Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm28808-201ENSMUST00000190978 313 ntBASIC1.76□□□□□ -2.13
Trim54Q9ERP3 Gm36189-201ENSMUST00000204113 523 ntBASIC1.76□□□□□ -2.13
Trim54Q9ERP3 Gm44057-201ENSMUST00000204547 96 ntBASIC1.76□□□□□ -2.13
Trim54Q9ERP3 Gm24375-201ENSMUST00000104397 132 ntBASIC1.75□□□□□ -2.13
Trim54Q9ERP3 Gm22621-201ENSMUST00000179678 74 ntBASIC1.75□□□□□ -2.13
Trim54Q9ERP3 Gm28344-201ENSMUST00000185704 279 ntBASIC1.75□□□□□ -2.13
Trim54Q9ERP3 Gm44325-201ENSMUST00000196757 77 ntBASIC1.75□□□□□ -2.13
Trim54Q9ERP3 Gm43199-201ENSMUST00000200019 307 ntBASIC1.75□□□□□ -2.13
Trim54Q9ERP3 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Trim54Q9ERP3 Gm25565-201ENSMUST00000104605 105 ntBASIC1.74□□□□□ -2.13
Trim54Q9ERP3 Gm15115-201ENSMUST00000121145 264 ntBASIC1.74□□□□□ -2.13
Trim54Q9ERP3 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.74□□□□□ -2.13
Trim54Q9ERP3 Gm25494-201ENSMUST00000158143 100 ntBASIC1.74□□□□□ -2.13
Trim54Q9ERP3 Gm24415-201ENSMUST00000180218 107 ntBASIC1.74□□□□□ -2.13
Trim54Q9ERP3 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.74□□□□□ -2.13
Trim54Q9ERP3 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.74□□□□□ -2.13
Trim54Q9ERP3 Gm45754-201ENSMUST00000212380 279 ntBASIC1.74□□□□□ -2.13
Trim54Q9ERP3 Gm25697-201ENSMUST00000082902 98 ntBASIC1.74□□□□□ -2.13
Trim54Q9ERP3 Gm24406-201ENSMUST00000083026 128 ntBASIC1.74□□□□□ -2.13
Trim54Q9ERP3 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC1.73□□□□□ -2.13
Trim54Q9ERP3 Gm23170-201ENSMUST00000157158 106 ntBASIC1.73□□□□□ -2.13
Trim54Q9ERP3 Gm22386-201ENSMUST00000158192 129 ntBASIC1.73□□□□□ -2.13
Trim54Q9ERP3 Gm28794-201ENSMUST00000185276 136 ntBASIC1.73□□□□□ -2.13
Trim54Q9ERP3 Gm37746-201ENSMUST00000193249 198 ntBASIC1.73□□□□□ -2.13
Trim54Q9ERP3 Gm44326-201ENSMUST00000198226 101 ntBASIC1.73□□□□□ -2.13
Trim54Q9ERP3 Gm44384-201ENSMUST00000200208 114 ntBASIC1.73□□□□□ -2.13
Trim54Q9ERP3 Mir466p-201ENSMUST00000103925 89 ntBASIC1.72□□□□□ -2.13
Trim54Q9ERP3 Mir873a-201ENSMUST00000104863 77 ntBASIC1.72□□□□□ -2.13
Trim54Q9ERP3 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.72□□□□□ -2.13
Trim54Q9ERP3 Gm25267-201ENSMUST00000158522 63 ntBASIC1.72□□□□□ -2.13
Trim54Q9ERP3 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.72□□□□□ -2.13
Trim54Q9ERP3 Gm22259-201ENSMUST00000178926 107 ntBASIC1.72□□□□□ -2.13
Trim54Q9ERP3 Gm21064-202ENSMUST00000190583 278 ntBASIC1.72□□□□□ -2.13
Trim54Q9ERP3 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Trim54Q9ERP3 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.72□□□□□ -2.13
Trim54Q9ERP3 Gm24165-201ENSMUST00000082718 128 ntBASIC1.72□□□□□ -2.13
Trim54Q9ERP3 Snord14a-201ENSMUST00000082807 87 ntBASIC1.72□□□□□ -2.13
Trim54Q9ERP3 Gm26004-201ENSMUST00000158804 116 ntBASIC1.71□□□□□ -2.14
Trim54Q9ERP3 Gm22686-201ENSMUST00000082847 100 ntBASIC1.71□□□□□ -2.14
Trim54Q9ERP3 Gm24762-201ENSMUST00000083689 104 ntBASIC1.71□□□□□ -2.14
Trim54Q9ERP3 n-R5s183-201ENSMUST00000083939 115 ntBASIC1.71□□□□□ -2.14
Trim54Q9ERP3 Gm23718-201ENSMUST00000157350 307 ntBASIC1.7□□□□□ -2.14
Trim54Q9ERP3 Gm25423-201ENSMUST00000157609 107 ntBASIC1.7□□□□□ -2.14
Trim54Q9ERP3 Gm23898-201ENSMUST00000158111 103 ntBASIC1.7□□□□□ -2.14
Trim54Q9ERP3 Gm25223-201ENSMUST00000158200 110 ntBASIC1.7□□□□□ -2.14
Trim54Q9ERP3 Gm24229-201ENSMUST00000158830 118 ntBASIC1.7□□□□□ -2.14
Trim54Q9ERP3 Gm43602-201ENSMUST00000196772 300 ntBASIC1.7□□□□□ -2.14
Trim54Q9ERP3 Gm25895-201ENSMUST00000083714 100 ntBASIC1.7□□□□□ -2.14
Trim54Q9ERP3 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Trim54Q9ERP3 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.69□□□□□ -2.14
