Protein–RNA interactions for Protein: Q9D5Y1

Ccdc39, Coiled-coil domain-containing protein 39, mousemouse

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39Q9D5Y1 Gm23390-201ENSMUST00000157393 106 ntBASIC1.48□□□□□ -2.17
Ccdc39Q9D5Y1 Gm23101-201ENSMUST00000157550 137 ntBASIC1.48□□□□□ -2.17
Ccdc39Q9D5Y1 Mir1967-201ENSMUST00000157789 82 ntBASIC1.48□□□□□ -2.17
Ccdc39Q9D5Y1 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC1.48□□□□□ -2.17
Ccdc39Q9D5Y1 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC1.48□□□□□ -2.17
Ccdc39Q9D5Y1 Gm43911-201ENSMUST00000203097 76 ntBASIC1.48□□□□□ -2.17
Ccdc39Q9D5Y1 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.48□□□□□ -2.17
Ccdc39Q9D5Y1 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.48□□□□□ -2.17
Ccdc39Q9D5Y1 AC154213.2-201ENSMUST00000227138 187 ntBASIC1.48□□□□□ -2.17
Ccdc39Q9D5Y1 Gm26225-201ENSMUST00000082508 135 ntBASIC1.48□□□□□ -2.17
Ccdc39Q9D5Y1 Gm22421-201ENSMUST00000083058 107 ntBASIC1.48□□□□□ -2.17
Ccdc39Q9D5Y1 Gm25409-201ENSMUST00000083764 131 ntBASIC1.48□□□□□ -2.17
Ccdc39Q9D5Y1 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.47□□□□□ -2.17
Ccdc39Q9D5Y1 Gm14491-201ENSMUST00000121919 199 ntBASIC1.47□□□□□ -2.17
Ccdc39Q9D5Y1 Gm24594-201ENSMUST00000122502 99 ntBASIC1.47□□□□□ -2.17
Ccdc39Q9D5Y1 Gm23584-201ENSMUST00000157655 129 ntBASIC1.47□□□□□ -2.17
Ccdc39Q9D5Y1 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.47□□□□□ -2.17
Ccdc39Q9D5Y1 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Ccdc39Q9D5Y1 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC1.47□□□□□ -2.17
Ccdc39Q9D5Y1 Gm6105-201ENSMUST00000200580 624 ntBASIC1.47□□□□□ -2.17
Ccdc39Q9D5Y1 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.47□□□□□ -2.17
Ccdc39Q9D5Y1 Gm25068-201ENSMUST00000103895 110 ntBASIC1.46□□□□□ -2.18
Ccdc39Q9D5Y1 Gm25759-201ENSMUST00000103988 129 ntBASIC1.46□□□□□ -2.18
Ccdc39Q9D5Y1 Gm22780-201ENSMUST00000104084 132 ntBASIC1.46□□□□□ -2.18
Ccdc39Q9D5Y1 Gm11204-201ENSMUST00000122438 147 ntBASIC1.46□□□□□ -2.18
Ccdc39Q9D5Y1 Gm24510-201ENSMUST00000174965 94 ntBASIC1.46□□□□□ -2.18
Ccdc39Q9D5Y1 Gm34139-201ENSMUST00000196166 294 ntBASIC1.46□□□□□ -2.18
Ccdc39Q9D5Y1 Gm23370-201ENSMUST00000199545 130 ntBASIC1.46□□□□□ -2.18
Ccdc39Q9D5Y1 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC1.46□□□□□ -2.18
Ccdc39Q9D5Y1 Gm25513-201ENSMUST00000083861 162 ntBASIC1.46□□□□□ -2.18
Ccdc39Q9D5Y1 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.46□□□□□ -2.18
