Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm12647-201ENSMUST00000118977 265 ntBASIC0.33□□□□□ -2.36
Lima1Q9ERG0 Gm11834-201ENSMUST00000122257 585 ntBASIC0.33□□□□□ -2.36
Lima1Q9ERG0 Gm23584-201ENSMUST00000157655 129 ntBASIC0.33□□□□□ -2.36
Lima1Q9ERG0 Gm24192-201ENSMUST00000157978 145 ntBASIC0.33□□□□□ -2.36
Lima1Q9ERG0 Gm24000-201ENSMUST00000158063 89 ntBASIC0.33□□□□□ -2.36
Lima1Q9ERG0 Gm23262-201ENSMUST00000158323 168 ntBASIC0.33□□□□□ -2.36
Lima1Q9ERG0 Gm28927-201ENSMUST00000191528 272 ntBASIC0.33□□□□□ -2.36
Lima1Q9ERG0 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
Lima1Q9ERG0 Snord89-201ENSMUST00000104516 110 ntBASIC0.32□□□□□ -2.36
Lima1Q9ERG0 Gm25773-201ENSMUST00000116718 127 ntBASIC0.32□□□□□ -2.36
Lima1Q9ERG0 Gm24629-201ENSMUST00000122762 89 ntBASIC0.32□□□□□ -2.36
Lima1Q9ERG0 Gm23779-201ENSMUST00000157938 64 ntBASIC0.32□□□□□ -2.36
Lima1Q9ERG0 Gm25558-201ENSMUST00000158083 106 ntBASIC0.32□□□□□ -2.36
Lima1Q9ERG0 Gm24880-201ENSMUST00000158776 85 ntBASIC0.32□□□□□ -2.36
Lima1Q9ERG0 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.32□□□□□ -2.36
Lima1Q9ERG0 Gm26285-201ENSMUST00000177923 107 ntBASIC0.32□□□□□ -2.36
Lima1Q9ERG0 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
Lima1Q9ERG0 Gm23793-201ENSMUST00000179396 117 ntBASIC0.32□□□□□ -2.36
Lima1Q9ERG0 Gm27317-201ENSMUST00000183533 95 ntBASIC0.32□□□□□ -2.36
Lima1Q9ERG0 Mir7093-201ENSMUST00000184195 101 ntBASIC0.32□□□□□ -2.36
Lima1Q9ERG0 Gm37338-201ENSMUST00000191986 127 ntBASIC0.32□□□□□ -2.36
Lima1Q9ERG0 Gm37997-201ENSMUST00000193515 267 ntBASIC0.32□□□□□ -2.36
Lima1Q9ERG0 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.32□□□□□ -2.36
Lima1Q9ERG0 AC132437.1-201ENSMUST00000218308 320 ntBASIC0.32□□□□□ -2.36
Lima1Q9ERG0 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.32□□□□□ -2.36
Lima1Q9ERG0 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.32□□□□□ -2.36
Lima1Q9ERG0 Gm23622-201ENSMUST00000082460 107 ntBASIC0.32□□□□□ -2.36
Lima1Q9ERG0 Gm22283-201ENSMUST00000082556 161 ntBASIC0.32□□□□□ -2.36
Lima1Q9ERG0 Gm23969-201ENSMUST00000083324 74 ntBASIC0.32□□□□□ -2.36
Lima1Q9ERG0 Gm25937-201ENSMUST00000083912 107 ntBASIC0.32□□□□□ -2.36
Lima1Q9ERG0 n-R5s183-201ENSMUST00000083939 115 ntBASIC0.32□□□□□ -2.36
Lima1Q9ERG0 Gm10730-201ENSMUST00000194097 2723 ntBASIC0.32□□□□□ -2.36
Lima1Q9ERG0 Gm22786-201ENSMUST00000104086 122 ntBASIC0.31□□□□□ -2.36
