Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm24498-201ENSMUST00000158445 102 ntBASIC0.28□□□□□ -2.36
Trem1Q9JKE2 Gm24547-201ENSMUST00000158649 149 ntBASIC0.28□□□□□ -2.36
Trem1Q9JKE2 Mir1954-201ENSMUST00000175595 86 ntBASIC0.28□□□□□ -2.36
Trem1Q9JKE2 Gm22801-201ENSMUST00000175624 84 ntBASIC0.28□□□□□ -2.36
Trem1Q9JKE2 Gm27894-201ENSMUST00000184177 92 ntBASIC0.28□□□□□ -2.36
Trem1Q9JKE2 AC132437.1-201ENSMUST00000218308 320 ntBASIC0.28□□□□□ -2.36
Trem1Q9JKE2 Gm24920-201ENSMUST00000083018 85 ntBASIC0.28□□□□□ -2.36
Trem1Q9JKE2 Gm24258-201ENSMUST00000083739 133 ntBASIC0.28□□□□□ -2.36
Trem1Q9JKE2 Mir451a-201ENSMUST00000093557 72 ntBASIC0.28□□□□□ -2.36
Trem1Q9JKE2 Gm10730-201ENSMUST00000194097 2723 ntBASIC0.27□□□□□ -2.37
Trem1Q9JKE2 Gm22759-201ENSMUST00000102276 96 ntBASIC0.27□□□□□ -2.37
Trem1Q9JKE2 Gm14307-201ENSMUST00000118930 291 ntBASIC0.27□□□□□ -2.37
Trem1Q9JKE2 Gm14297-201ENSMUST00000129110 291 ntBASIC0.27□□□□□ -2.37
Trem1Q9JKE2 Gm16362-201ENSMUST00000135189 214 ntBASIC0.27□□□□□ -2.37
Trem1Q9JKE2 Gm23779-201ENSMUST00000157938 64 ntBASIC0.27□□□□□ -2.37
Trem1Q9JKE2 Gm24192-201ENSMUST00000157978 145 ntBASIC0.27□□□□□ -2.37
Trem1Q9JKE2 Gm23714-201ENSMUST00000179259 105 ntBASIC0.27□□□□□ -2.37
Trem1Q9JKE2 Gm26073-201ENSMUST00000179906 127 ntBASIC0.27□□□□□ -2.37
Trem1Q9JKE2 Mir6350-201ENSMUST00000183639 105 ntBASIC0.27□□□□□ -2.37
Trem1Q9JKE2 Gm25937-201ENSMUST00000083912 107 ntBASIC0.27□□□□□ -2.37
Trem1Q9JKE2 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
Trem1Q9JKE2 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
Trem1Q9JKE2 Gm25773-201ENSMUST00000116718 127 ntBASIC0.26□□□□□ -2.37
Trem1Q9JKE2 Gm6272-201ENSMUST00000121256 171 ntBASIC0.26□□□□□ -2.37
Trem1Q9JKE2 Gm24629-201ENSMUST00000122762 89 ntBASIC0.26□□□□□ -2.37
Trem1Q9JKE2 Mir7093-201ENSMUST00000184195 101 ntBASIC0.26□□□□□ -2.37
Trem1Q9JKE2 Gm28927-201ENSMUST00000191528 272 ntBASIC0.26□□□□□ -2.37
Trem1Q9JKE2 Gm44211-201ENSMUST00000204867 145 ntBASIC0.26□□□□□ -2.37
Trem1Q9JKE2 Gm29818-201ENSMUST00000218070 165 ntBASIC0.26□□□□□ -2.37
Trem1Q9JKE2 AC115735.2-201ENSMUST00000227135 351 ntBASIC0.26□□□□□ -2.37
Trem1Q9JKE2 Gm23377-201ENSMUST00000082943 126 ntBASIC0.26□□□□□ -2.37
Trem1Q9JKE2 Gm24043-201ENSMUST00000083108 116 ntBASIC0.26□□□□□ -2.37
Trem1Q9JKE2 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
Trem1Q9JKE2 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC0.25□□□□□ -2.37
