Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC1.01□□□□□ -2.25
Scn4aQ9ER60 Gm25204-201ENSMUST00000082843 106 ntBASIC1.01□□□□□ -2.25
Scn4aQ9ER60 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.01□□□□□ -2.25
Scn4aQ9ER60 Gm25875-201ENSMUST00000104323 107 ntBASIC1.01□□□□□ -2.25
Scn4aQ9ER60 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC1.01□□□□□ -2.25
Scn4aQ9ER60 Gm22164-201ENSMUST00000158413 106 ntBASIC1.01□□□□□ -2.25
Scn4aQ9ER60 Gm23024-201ENSMUST00000158770 292 ntBASIC1.01□□□□□ -2.25
Scn4aQ9ER60 Gm10222-201ENSMUST00000088336 294 ntBASIC1.01□□□□□ -2.25
Scn4aQ9ER60 Gm12785-201ENSMUST00000122052 172 ntBASIC1□□□□□ -2.25
Scn4aQ9ER60 n-R5s188-201ENSMUST00000122646 105 ntBASIC1□□□□□ -2.25
Scn4aQ9ER60 Gm22836-201ENSMUST00000158441 61 ntBASIC1□□□□□ -2.25
Scn4aQ9ER60 Gm21088-201ENSMUST00000190875 316 ntBASIC1□□□□□ -2.25
Scn4aQ9ER60 Gm29665-201ENSMUST00000191457 528 ntBASIC1□□□□□ -2.25
Scn4aQ9ER60 Gm23245-201ENSMUST00000083370 135 ntBASIC1□□□□□ -2.25
Scn4aQ9ER60 Mir155-201ENSMUST00000083463 65 ntBASIC1□□□□□ -2.25
Scn4aQ9ER60 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
Scn4aQ9ER60 Gm23531-201ENSMUST00000104567 68 ntBASIC0.99□□□□□ -2.25
Scn4aQ9ER60 Mir669i-201ENSMUST00000117007 127 ntBASIC0.99□□□□□ -2.25
Scn4aQ9ER60 Gm12449-201ENSMUST00000117572 234 ntBASIC0.99□□□□□ -2.25
Scn4aQ9ER60 Gm23898-201ENSMUST00000158111 103 ntBASIC0.99□□□□□ -2.25
Scn4aQ9ER60 Gm25643-201ENSMUST00000158874 103 ntBASIC0.99□□□□□ -2.25
Scn4aQ9ER60 Gm24523-201ENSMUST00000083965 132 ntBASIC0.99□□□□□ -2.25
Scn4aQ9ER60 AC164297.1-201ENSMUST00000224484 1561 ntBASIC0.99□□□□□ -2.25
Scn4aQ9ER60 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.99□□□□□ -2.25
Scn4aQ9ER60 Gm24501-201ENSMUST00000158452 62 ntBASIC0.99□□□□□ -2.25
Scn4aQ9ER60 Gm22425-201ENSMUST00000158532 138 ntBASIC0.99□□□□□ -2.25
Scn4aQ9ER60 Gm44921-201ENSMUST00000205290 301 ntBASIC0.99□□□□□ -2.25
Scn4aQ9ER60 Gm45005-201ENSMUST00000206640 157 ntBASIC0.99□□□□□ -2.25
Scn4aQ9ER60 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC0.99□□□□□ -2.25
Scn4aQ9ER60 CT954323.1-201ENSMUST00000222774 229 ntBASIC0.99□□□□□ -2.25
Scn4aQ9ER60 Gm25111-201ENSMUST00000116686 147 ntBASIC0.98□□□□□ -2.25
Scn4aQ9ER60 Gm25848-201ENSMUST00000116790 144 ntBASIC0.98□□□□□ -2.25
Scn4aQ9ER60 Gm22216-201ENSMUST00000157557 114 ntBASIC0.98□□□□□ -2.25
Scn4aQ9ER60 Mir1967-201ENSMUST00000157789 82 ntBASIC0.98□□□□□ -2.25