Lima1Q9ERG0 Gm26303-201ENSMUST00000116845 119 ntBASIC0.31□□□□□ -2.36
Lima1Q9ERG0 Gm14307-201ENSMUST00000118930 291 ntBASIC0.31□□□□□ -2.36
Lima1Q9ERG0 Gm14946-201ENSMUST00000119859 296 ntBASIC0.31□□□□□ -2.36
Lima1Q9ERG0 Gm14297-201ENSMUST00000129110 291 ntBASIC0.31□□□□□ -2.36
Lima1Q9ERG0 Gm16362-201ENSMUST00000135189 214 ntBASIC0.31□□□□□ -2.36
Lima1Q9ERG0 Mir3535-201ENSMUST00000197651 147 ntBASIC0.31□□□□□ -2.36
Lima1Q9ERG0 Gm25138-201ENSMUST00000083248 136 ntBASIC0.31□□□□□ -2.36
Lima1Q9ERG0 Mir709-201ENSMUST00000102190 88 ntBASIC0.3□□□□□ -2.36
Lima1Q9ERG0 Gm25393-201ENSMUST00000157336 285 ntBASIC0.3□□□□□ -2.36
Lima1Q9ERG0 Gm26152-201ENSMUST00000157427 101 ntBASIC0.3□□□□□ -2.36
Lima1Q9ERG0 Gm16539-201ENSMUST00000160086 327 ntBASIC0.3□□□□□ -2.36
Lima1Q9ERG0 Gm26073-201ENSMUST00000179906 127 ntBASIC0.3□□□□□ -2.36
Lima1Q9ERG0 Gm44488-201ENSMUST00000199467 119 ntBASIC0.3□□□□□ -2.36
Lima1Q9ERG0 Gm29818-201ENSMUST00000218070 165 ntBASIC0.3□□□□□ -2.36
Lima1Q9ERG0 Gm30155-201ENSMUST00000223458 339 ntBASIC0.3□□□□□ -2.36
Lima1Q9ERG0 AC115735.2-201ENSMUST00000227135 351 ntBASIC0.3□□□□□ -2.36
Lima1Q9ERG0 Rny3-201ENSMUST00000083011 102 ntBASIC0.3□□□□□ -2.36
Lima1Q9ERG0 Gm22421-201ENSMUST00000083058 107 ntBASIC0.3□□□□□ -2.36
Lima1Q9ERG0 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.3□□□□□ -2.36
Lima1Q9ERG0 Gm24345-201ENSMUST00000158706 124 ntBASIC0.29□□□□□ -2.36
Lima1Q9ERG0 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC0.29□□□□□ -2.36
Lima1Q9ERG0 Gm44052-201ENSMUST00000203382 396 ntBASIC0.29□□□□□ -2.36
Lima1Q9ERG0 Gm45471-201ENSMUST00000211270 281 ntBASIC0.29□□□□□ -2.36
Lima1Q9ERG0 AC132615.1-201ENSMUST00000213873 255 ntBASIC0.29□□□□□ -2.36
Lima1Q9ERG0 Gm24616-201ENSMUST00000083274 139 ntBASIC0.29□□□□□ -2.36
Lima1Q9ERG0 Mir500-201ENSMUST00000093600 92 ntBASIC0.29□□□□□ -2.36
Lima1Q9ERG0 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
Lima1Q9ERG0 Gm6272-201ENSMUST00000121256 171 ntBASIC0.28□□□□□ -2.36
Lima1Q9ERG0 Gm23024-201ENSMUST00000158770 292 ntBASIC0.28□□□□□ -2.36
Lima1Q9ERG0 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC0.28□□□□□ -2.36
Lima1Q9ERG0 Gm37763-201ENSMUST00000193445 120 ntBASIC0.28□□□□□ -2.36
Lima1Q9ERG0 AC164297.5-201ENSMUST00000224365 198 ntBASIC0.28□□□□□ -2.36
Lima1Q9ERG0 Gm26326-201ENSMUST00000083070 129 ntBASIC0.28□□□□□ -2.36
Lima1Q9ERG0 Gm26495-201ENSMUST00000083152 137 ntBASIC0.28□□□□□ -2.36