Ccdc39Q9D5Y1 Mir466p-201ENSMUST00000103925 89 ntBASIC1.45□□□□□ -2.18
Ccdc39Q9D5Y1 Gm13797-201ENSMUST00000121792 120 ntBASIC1.45□□□□□ -2.18
Ccdc39Q9D5Y1 Gm22228-201ENSMUST00000157364 101 ntBASIC1.45□□□□□ -2.18
Ccdc39Q9D5Y1 Gm25423-201ENSMUST00000157609 107 ntBASIC1.45□□□□□ -2.18
Ccdc39Q9D5Y1 Gm25834-201ENSMUST00000158916 101 ntBASIC1.45□□□□□ -2.18
Ccdc39Q9D5Y1 Gm23636-201ENSMUST00000175070 95 ntBASIC1.45□□□□□ -2.18
Ccdc39Q9D5Y1 Mir6905-201ENSMUST00000184228 70 ntBASIC1.45□□□□□ -2.18
Ccdc39Q9D5Y1 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.45□□□□□ -2.18
Ccdc39Q9D5Y1 Snord14a-201ENSMUST00000082807 87 ntBASIC1.45□□□□□ -2.18
Ccdc39Q9D5Y1 Gm24453-201ENSMUST00000083346 76 ntBASIC1.45□□□□□ -2.18
Ccdc39Q9D5Y1 Gm22744-201ENSMUST00000083444 65 ntBASIC1.45□□□□□ -2.18
Ccdc39Q9D5Y1 Gm24865-201ENSMUST00000103246 96 ntBASIC1.44□□□□□ -2.18
Ccdc39Q9D5Y1 Gm24595-201ENSMUST00000122501 110 ntBASIC1.44□□□□□ -2.18
Ccdc39Q9D5Y1 Gm24668-201ENSMUST00000158935 104 ntBASIC1.44□□□□□ -2.18
Ccdc39Q9D5Y1 Gm27803-201ENSMUST00000183763 119 ntBASIC1.44□□□□□ -2.18
Ccdc39Q9D5Y1 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC1.44□□□□□ -2.18
Ccdc39Q9D5Y1 Gm2077-201ENSMUST00000195017 319 ntBASIC1.44□□□□□ -2.18
Ccdc39Q9D5Y1 Mir155-201ENSMUST00000083463 65 ntBASIC1.44□□□□□ -2.18
Ccdc39Q9D5Y1 Mir384-201ENSMUST00000083565 88 ntBASIC1.44□□□□□ -2.18
Ccdc39Q9D5Y1 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.44□□□□□ -2.18
Ccdc39Q9D5Y1 Mir293-201ENSMUST00000104841 80 ntBASIC1.43□□□□□ -2.18
Ccdc39Q9D5Y1 Gm26029-201ENSMUST00000158659 132 ntBASIC1.43□□□□□ -2.18
Ccdc39Q9D5Y1 Gm23208-201ENSMUST00000158666 127 ntBASIC1.43□□□□□ -2.18
Ccdc39Q9D5Y1 Gm23571-201ENSMUST00000180073 127 ntBASIC1.43□□□□□ -2.18
Ccdc39Q9D5Y1 Gm28344-201ENSMUST00000185704 279 ntBASIC1.43□□□□□ -2.18
Ccdc39Q9D5Y1 AC154636.2-201ENSMUST00000222538 161 ntBASIC1.43□□□□□ -2.18
Ccdc39Q9D5Y1 AC122320.1-201ENSMUST00000227233 105 ntBASIC1.43□□□□□ -2.18
Ccdc39Q9D5Y1 Gm25634-201ENSMUST00000082667 105 ntBASIC1.43□□□□□ -2.18
Ccdc39Q9D5Y1 Gm25401-201ENSMUST00000082975 106 ntBASIC1.43□□□□□ -2.18
Ccdc39Q9D5Y1 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Ccdc39Q9D5Y1 Gm26082-201ENSMUST00000104070 127 ntBASIC1.42□□□□□ -2.18
Ccdc39Q9D5Y1 Gm22944-201ENSMUST00000158662 133 ntBASIC1.42□□□□□ -2.18
Ccdc39Q9D5Y1 Gm24154-201ENSMUST00000175261 130 ntBASIC1.42□□□□□ -2.18
Ccdc39Q9D5Y1 Gm29613-201ENSMUST00000185846 313 ntBASIC1.42□□□□□ -2.18