Scn4aQ9ER60 Gm25949-201ENSMUST00000175333 114 ntBASIC0.98□□□□□ -2.25
Scn4aQ9ER60 Gm22118-201ENSMUST00000175593 171 ntBASIC0.98□□□□□ -2.25
Scn4aQ9ER60 Gm44858-201ENSMUST00000207360 154 ntBASIC0.98□□□□□ -2.25
Scn4aQ9ER60 CT010454.1-201ENSMUST00000225975 265 ntBASIC0.98□□□□□ -2.25
Scn4aQ9ER60 Gm25627-201ENSMUST00000084003 153 ntBASIC0.98□□□□□ -2.25
Scn4aQ9ER60 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
Scn4aQ9ER60 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
Scn4aQ9ER60 Gm15213-201ENSMUST00000122098 216 ntBASIC0.97□□□□□ -2.25
Scn4aQ9ER60 Gm23182-201ENSMUST00000158688 135 ntBASIC0.97□□□□□ -2.25
Scn4aQ9ER60 Gm25750-201ENSMUST00000175483 112 ntBASIC0.97□□□□□ -2.25
Scn4aQ9ER60 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
Scn4aQ9ER60 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC0.97□□□□□ -2.25
Scn4aQ9ER60 Gm28661-201ENSMUST00000188231 681 ntBASIC0.97□□□□□ -2.25
Scn4aQ9ER60 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC0.97□□□□□ -2.25
Scn4aQ9ER60 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.97□□□□□ -2.25
Scn4aQ9ER60 CT025630.1-201ENSMUST00000227901 172 ntBASIC0.97□□□□□ -2.25
Scn4aQ9ER60 Gm24271-201ENSMUST00000102327 111 ntBASIC0.96□□□□□ -2.26
Scn4aQ9ER60 Gm22477-201ENSMUST00000122569 316 ntBASIC0.96□□□□□ -2.26
Scn4aQ9ER60 Gm23106-201ENSMUST00000157554 101 ntBASIC0.96□□□□□ -2.26
Scn4aQ9ER60 Gm29014-201ENSMUST00000191422 326 ntBASIC0.96□□□□□ -2.26
Scn4aQ9ER60 Mir6896-201ENSMUST00000198033 73 ntBASIC0.96□□□□□ -2.26
Scn4aQ9ER60 Gm27420-201ENSMUST00000183823 79 ntBASIC0.96□□□□□ -2.26
Scn4aQ9ER60 Gm20118-201ENSMUST00000187207 162 ntBASIC0.96□□□□□ -2.26
Scn4aQ9ER60 Mir376a-201ENSMUST00000197584 68 ntBASIC0.96□□□□□ -2.26
Scn4aQ9ER60 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC0.96□□□□□ -2.26
Scn4aQ9ER60 AC145736.2-201ENSMUST00000216305 365 ntBASIC0.96□□□□□ -2.26
Scn4aQ9ER60 Gm25683-201ENSMUST00000083940 131 ntBASIC0.96□□□□□ -2.26
Scn4aQ9ER60 Gm23492-201ENSMUST00000116837 115 ntBASIC0.95□□□□□ -2.26
Scn4aQ9ER60 Gm11334-201ENSMUST00000121969 156 ntBASIC0.95□□□□□ -2.26
Scn4aQ9ER60 Gm23536-201ENSMUST00000157541 134 ntBASIC0.95□□□□□ -2.26
Scn4aQ9ER60 Gm22097-201ENSMUST00000157929 278 ntBASIC0.95□□□□□ -2.26
Scn4aQ9ER60 Gm43199-201ENSMUST00000200019 307 ntBASIC0.95□□□□□ -2.26
Scn4aQ9ER60 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC0.95□□□□□ -2.26