Trem1Q9JKE2 Gm25300-201ENSMUST00000175284 84 ntBASIC0.25□□□□□ -2.37
Trem1Q9JKE2 Gm27317-201ENSMUST00000183533 95 ntBASIC0.25□□□□□ -2.37
Trem1Q9JKE2 Gm45471-201ENSMUST00000211270 281 ntBASIC0.25□□□□□ -2.37
Trem1Q9JKE2 Gm22421-201ENSMUST00000083058 107 ntBASIC0.25□□□□□ -2.37
Trem1Q9JKE2 Gm26495-201ENSMUST00000083152 137 ntBASIC0.25□□□□□ -2.37
Trem1Q9JKE2 Gm26090-201ENSMUST00000157897 128 ntBASIC0.24□□□□□ -2.37
Trem1Q9JKE2 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC0.24□□□□□ -2.37
Trem1Q9JKE2 Mir8090-201ENSMUST00000185078 136 ntBASIC0.24□□□□□ -2.37
Trem1Q9JKE2 AC164297.5-201ENSMUST00000224365 198 ntBASIC0.24□□□□□ -2.37
Trem1Q9JKE2 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.24□□□□□ -2.37
Trem1Q9JKE2 Rny3-201ENSMUST00000083011 102 ntBASIC0.24□□□□□ -2.37
Trem1Q9JKE2 Gm26474-201ENSMUST00000116762 122 ntBASIC0.23□□□□□ -2.37
Trem1Q9JKE2 Gm22814-201ENSMUST00000157452 104 ntBASIC0.23□□□□□ -2.37
Trem1Q9JKE2 Gm22085-201ENSMUST00000158344 110 ntBASIC0.23□□□□□ -2.37
Trem1Q9JKE2 Gm22011-201ENSMUST00000158790 123 ntBASIC0.23□□□□□ -2.37
Trem1Q9JKE2 Gm23416-201ENSMUST00000175520 95 ntBASIC0.23□□□□□ -2.37
Trem1Q9JKE2 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC0.23□□□□□ -2.37
Trem1Q9JKE2 Gm23571-201ENSMUST00000180073 127 ntBASIC0.23□□□□□ -2.37
Trem1Q9JKE2 Gm27656-201ENSMUST00000185055 80 ntBASIC0.23□□□□□ -2.37
Trem1Q9JKE2 Gm43976-201ENSMUST00000203637 235 ntBASIC0.23□□□□□ -2.37
Trem1Q9JKE2 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC0.23□□□□□ -2.37
Trem1Q9JKE2 Gm44687-201ENSMUST00000204975 235 ntBASIC0.23□□□□□ -2.37
Trem1Q9JKE2 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.23□□□□□ -2.37
Trem1Q9JKE2 AC129085.1-201ENSMUST00000225263 165 ntBASIC0.23□□□□□ -2.37
Trem1Q9JKE2 Snord42a-201ENSMUST00000082606 65 ntBASIC0.23□□□□□ -2.37
Trem1Q9JKE2 Gm23412-201ENSMUST00000083017 107 ntBASIC0.23□□□□□ -2.37
Trem1Q9JKE2 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.22□□□□□ -2.37
Trem1Q9JKE2 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.22□□□□□ -2.37
Trem1Q9JKE2 Gm25878-201ENSMUST00000104327 93 ntBASIC0.22□□□□□ -2.37
Trem1Q9JKE2 Gm26301-201ENSMUST00000104813 95 ntBASIC0.22□□□□□ -2.37
Trem1Q9JKE2 Gm15289-201ENSMUST00000117793 244 ntBASIC0.22□□□□□ -2.37
Trem1Q9JKE2 Gm25044-201ENSMUST00000158603 104 ntBASIC0.22□□□□□ -2.37
Trem1Q9JKE2 Gm27475-201ENSMUST00000183420 61 ntBASIC0.22□□□□□ -2.37
