Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm28330-201ENSMUST00000190353 171 ntBASIC0.42□□□□□ -2.34
Ccdc3Q9D6Y1 Gm44828-201ENSMUST00000203745 106 ntBASIC0.42□□□□□ -2.34
Ccdc3Q9D6Y1 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC0.42□□□□□ -2.34
Ccdc3Q9D6Y1 Gm22809-201ENSMUST00000082743 156 ntBASIC0.42□□□□□ -2.34
Ccdc3Q9D6Y1 Mir101a-201ENSMUST00000083517 83 ntBASIC0.42□□□□□ -2.34
Ccdc3Q9D6Y1 Gm23039-201ENSMUST00000083870 161 ntBASIC0.42□□□□□ -2.34
Ccdc3Q9D6Y1 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
Ccdc3Q9D6Y1 Gm24375-201ENSMUST00000104397 132 ntBASIC0.41□□□□□ -2.34
Ccdc3Q9D6Y1 Gm25773-201ENSMUST00000116718 127 ntBASIC0.41□□□□□ -2.34
Ccdc3Q9D6Y1 Gm14761-201ENSMUST00000121363 262 ntBASIC0.41□□□□□ -2.34
Ccdc3Q9D6Y1 Gm25982-201ENSMUST00000157920 101 ntBASIC0.41□□□□□ -2.34
Ccdc3Q9D6Y1 Mir1961-201ENSMUST00000158643 112 ntBASIC0.41□□□□□ -2.34
Ccdc3Q9D6Y1 Gm22914-201ENSMUST00000175195 77 ntBASIC0.41□□□□□ -2.34
Ccdc3Q9D6Y1 Mir3079-201ENSMUST00000175428 90 ntBASIC0.41□□□□□ -2.34
Ccdc3Q9D6Y1 Gm27980-201ENSMUST00000184094 169 ntBASIC0.41□□□□□ -2.34
Ccdc3Q9D6Y1 Gm28256-201ENSMUST00000188953 139 ntBASIC0.41□□□□□ -2.34
Ccdc3Q9D6Y1 Gm28559-201ENSMUST00000190532 139 ntBASIC0.41□□□□□ -2.34
Ccdc3Q9D6Y1 Gm43432-201ENSMUST00000196352 121 ntBASIC0.41□□□□□ -2.34
Ccdc3Q9D6Y1 Gm34783-201ENSMUST00000209159 303 ntBASIC0.41□□□□□ -2.34
Ccdc3Q9D6Y1 Gm45616-201ENSMUST00000211711 319 ntBASIC0.41□□□□□ -2.34
Ccdc3Q9D6Y1 Mir34a-201ENSMUST00000083559 102 ntBASIC0.41□□□□□ -2.34
Ccdc3Q9D6Y1 Gm22759-201ENSMUST00000102276 96 ntBASIC0.4□□□□□ -2.35
Ccdc3Q9D6Y1 Gm14298-201ENSMUST00000139032 237 ntBASIC0.4□□□□□ -2.35
Ccdc3Q9D6Y1 Gm16356-201ENSMUST00000143300 169 ntBASIC0.4□□□□□ -2.35
Ccdc3Q9D6Y1 Gm25968-201ENSMUST00000157167 100 ntBASIC0.4□□□□□ -2.35
Ccdc3Q9D6Y1 Gm23536-201ENSMUST00000157541 134 ntBASIC0.4□□□□□ -2.35
Ccdc3Q9D6Y1 Gm23779-201ENSMUST00000157938 64 ntBASIC0.4□□□□□ -2.35
Ccdc3Q9D6Y1 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC0.4□□□□□ -2.35
Ccdc3Q9D6Y1 Gm20923-201ENSMUST00000190009 319 ntBASIC0.4□□□□□ -2.35
Ccdc3Q9D6Y1 Gm21088-201ENSMUST00000190875 316 ntBASIC0.4□□□□□ -2.35
Ccdc3Q9D6Y1 Gm29818-201ENSMUST00000218070 165 ntBASIC0.4□□□□□ -2.35
Ccdc3Q9D6Y1 AC153526.1-201ENSMUST00000219750 190 ntBASIC0.4□□□□□ -2.35
Ccdc3Q9D6Y1 AC164297.5-201ENSMUST00000224365 198 ntBASIC0.4□□□□□ -2.35