Scn4aQ9ER60 Gm43976-201ENSMUST00000203637 235 ntBASIC0.95□□□□□ -2.26
Scn4aQ9ER60 Gm44687-201ENSMUST00000204975 235 ntBASIC0.95□□□□□ -2.26
Scn4aQ9ER60 Mir181a-2-201ENSMUST00000083489 76 ntBASIC0.95□□□□□ -2.26
Scn4aQ9ER60 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
Scn4aQ9ER60 Gm23665-201ENSMUST00000158054 62 ntBASIC0.94□□□□□ -2.26
Scn4aQ9ER60 Gm23571-201ENSMUST00000180073 127 ntBASIC0.94□□□□□ -2.26
Scn4aQ9ER60 Gm28409-201ENSMUST00000187064 103 ntBASIC0.94□□□□□ -2.26
Scn4aQ9ER60 Gm29140-201ENSMUST00000190187 476 ntBASIC0.94□□□□□ -2.26
Scn4aQ9ER60 Gm42719-201ENSMUST00000197393 355 ntBASIC0.94□□□□□ -2.26
Scn4aQ9ER60 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.94□□□□□ -2.26
Scn4aQ9ER60 AC192333.1-201ENSMUST00000224573 376 ntBASIC0.94□□□□□ -2.26
Scn4aQ9ER60 Gm23039-201ENSMUST00000083870 161 ntBASIC0.94□□□□□ -2.26
Scn4aQ9ER60 Gm15069-201ENSMUST00000117792 192 ntBASIC0.94□□□□□ -2.26
Scn4aQ9ER60 Gm15068-201ENSMUST00000119796 192 ntBASIC0.94□□□□□ -2.26
Scn4aQ9ER60 Gm24595-201ENSMUST00000122501 110 ntBASIC0.94□□□□□ -2.26
Scn4aQ9ER60 Gm6105-201ENSMUST00000200580 624 ntBASIC0.94□□□□□ -2.26
Scn4aQ9ER60 Gm22743-201ENSMUST00000083445 133 ntBASIC0.94□□□□□ -2.26
Scn4aQ9ER60 Gm25650-201ENSMUST00000083784 162 ntBASIC0.94□□□□□ -2.26
Scn4aQ9ER60 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
Scn4aQ9ER60 Gm14568-201ENSMUST00000119321 294 ntBASIC0.93□□□□□ -2.26
Scn4aQ9ER60 Gm22883-201ENSMUST00000157376 106 ntBASIC0.93□□□□□ -2.26
Scn4aQ9ER60 Gm25884-201ENSMUST00000157782 62 ntBASIC0.93□□□□□ -2.26
Scn4aQ9ER60 Gm25935-201ENSMUST00000178746 107 ntBASIC0.93□□□□□ -2.26
Scn4aQ9ER60 Mir7091-201ENSMUST00000184075 79 ntBASIC0.93□□□□□ -2.26
Scn4aQ9ER60 Gm20923-201ENSMUST00000190009 319 ntBASIC0.93□□□□□ -2.26
Scn4aQ9ER60 Gm45508-201ENSMUST00000209298 299 ntBASIC0.93□□□□□ -2.26
Scn4aQ9ER60 AC157476.1-201ENSMUST00000215555 169 ntBASIC0.93□□□□□ -2.26
Scn4aQ9ER60 AC116460.1-201ENSMUST00000219040 313 ntBASIC0.93□□□□□ -2.26
Scn4aQ9ER60 Mir490-201ENSMUST00000093567 84 ntBASIC0.93□□□□□ -2.26
Scn4aQ9ER60 Gm25878-201ENSMUST00000104327 93 ntBASIC0.92□□□□□ -2.26
Scn4aQ9ER60 Gm11794-201ENSMUST00000119446 237 ntBASIC0.92□□□□□ -2.26
Scn4aQ9ER60 Gm22479-201ENSMUST00000122566 81 ntBASIC0.92□□□□□ -2.26
Scn4aQ9ER60 Gm23996-201ENSMUST00000158062 131 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 209.9 ms