Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 AC159625.1-201ENSMUST00000220994 2625 ntBASIC1.87□□□□□ -2.11
Ddx56Q9D0R4 Gm25565-201ENSMUST00000104605 105 ntBASIC1.86□□□□□ -2.11
Ddx56Q9D0R4 Gm11856-201ENSMUST00000118712 276 ntBASIC1.86□□□□□ -2.11
Ddx56Q9D0R4 Gm22164-201ENSMUST00000158413 106 ntBASIC1.86□□□□□ -2.11
Ddx56Q9D0R4 Gm22259-201ENSMUST00000178926 107 ntBASIC1.86□□□□□ -2.11
Ddx56Q9D0R4 Gm44921-201ENSMUST00000205290 301 ntBASIC1.86□□□□□ -2.11
Ddx56Q9D0R4 Gm27047-201ENSMUST00000183072 1819 ntBASIC1.86□□□□□ -2.11
Ddx56Q9D0R4 BC022960-201ENSMUST00000119987 1815 ntBASIC1.85□□□□□ -2.11
Ddx56Q9D0R4 Gm23277-201ENSMUST00000157914 136 ntBASIC1.85□□□□□ -2.11
Ddx56Q9D0R4 Gm24000-201ENSMUST00000158063 89 ntBASIC1.85□□□□□ -2.11
Ddx56Q9D0R4 Gm26213-201ENSMUST00000158582 110 ntBASIC1.85□□□□□ -2.11
Ddx56Q9D0R4 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.85□□□□□ -2.11
Ddx56Q9D0R4 Mir6350-201ENSMUST00000183639 105 ntBASIC1.85□□□□□ -2.11
Ddx56Q9D0R4 Gm27694-201ENSMUST00000184740 86 ntBASIC1.85□□□□□ -2.11
Ddx56Q9D0R4 Mir1a-2-201ENSMUST00000198520 72 ntBASIC1.85□□□□□ -2.11
Ddx56Q9D0R4 Gm24762-201ENSMUST00000083689 104 ntBASIC1.85□□□□□ -2.11
Ddx56Q9D0R4 Gm43877-201ENSMUST00000205029 2238 ntBASIC1.85□□□□□ -2.11
Ddx56Q9D0R4 Gm22477-201ENSMUST00000122569 316 ntBASIC1.84□□□□□ -2.11
Ddx56Q9D0R4 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Ddx56Q9D0R4 Gm24915-201ENSMUST00000157288 78 ntBASIC1.84□□□□□ -2.11
Ddx56Q9D0R4 Gm22387-201ENSMUST00000158191 131 ntBASIC1.84□□□□□ -2.11
Ddx56Q9D0R4 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Ddx56Q9D0R4 Mir7226-201ENSMUST00000184953 60 ntBASIC1.84□□□□□ -2.11
Ddx56Q9D0R4 Gm42855-201ENSMUST00000197388 253 ntBASIC1.84□□□□□ -2.11
Ddx56Q9D0R4 CT033781.2-201ENSMUST00000221113 153 ntBASIC1.84□□□□□ -2.11
Ddx56Q9D0R4 Gm25943-201ENSMUST00000103791 90 ntBASIC1.83□□□□□ -2.12
Ddx56Q9D0R4 Mir466b-7-201ENSMUST00000103804 88 ntBASIC1.83□□□□□ -2.12
Ddx56Q9D0R4 Mir466b-5-201ENSMUST00000103900 88 ntBASIC1.83□□□□□ -2.12
Ddx56Q9D0R4 Gm25878-201ENSMUST00000104327 93 ntBASIC1.83□□□□□ -2.12
Ddx56Q9D0R4 Mir669d-201ENSMUST00000104644 121 ntBASIC1.83□□□□□ -2.12
Ddx56Q9D0R4 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Ddx56Q9D0R4 Gm6952-201ENSMUST00000118629 159 ntBASIC1.83□□□□□ -2.12
Ddx56Q9D0R4 Gm14671-201ENSMUST00000121790 262 ntBASIC1.83□□□□□ -2.12
Ddx56Q9D0R4 Mir466b-4-201ENSMUST00000178801 90 ntBASIC1.83□□□□□ -2.12
Ddx56Q9D0R4 Gm25285-201ENSMUST00000178951 90 ntBASIC1.83□□□□□ -2.12
Ddx56Q9D0R4 Mir466b-6-201ENSMUST00000180061 90 ntBASIC1.83□□□□□ -2.12
Ddx56Q9D0R4 Mir466c-2-201ENSMUST00000180211 90 ntBASIC1.83□□□□□ -2.12
Ddx56Q9D0R4 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC1.83□□□□□ -2.12
Ddx56Q9D0R4 Gm46993-201ENSMUST00000220708 259 ntBASIC1.83□□□□□ -2.12
Ddx56Q9D0R4 Gm23109-201ENSMUST00000116867 126 ntBASIC1.82□□□□□ -2.12
Ddx56Q9D0R4 Gm22163-201ENSMUST00000158408 135 ntBASIC1.82□□□□□ -2.12
Ddx56Q9D0R4 Gm24415-201ENSMUST00000180218 107 ntBASIC1.82□□□□□ -2.12
Ddx56Q9D0R4 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.82□□□□□ -2.12
Ddx56Q9D0R4 Gm45544-201ENSMUST00000211130 88 ntBASIC1.82□□□□□ -2.12