Ccdc3Q9D6Y1 Gm23404-201ENSMUST00000082543 97 ntBASIC0.4□□□□□ -2.35
Ccdc3Q9D6Y1 Gm24208-201ENSMUST00000082783 135 ntBASIC0.4□□□□□ -2.35
Ccdc3Q9D6Y1 Gm24164-201ENSMUST00000093663 104 ntBASIC0.4□□□□□ -2.35
Ccdc3Q9D6Y1 Gm12647-201ENSMUST00000118977 265 ntBASIC0.39□□□□□ -2.35
Ccdc3Q9D6Y1 Gm14884-201ENSMUST00000120456 196 ntBASIC0.39□□□□□ -2.35
Ccdc3Q9D6Y1 Gm24594-201ENSMUST00000122502 99 ntBASIC0.39□□□□□ -2.35
Ccdc3Q9D6Y1 n-R5s73-201ENSMUST00000122508 107 ntBASIC0.39□□□□□ -2.35
Ccdc3Q9D6Y1 Gm26484-201ENSMUST00000158018 106 ntBASIC0.39□□□□□ -2.35
Ccdc3Q9D6Y1 Mir1931-201ENSMUST00000158589 119 ntBASIC0.39□□□□□ -2.35
Ccdc3Q9D6Y1 Gm27607-201ENSMUST00000185162 122 ntBASIC0.39□□□□□ -2.35
Ccdc3Q9D6Y1 AC154296.2-201ENSMUST00000214696 545 ntBASIC0.39□□□□□ -2.35
Ccdc3Q9D6Y1 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.39□□□□□ -2.35
Ccdc3Q9D6Y1 Gm22248-201ENSMUST00000082482 150 ntBASIC0.39□□□□□ -2.35
Ccdc3Q9D6Y1 Gm23584-201ENSMUST00000157655 129 ntBASIC0.38□□□□□ -2.35
Ccdc3Q9D6Y1 Gm23665-201ENSMUST00000158054 62 ntBASIC0.38□□□□□ -2.35
Ccdc3Q9D6Y1 Mir7077-201ENSMUST00000183991 57 ntBASIC0.38□□□□□ -2.35
Ccdc3Q9D6Y1 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
Ccdc3Q9D6Y1 Gm43563-201ENSMUST00000196761 198 ntBASIC0.38□□□□□ -2.35
Ccdc3Q9D6Y1 Gm44948-201ENSMUST00000209050 149 ntBASIC0.38□□□□□ -2.35
Ccdc3Q9D6Y1 AC109212.1-201ENSMUST00000215561 427 ntBASIC0.38□□□□□ -2.35
Ccdc3Q9D6Y1 CT010454.1-201ENSMUST00000225975 265 ntBASIC0.38□□□□□ -2.35
Ccdc3Q9D6Y1 Gm26495-201ENSMUST00000083152 137 ntBASIC0.38□□□□□ -2.35
Ccdc3Q9D6Y1 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.38□□□□□ -2.35
Ccdc3Q9D6Y1 Mir224-201ENSMUST00000083608 82 ntBASIC0.38□□□□□ -2.35
Ccdc3Q9D6Y1 n-R5s183-201ENSMUST00000083939 115 ntBASIC0.38□□□□□ -2.35
Ccdc3Q9D6Y1 Mir880-201ENSMUST00000104809 78 ntBASIC0.37□□□□□ -2.35
Ccdc3Q9D6Y1 Gm22032-201ENSMUST00000116946 116 ntBASIC0.37□□□□□ -2.35
Ccdc3Q9D6Y1 Gm14307-201ENSMUST00000118930 291 ntBASIC0.37□□□□□ -2.35
Ccdc3Q9D6Y1 Gm14297-201ENSMUST00000129110 291 ntBASIC0.37□□□□□ -2.35
Ccdc3Q9D6Y1 Gm16362-201ENSMUST00000135189 214 ntBASIC0.37□□□□□ -2.35
Ccdc3Q9D6Y1 Gm23101-201ENSMUST00000157550 137 ntBASIC0.37□□□□□ -2.35
Ccdc3Q9D6Y1 Gm25949-201ENSMUST00000175333 114 ntBASIC0.37□□□□□ -2.35
Ccdc3Q9D6Y1 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.37□□□□□ -2.35
Ccdc3Q9D6Y1 Gm27289-201ENSMUST00000183341 82 ntBASIC0.37□□□□□ -2.35