Ccdc39Q9D5Y1 Gm29544-201ENSMUST00000188860 313 ntBASIC1.42□□□□□ -2.18
Ccdc39Q9D5Y1 Gm28808-201ENSMUST00000190978 313 ntBASIC1.42□□□□□ -2.18
Ccdc39Q9D5Y1 CT010449.1-201ENSMUST00000220624 153 ntBASIC1.42□□□□□ -2.18
Ccdc39Q9D5Y1 Gm25357-201ENSMUST00000082745 72 ntBASIC1.42□□□□□ -2.18
Ccdc39Q9D5Y1 Gm23461-201ENSMUST00000083265 107 ntBASIC1.42□□□□□ -2.18
Ccdc39Q9D5Y1 Gm23245-201ENSMUST00000083370 135 ntBASIC1.42□□□□□ -2.18
Ccdc39Q9D5Y1 Mir410-201ENSMUST00000083563 81 ntBASIC1.42□□□□□ -2.18
Ccdc39Q9D5Y1 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Ccdc39Q9D5Y1 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.41□□□□□ -2.18
Ccdc39Q9D5Y1 Gm22663-201ENSMUST00000158721 102 ntBASIC1.41□□□□□ -2.18
Ccdc39Q9D5Y1 Gm5010-201ENSMUST00000213131 260 ntBASIC1.41□□□□□ -2.18
Ccdc39Q9D5Y1 Gm24252-201ENSMUST00000083700 132 ntBASIC1.41□□□□□ -2.18
Ccdc39Q9D5Y1 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
Ccdc39Q9D5Y1 Snord72-201ENSMUST00000104549 81 ntBASIC1.4□□□□□ -2.19
Ccdc39Q9D5Y1 Gm13560-201ENSMUST00000121865 329 ntBASIC1.4□□□□□ -2.19
Ccdc39Q9D5Y1 Traj60-201ENSMUST00000167781 54 ntBASIC1.4□□□□□ -2.19
Ccdc39Q9D5Y1 Gm27894-201ENSMUST00000184177 92 ntBASIC1.4□□□□□ -2.19
Ccdc39Q9D5Y1 Mir7059-201ENSMUST00000184825 59 ntBASIC1.4□□□□□ -2.19
Ccdc39Q9D5Y1 Gm29014-201ENSMUST00000191422 326 ntBASIC1.4□□□□□ -2.19
Ccdc39Q9D5Y1 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC1.4□□□□□ -2.19
Ccdc39Q9D5Y1 Gm26339-201ENSMUST00000102368 99 ntBASIC1.39□□□□□ -2.19
Ccdc39Q9D5Y1 Gm16032-201ENSMUST00000118534 168 ntBASIC1.39□□□□□ -2.19
Ccdc39Q9D5Y1 Gm13801-201ENSMUST00000120750 160 ntBASIC1.39□□□□□ -2.19
Ccdc39Q9D5Y1 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC1.39□□□□□ -2.19
Ccdc39Q9D5Y1 Gm22553-201ENSMUST00000157797 295 ntBASIC1.39□□□□□ -2.19
Ccdc39Q9D5Y1 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
Ccdc39Q9D5Y1 Mir3968-201ENSMUST00000175355 100 ntBASIC1.39□□□□□ -2.19
Ccdc39Q9D5Y1 Gm24366-201ENSMUST00000175383 86 ntBASIC1.39□□□□□ -2.19
Ccdc39Q9D5Y1 Gm6003-201ENSMUST00000187903 463 ntBASIC1.39□□□□□ -2.19
Ccdc39Q9D5Y1 Gm29308-201ENSMUST00000188863 315 ntBASIC1.39□□□□□ -2.19
Ccdc39Q9D5Y1 Gm28537-201ENSMUST00000189026 315 ntBASIC1.39□□□□□ -2.19
Ccdc39Q9D5Y1 Gm29631-201ENSMUST00000191065 315 ntBASIC1.39□□□□□ -2.19
Ccdc39Q9D5Y1 Gm37693-201ENSMUST00000194562 234 ntBASIC1.39□□□□□ -2.19
Ccdc39Q9D5Y1 Gm26204-201ENSMUST00000082906 107 ntBASIC1.39□□□□□ -2.19
Ccdc39Q9D5Y1 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms