9QZS2 Mir467g-201ENSMUST00000116906 120 ntBASIC1.54□□□□□ -2.16
Rnf4Q9QZS2 Gm14536-201ENSMUST00000118324 138 ntBASIC1.54□□□□□ -2.16
Rnf4Q9QZS2 Gm15027-201ENSMUST00000120922 138 ntBASIC1.54□□□□□ -2.16
Rnf4Q9QZS2 Gm23170-201ENSMUST00000157158 106 ntBASIC1.54□□□□□ -2.16
Rnf4Q9QZS2 Gm25423-201ENSMUST00000157609 107 ntBASIC1.54□□□□□ -2.16
Rnf4Q9QZS2 Gm23221-201ENSMUST00000158118 93 ntBASIC1.54□□□□□ -2.16
Rnf4Q9QZS2 Gm22767-201ENSMUST00000158365 165 ntBASIC1.54□□□□□ -2.16
Rnf4Q9QZS2 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Rnf4Q9QZS2 Gm44325-201ENSMUST00000196757 77 ntBASIC1.54□□□□□ -2.16
Rnf4Q9QZS2 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.54□□□□□ -2.16
Rnf4Q9QZS2 Snord14a-201ENSMUST00000082807 87 ntBASIC1.54□□□□□ -2.16
Rnf4Q9QZS2 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Rnf4Q9QZS2 Gm25274-201ENSMUST00000104296 135 ntBASIC1.53□□□□□ -2.16
Rnf4Q9QZS2 Snord89-201ENSMUST00000104516 110 ntBASIC1.53□□□□□ -2.16
Rnf4Q9QZS2 Snord19-201ENSMUST00000104609 76 ntBASIC1.53□□□□□ -2.16
Rnf4Q9QZS2 Gm12449-201ENSMUST00000117572 234 ntBASIC1.53□□□□□ -2.16
Rnf4Q9QZS2 Gm15115-201ENSMUST00000121145 264 ntBASIC1.53□□□□□ -2.16
Rnf4Q9QZS2 Gm22228-201ENSMUST00000157364 101 ntBASIC1.53□□□□□ -2.16
Rnf4Q9QZS2 Gm25015-201ENSMUST00000158400 128 ntBASIC1.53□□□□□ -2.16
Rnf4Q9QZS2 Gm27476-201ENSMUST00000183366 104 ntBASIC1.53□□□□□ -2.16
Rnf4Q9QZS2 Gm27585-201ENSMUST00000183717 199 ntBASIC1.53□□□□□ -2.16
Rnf4Q9QZS2 Gm28794-201ENSMUST00000185276 136 ntBASIC1.53□□□□□ -2.16
Rnf4Q9QZS2 Gm36189-201ENSMUST00000204113 523 ntBASIC1.53□□□□□ -2.16
Rnf4Q9QZS2 Gm44057-201ENSMUST00000204547 96 ntBASIC1.53□□□□□ -2.16
Rnf4Q9QZS2 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC1.53□□□□□ -2.16
Rnf4Q9QZS2 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.53□□□□□ -2.16
Rnf4Q9QZS2 Gm25654-201ENSMUST00000158467 88 ntBASIC1.52□□□□□ -2.17
Rnf4Q9QZS2 Gm25044-201ENSMUST00000158603 104 ntBASIC1.52□□□□□ -2.17
Rnf4Q9QZS2 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC1.52□□□□□ -2.17
Rnf4Q9QZS2 Mir34a-201ENSMUST00000083559 102 ntBASIC1.52□□□□□ -2.17
Rnf4Q9QZS2 Mir146-201ENSMUST00000083667 65 ntBASIC1.52□□□□□ -2.17
Rnf4Q9QZS2 Gm23347-201ENSMUST00000083823 82 ntBASIC1.52□□□□□ -2.17
Rnf4Q9QZS2 Gm25170-201ENSMUST00000104191 129 ntBASIC1.51□□□□□ -2.17
Rnf4Q9QZS2 Gm24375-201ENSMUST00000104397 132 ntBASIC1.51□□□□□ -2.17
Rnf4Q9QZS2 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.51□□□□□ -2.17
Rnf4Q9QZS2 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.51□□□□□ -2.17
Rnf4Q9QZS2 Gm25783-201ENSMUST00000122525 190 ntBASIC1.51□□□□□ -2.17
Rnf4Q9QZS2 Gm24262-201ENSMUST00000157431 144 ntBASIC1.51□□□□□ -2.17
Rnf4Q9QZS2 Gm22586-201ENSMUST00000157507 122 ntBASIC1.51□□□□□ -2.17
Rnf4Q9QZS2 Gm22082-201ENSMUST00000157587 161 ntBASIC1.51□□□□□ -2.17
Rnf4Q9QZS2 Gm23113-201ENSMUST00000158477 99 ntBASIC1.51□□□□□ -2.17
Rnf4Q9QZS2 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.51□□□□□ -2.17
Rnf4Q9QZS2 Mir6240-201ENSMUST00000184281 117 ntBASIC1.51□□□□□ -2.17
Rnf4Q9QZS2 Mir7665-201ENSMUST00000184907 63 ntBASIC1.51□□□□□ -2.17
Rnf4Q9QZS2 Gm43199-201ENSMUST00000200019 307 ntBASIC1.51□□□□□ -2.17
Rnf4Q9QZS2 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Rnf4Q9QZS2 Gm25697-201ENSMUST00000082902 98 ntBASIC1.51□□□□□ -2.17
Rnf4Q9QZS2 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.51□□□□□ -2.17
Rnf4Q9QZS2 Gm22761-201ENSMUST00000102278 96 ntBASIC1.5□□□□□ -2.17