Ccdc3Q9D6Y1 Mir6896-201ENSMUST00000198033 73 ntBASIC0.37□□□□□ -2.35
Ccdc3Q9D6Y1 AC098718.2-201ENSMUST00000226822 285 ntBASIC0.37□□□□□ -2.35
Ccdc3Q9D6Y1 AC115735.2-201ENSMUST00000227135 351 ntBASIC0.37□□□□□ -2.35
Ccdc3Q9D6Y1 Gm23969-201ENSMUST00000083324 74 ntBASIC0.37□□□□□ -2.35
Ccdc3Q9D6Y1 Gm22365-201ENSMUST00000093750 117 ntBASIC0.37□□□□□ -2.35
Ccdc3Q9D6Y1 Gm22786-201ENSMUST00000104086 122 ntBASIC0.36□□□□□ -2.35
Ccdc3Q9D6Y1 Gm26421-201ENSMUST00000104279 132 ntBASIC0.36□□□□□ -2.35
Ccdc3Q9D6Y1 Gm24211-201ENSMUST00000158264 107 ntBASIC0.36□□□□□ -2.35
Ccdc3Q9D6Y1 Gm22085-201ENSMUST00000158344 110 ntBASIC0.36□□□□□ -2.35
Ccdc3Q9D6Y1 Gm23180-201ENSMUST00000158686 125 ntBASIC0.36□□□□□ -2.35
Ccdc3Q9D6Y1 Gm26073-201ENSMUST00000179906 127 ntBASIC0.36□□□□□ -2.35
Ccdc3Q9D6Y1 Mir465d-201ENSMUST00000196314 58 ntBASIC0.36□□□□□ -2.35
Ccdc3Q9D6Y1 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
Ccdc3Q9D6Y1 n-R5s94-201ENSMUST00000082573 119 ntBASIC0.36□□□□□ -2.35
Ccdc3Q9D6Y1 Gm23412-201ENSMUST00000083017 107 ntBASIC0.36□□□□□ -2.35
Ccdc3Q9D6Y1 Gm25937-201ENSMUST00000083912 107 ntBASIC0.36□□□□□ -2.35
Ccdc3Q9D6Y1 Gm26111-201ENSMUST00000083969 106 ntBASIC0.36□□□□□ -2.35
Ccdc3Q9D6Y1 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
Ccdc3Q9D6Y1 Gm6985-201ENSMUST00000121255 271 ntBASIC0.35□□□□□ -2.35
Ccdc3Q9D6Y1 Gm24015-201ENSMUST00000157725 232 ntBASIC0.35□□□□□ -2.35
Ccdc3Q9D6Y1 Gm22200-201ENSMUST00000158614 67 ntBASIC0.35□□□□□ -2.35
Ccdc3Q9D6Y1 Gm24345-201ENSMUST00000158706 124 ntBASIC0.35□□□□□ -2.35
Ccdc3Q9D6Y1 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC0.35□□□□□ -2.35
Ccdc3Q9D6Y1 Gm43624-201ENSMUST00000197368 180 ntBASIC0.35□□□□□ -2.35
Ccdc3Q9D6Y1 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC0.35□□□□□ -2.35
Ccdc3Q9D6Y1 Gm44488-201ENSMUST00000199467 119 ntBASIC0.35□□□□□ -2.35
Ccdc3Q9D6Y1 Gm44419-201ENSMUST00000203338 229 ntBASIC0.35□□□□□ -2.35
Ccdc3Q9D6Y1 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.35□□□□□ -2.35
Ccdc3Q9D6Y1 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.34□□□□□ -2.35
Ccdc3Q9D6Y1 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC0.34□□□□□ -2.35
Ccdc3Q9D6Y1 Snord89-201ENSMUST00000104516 110 ntBASIC0.34□□□□□ -2.36
Ccdc3Q9D6Y1 Gm26303-201ENSMUST00000116845 119 ntBASIC0.34□□□□□ -2.36
Ccdc3Q9D6Y1 Gm13711-201ENSMUST00000119708 453 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 149 ms