Lima1Q9ERG0 Gm23060-201ENSMUST00000102345 109 ntBASIC0.27□□□□□ -2.37
Lima1Q9ERG0 Gm23126-201ENSMUST00000104260 134 ntBASIC0.27□□□□□ -2.37
Lima1Q9ERG0 Gm26474-201ENSMUST00000116762 122 ntBASIC0.27□□□□□ -2.37
Lima1Q9ERG0 Gm26274-201ENSMUST00000157103 321 ntBASIC0.27□□□□□ -2.37
Lima1Q9ERG0 Gm22814-201ENSMUST00000157452 104 ntBASIC0.27□□□□□ -2.37
Lima1Q9ERG0 Gm22085-201ENSMUST00000158344 110 ntBASIC0.27□□□□□ -2.37
Lima1Q9ERG0 Gm16546-201ENSMUST00000159442 355 ntBASIC0.27□□□□□ -2.37
Lima1Q9ERG0 Gm26116-201ENSMUST00000175600 77 ntBASIC0.27□□□□□ -2.37
Lima1Q9ERG0 Gm28669-201ENSMUST00000188400 100 ntBASIC0.27□□□□□ -2.37
Lima1Q9ERG0 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
Lima1Q9ERG0 Gm44419-201ENSMUST00000203338 229 ntBASIC0.27□□□□□ -2.37
Lima1Q9ERG0 Gm43976-201ENSMUST00000203637 235 ntBASIC0.27□□□□□ -2.37
Lima1Q9ERG0 Gm44687-201ENSMUST00000204975 235 ntBASIC0.27□□□□□ -2.37
Lima1Q9ERG0 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.27□□□□□ -2.37
Lima1Q9ERG0 Gm24043-201ENSMUST00000083108 116 ntBASIC0.27□□□□□ -2.37
Lima1Q9ERG0 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.27□□□□□ -2.37
Lima1Q9ERG0 Gm23321-201ENSMUST00000104465 126 ntBASIC0.26□□□□□ -2.37
Lima1Q9ERG0 Gm24476-201ENSMUST00000157437 131 ntBASIC0.26□□□□□ -2.37
Lima1Q9ERG0 Gm22801-201ENSMUST00000175624 84 ntBASIC0.26□□□□□ -2.37
Lima1Q9ERG0 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC0.26□□□□□ -2.37
Lima1Q9ERG0 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC0.26□□□□□ -2.37
Lima1Q9ERG0 Gm23404-201ENSMUST00000082543 97 ntBASIC0.26□□□□□ -2.37
Lima1Q9ERG0 Snord42a-201ENSMUST00000082606 65 ntBASIC0.26□□□□□ -2.37
Lima1Q9ERG0 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC0.26□□□□□ -2.37
Lima1Q9ERG0 Mir451a-201ENSMUST00000093557 72 ntBASIC0.26□□□□□ -2.37
Lima1Q9ERG0 Gm25416-201ENSMUST00000104221 107 ntBASIC0.25□□□□□ -2.37
Lima1Q9ERG0 Gm25878-201ENSMUST00000104327 93 ntBASIC0.25□□□□□ -2.37
Lima1Q9ERG0 Gm24015-201ENSMUST00000157725 232 ntBASIC0.25□□□□□ -2.37
Lima1Q9ERG0 Gm22706-201ENSMUST00000157907 112 ntBASIC0.25□□□□□ -2.37
Lima1Q9ERG0 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC0.25□□□□□ -2.37
Lima1Q9ERG0 Gm44057-201ENSMUST00000204547 96 ntBASIC0.25□□□□□ -2.37
Lima1Q9ERG0 Gm44211-201ENSMUST00000204867 145 ntBASIC0.25□□□□□ -2.37
Lima1Q9ERG0 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 132.8 ms