Rnf4Q9QZS2 Gm24640-201ENSMUST00000116949 126 ntBASIC1.5□□□□□ -2.17
Rnf4Q9QZS2 Gm22626-201ENSMUST00000116990 126 ntBASIC1.5□□□□□ -2.17
Rnf4Q9QZS2 n-R5s87-201ENSMUST00000122752 116 ntBASIC1.5□□□□□ -2.17
Rnf4Q9QZS2 Gm23901-201ENSMUST00000157570 107 ntBASIC1.5□□□□□ -2.17
Rnf4Q9QZS2 Gm23898-201ENSMUST00000158111 103 ntBASIC1.5□□□□□ -2.17
Rnf4Q9QZS2 Gm24902-201ENSMUST00000158126 123 ntBASIC1.5□□□□□ -2.17
Rnf4Q9QZS2 Gm25267-201ENSMUST00000158522 63 ntBASIC1.5□□□□□ -2.17
Rnf4Q9QZS2 Gm24229-201ENSMUST00000158830 118 ntBASIC1.5□□□□□ -2.17
Rnf4Q9QZS2 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC1.5□□□□□ -2.17
Rnf4Q9QZS2 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Rnf4Q9QZS2 Gm24761-201ENSMUST00000179589 127 ntBASIC1.5□□□□□ -2.17
Rnf4Q9QZS2 Gm24488-201ENSMUST00000179934 127 ntBASIC1.5□□□□□ -2.17
Rnf4Q9QZS2 Gm25701-201ENSMUST00000179988 127 ntBASIC1.5□□□□□ -2.17
Rnf4Q9QZS2 Gm26431-201ENSMUST00000180199 127 ntBASIC1.5□□□□□ -2.17
Rnf4Q9QZS2 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Rnf4Q9QZS2 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Rnf4Q9QZS2 Gm12432-201ENSMUST00000119540 186 ntBASIC1.49□□□□□ -2.17
Rnf4Q9QZS2 Gm23655-201ENSMUST00000122627 105 ntBASIC1.49□□□□□ -2.17
Rnf4Q9QZS2 Gm22665-201ENSMUST00000158720 275 ntBASIC1.49□□□□□ -2.17
Rnf4Q9QZS2 Gm28409-201ENSMUST00000187064 103 ntBASIC1.49□□□□□ -2.17
Rnf4Q9QZS2 Gm43602-201ENSMUST00000196772 300 ntBASIC1.49□□□□□ -2.17
Rnf4Q9QZS2 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
Rnf4Q9QZS2 Gm14882-201ENSMUST00000117216 218 ntBASIC1.48□□□□□ -2.17
Rnf4Q9QZS2 Gm14838-201ENSMUST00000118913 248 ntBASIC1.48□□□□□ -2.17
Rnf4Q9QZS2 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.48□□□□□ -2.17
Rnf4Q9QZS2 Gm23584-201ENSMUST00000157655 129 ntBASIC1.48□□□□□ -2.17
Rnf4Q9QZS2 Mir1931-201ENSMUST00000158589 119 ntBASIC1.48□□□□□ -2.17
Rnf4Q9QZS2 Gm27894-201ENSMUST00000184177 92 ntBASIC1.48□□□□□ -2.17
Rnf4Q9QZS2 Gm25482-201ENSMUST00000083225 107 ntBASIC1.48□□□□□ -2.17
Rnf4Q9QZS2 n-R5s183-201ENSMUST00000083939 115 ntBASIC1.48□□□□□ -2.17
Rnf4Q9QZS2 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.47□□□□□ -2.17
Rnf4Q9QZS2 Gm25316-201ENSMUST00000116826 118 ntBASIC1.47□□□□□ -2.17
Rnf4Q9QZS2 Gm25976-201ENSMUST00000158695 130 ntBASIC1.47□□□□□ -2.17
Rnf4Q9QZS2 Gm25831-201ENSMUST00000158924 163 ntBASIC1.47□□□□□ -2.17
Rnf4Q9QZS2 Gm28344-201ENSMUST00000185704 279 ntBASIC1.47□□□□□ -2.17
Rnf4Q9QZS2 Gm21064-202ENSMUST00000190583 278 ntBASIC1.47□□□□□ -2.17
Rnf4Q9QZS2 Gm45508-201ENSMUST00000209298 299 ntBASIC1.47□□□□□ -2.17
Rnf4Q9QZS2 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC1.47□□□□□ -2.17
Rnf4Q9QZS2 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.47□□□□□ -2.17
Rnf4Q9QZS2 Snord82-201ENSMUST00000082889 70 ntBASIC1.47□□□□□ -2.17
Rnf4Q9QZS2 Gm12080-201ENSMUST00000119821 1883 ntBASIC1.46□□□□□ -2.18
Rnf4Q9QZS2 Gm22545-201ENSMUST00000104350 132 ntBASIC1.46□□□□□ -2.18
Rnf4Q9QZS2 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC1.46□□□□□ -2.18
Rnf4Q9QZS2 Gm12771-201ENSMUST00000120246 135 ntBASIC1.46□□□□□ -2.18
Rnf4Q9QZS2 Gm26279-201ENSMUST00000157095 102 ntBASIC1.46□□□□□ -2.18
Rnf4Q9QZS2 Gm25390-201ENSMUST00000157341 103 ntBASIC1.46□□□□□ -2.18
Rnf4Q9QZS2 Gm25223-201ENSMUST00000158200 110 ntBASIC1.46□□□□□ -2.18
Rnf4Q9QZS2 Gm29603-201ENSMUST00000186792 334 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 148.6 ms