Trem1Q9JKE2 Mir7065-201ENSMUST00000185110 61 ntBASIC0.22□□□□□ -2.37
Trem1Q9JKE2 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC0.22□□□□□ -2.37
Trem1Q9JKE2 Gm43406-201ENSMUST00000200356 334 ntBASIC0.22□□□□□ -2.37
Trem1Q9JKE2 Gm44419-201ENSMUST00000203338 229 ntBASIC0.22□□□□□ -2.37
Trem1Q9JKE2 Gm45541-201ENSMUST00000210443 54 ntBASIC0.22□□□□□ -2.37
Trem1Q9JKE2 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.21□□□□□ -2.38
Trem1Q9JKE2 Snord71-201ENSMUST00000104361 85 ntBASIC0.21□□□□□ -2.38
Trem1Q9JKE2 Gm12771-201ENSMUST00000120246 135 ntBASIC0.21□□□□□ -2.38
Trem1Q9JKE2 Gm23982-201ENSMUST00000157141 106 ntBASIC0.21□□□□□ -2.38
Trem1Q9JKE2 Gm22321-201ENSMUST00000157152 104 ntBASIC0.21□□□□□ -2.38
Trem1Q9JKE2 Gm26415-201ENSMUST00000157673 292 ntBASIC0.21□□□□□ -2.38
Trem1Q9JKE2 Gm22706-201ENSMUST00000157907 112 ntBASIC0.21□□□□□ -2.38
Trem1Q9JKE2 Gm22387-201ENSMUST00000158191 131 ntBASIC0.21□□□□□ -2.38
Trem1Q9JKE2 Gm22887-201ENSMUST00000178586 107 ntBASIC0.21□□□□□ -2.38
Trem1Q9JKE2 Mir6365-201ENSMUST00000183990 101 ntBASIC0.21□□□□□ -2.38
Trem1Q9JKE2 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC0.21□□□□□ -2.38
Trem1Q9JKE2 CT010454.1-201ENSMUST00000225975 265 ntBASIC0.21□□□□□ -2.38
Trem1Q9JKE2 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.21□□□□□ -2.38
Trem1Q9JKE2 n-R5s94-201ENSMUST00000082573 119 ntBASIC0.21□□□□□ -2.38
Trem1Q9JKE2 Mir448-201ENSMUST00000083516 112 ntBASIC0.21□□□□□ -2.38
Trem1Q9JKE2 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC0.21□□□□□ -2.38
Trem1Q9JKE2 Gm12837-201ENSMUST00000120131 373 ntBASIC0.2□□□□□ -2.38
Trem1Q9JKE2 Gm11835-201ENSMUST00000120635 663 ntBASIC0.2□□□□□ -2.38
Trem1Q9JKE2 Gm24015-201ENSMUST00000157725 232 ntBASIC0.2□□□□□ -2.38
Trem1Q9JKE2 Gm23640-201ENSMUST00000157860 104 ntBASIC0.2□□□□□ -2.38
Trem1Q9JKE2 Gm26116-201ENSMUST00000175600 77 ntBASIC0.2□□□□□ -2.38
Trem1Q9JKE2 Mir7014-201ENSMUST00000183853 63 ntBASIC0.2□□□□□ -2.38
Trem1Q9JKE2 Gm44828-201ENSMUST00000203745 106 ntBASIC0.2□□□□□ -2.38
Trem1Q9JKE2 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC0.2□□□□□ -2.38
Trem1Q9JKE2 AC159619.2-201ENSMUST00000222924 401 ntBASIC0.2□□□□□ -2.38
Trem1Q9JKE2 Snora20-201ENSMUST00000082703 128 ntBASIC0.2□□□□□ -2.38
Trem1Q9JKE2 Snord69-201ENSMUST00000104024 80 ntBASIC0.19□□□□□ -2.38
Trem1Q9JKE2 Gm24171-201ENSMUST00000104126 131 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 468.3 ms