Trim54Q9ERP3 Gm22603-201ENSMUST00000157603 96 ntBASIC1.69□□□□□ -2.14
Trim54Q9ERP3 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Trim54Q9ERP3 Gm22545-201ENSMUST00000104350 132 ntBASIC1.68□□□□□ -2.14
Trim54Q9ERP3 Gm6003-201ENSMUST00000187903 463 ntBASIC1.68□□□□□ -2.14
Trim54Q9ERP3 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.68□□□□□ -2.14
Trim54Q9ERP3 AC122320.1-201ENSMUST00000227233 105 ntBASIC1.68□□□□□ -2.14
Trim54Q9ERP3 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Trim54Q9ERP3 Gm22082-201ENSMUST00000157587 161 ntBASIC1.67□□□□□ -2.14
Trim54Q9ERP3 Gm23558-201ENSMUST00000157823 80 ntBASIC1.67□□□□□ -2.14
Trim54Q9ERP3 Mir1931-201ENSMUST00000158589 119 ntBASIC1.67□□□□□ -2.14
Trim54Q9ERP3 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC1.67□□□□□ -2.14
Trim54Q9ERP3 Gm25958-201ENSMUST00000175114 71 ntBASIC1.67□□□□□ -2.14
Trim54Q9ERP3 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Trim54Q9ERP3 Gm28409-201ENSMUST00000187064 103 ntBASIC1.67□□□□□ -2.14
Trim54Q9ERP3 Gm24929-201ENSMUST00000083403 139 ntBASIC1.67□□□□□ -2.14
Trim54Q9ERP3 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
Trim54Q9ERP3 Gm27047-201ENSMUST00000183072 1819 ntBASIC1.66□□□□□ -2.14
Trim54Q9ERP3 AC159625.1-201ENSMUST00000220994 2625 ntBASIC1.66□□□□□ -2.14
Trim54Q9ERP3 Gm24132-201ENSMUST00000104745 91 ntBASIC1.66□□□□□ -2.14
Trim54Q9ERP3 Gm22228-201ENSMUST00000157364 101 ntBASIC1.66□□□□□ -2.14
Trim54Q9ERP3 Gm24634-201ENSMUST00000158672 107 ntBASIC1.66□□□□□ -2.14
Trim54Q9ERP3 Gm24222-201ENSMUST00000158834 93 ntBASIC1.66□□□□□ -2.14
Trim54Q9ERP3 Gm27326-201ENSMUST00000183504 95 ntBASIC1.66□□□□□ -2.14
Trim54Q9ERP3 Mir7241-201ENSMUST00000184532 64 ntBASIC1.66□□□□□ -2.14
Trim54Q9ERP3 Gm9251-201ENSMUST00000197202 628 ntBASIC1.66□□□□□ -2.14
Trim54Q9ERP3 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.66□□□□□ -2.14
Trim54Q9ERP3 Mir490-201ENSMUST00000093567 84 ntBASIC1.66□□□□□ -2.14
Trim54Q9ERP3 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Trim54Q9ERP3 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.65□□□□□ -2.15
Trim54Q9ERP3 Gm44853-201ENSMUST00000209070 250 ntBASIC1.65□□□□□ -2.15
Trim54Q9ERP3 Gm46993-201ENSMUST00000220708 259 ntBASIC1.65□□□□□ -2.15
Trim54Q9ERP3 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.65□□□□□ -2.15
Trim54Q9ERP3 Gm26293-201ENSMUST00000104170 84 ntBASIC1.64□□□□□ -2.15
Trim54Q9ERP3 Gm23122-201ENSMUST00000157645 103 ntBASIC1.64□□□□□ -2.15
Trim54Q9ERP3 Mir6351-201ENSMUST00000183826 99 ntBASIC1.64□□□□□ -2.15
Trim54Q9ERP3 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.64□□□□□ -2.15
Trim54Q9ERP3 AC129085.1-201ENSMUST00000225263 165 ntBASIC1.64□□□□□ -2.15
Trim54Q9ERP3 Gm22306-201ENSMUST00000082692 107 ntBASIC1.64□□□□□ -2.15
Trim54Q9ERP3 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.63□□□□□ -2.15
Trim54Q9ERP3 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Trim54Q9ERP3 Gm24276-201ENSMUST00000102181 110 ntBASIC1.63□□□□□ -2.15
Trim54Q9ERP3 Gm25068-201ENSMUST00000103895 110 ntBASIC1.63□□□□□ -2.15
Trim54Q9ERP3 Gm23336-201ENSMUST00000117023 123 ntBASIC1.63□□□□□ -2.15
Trim54Q9ERP3 Gm25558-201ENSMUST00000158083 106 ntBASIC1.63□□□□□ -2.15
Trim54Q9ERP3 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.63□□□□□ -2.15
Trim54Q9ERP3 Gm27803-201ENSMUST00000183763 119 ntBASIC1.63□□□□□ -2.15
Trim54Q9ERP3 Gm27493-201ENSMUST00000184128 78 ntBASIC1.63□□□□□ -2.15
Trim54Q9ERP3 Gm27465-201ENSMUST00000184290 91 ntBASIC1.63□□□□□ -2.15
Trim54Q9ERP3 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC1.63□□□□□ -2.15
Trim54Q9ERP3 Gm25038-201ENSMUST00000082928 130 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 160.3 ms