Ddx56Q9D0R4 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.82□□□□□ -2.12
Ddx56Q9D0R4 AC133517.1-203ENSMUST00000225570 390 ntBASIC1.82□□□□□ -2.12
Ddx56Q9D0R4 Gm24165-201ENSMUST00000082718 128 ntBASIC1.82□□□□□ -2.12
Ddx56Q9D0R4 Mir218-1-201ENSMUST00000083669 110 ntBASIC1.82□□□□□ -2.12
Ddx56Q9D0R4 Gm26293-201ENSMUST00000104170 84 ntBASIC1.81□□□□□ -2.12
Ddx56Q9D0R4 Gm26160-201ENSMUST00000158965 63 ntBASIC1.81□□□□□ -2.12
Ddx56Q9D0R4 Gm27465-201ENSMUST00000184290 91 ntBASIC1.81□□□□□ -2.12
Ddx56Q9D0R4 Gm38364-201ENSMUST00000191814 179 ntBASIC1.81□□□□□ -2.12
Ddx56Q9D0R4 Gm37746-201ENSMUST00000193249 198 ntBASIC1.81□□□□□ -2.12
Ddx56Q9D0R4 Mir7116-201ENSMUST00000195956 70 ntBASIC1.81□□□□□ -2.12
Ddx56Q9D0R4 Gm43427-201ENSMUST00000198188 331 ntBASIC1.81□□□□□ -2.12
Ddx56Q9D0R4 Gm22704-201ENSMUST00000083027 137 ntBASIC1.81□□□□□ -2.12
Ddx56Q9D0R4 Gm24494-201ENSMUST00000083804 81 ntBASIC1.81□□□□□ -2.12
Ddx56Q9D0R4 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Ddx56Q9D0R4 Gm22785-201ENSMUST00000104087 132 ntBASIC1.8□□□□□ -2.12
Ddx56Q9D0R4 Gm14923-201ENSMUST00000118270 155 ntBASIC1.8□□□□□ -2.12
Ddx56Q9D0R4 Gm3788-201ENSMUST00000119949 136 ntBASIC1.8□□□□□ -2.12
Ddx56Q9D0R4 Mir669n-201ENSMUST00000158636 54 ntBASIC1.8□□□□□ -2.12
Ddx56Q9D0R4 Gm25464-201ENSMUST00000175481 107 ntBASIC1.8□□□□□ -2.12
Ddx56Q9D0R4 Gm22621-201ENSMUST00000179678 74 ntBASIC1.8□□□□□ -2.12
Ddx56Q9D0R4 Mir7679-201ENSMUST00000183379 63 ntBASIC1.8□□□□□ -2.12
Ddx56Q9D0R4 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.8□□□□□ -2.12
Ddx56Q9D0R4 CT010449.1-201ENSMUST00000220624 153 ntBASIC1.8□□□□□ -2.12
Ddx56Q9D0R4 AC154282.1-201ENSMUST00000223154 265 ntBASIC1.8□□□□□ -2.12
Ddx56Q9D0R4 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Ddx56Q9D0R4 Gm13922-201ENSMUST00000119505 156 ntBASIC1.79□□□□□ -2.12
Ddx56Q9D0R4 Gm25279-201ENSMUST00000122608 133 ntBASIC1.79□□□□□ -2.12
Ddx56Q9D0R4 Gm24015-201ENSMUST00000157725 232 ntBASIC1.79□□□□□ -2.12
Ddx56Q9D0R4 Gm19790-201ENSMUST00000214414 251 ntBASIC1.79□□□□□ -2.12
Ddx56Q9D0R4 Gm16976-205ENSMUST00000227324 226 ntBASIC1.79□□□□□ -2.12
Ddx56Q9D0R4 Snord96a-201ENSMUST00000082791 81 ntBASIC1.79□□□□□ -2.12
Ddx56Q9D0R4 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.79□□□□□ -2.12
Ddx56Q9D0R4 Mir758-201ENSMUST00000103260 81 ntBASIC1.78□□□□□ -2.12
Ddx56Q9D0R4 Gm25759-201ENSMUST00000103988 129 ntBASIC1.78□□□□□ -2.12
Ddx56Q9D0R4 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.78□□□□□ -2.12
Ddx56Q9D0R4 Gm27672-201ENSMUST00000183751 204 ntBASIC1.78□□□□□ -2.12
Ddx56Q9D0R4 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.78□□□□□ -2.12
Ddx56Q9D0R4 Gm23299-201ENSMUST00000082708 79 ntBASIC1.78□□□□□ -2.12
Ddx56Q9D0R4 Gm23950-201ENSMUST00000104026 129 ntBASIC1.77□□□□□ -2.13
Ddx56Q9D0R4 Mir302d-201ENSMUST00000083513 66 ntBASIC1.77□□□□□ -2.13
Ddx56Q9D0R4 Mir471-201ENSMUST00000093596 67 ntBASIC1.77□□□□□ -2.13
Ddx56Q9D0R4 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Ddx56Q9D0R4 Gm14775-201ENSMUST00000122089 310 ntBASIC1.76□□□□□ -2.13
Ddx56Q9D0R4 Gm22803-201ENSMUST00000158049 283 ntBASIC1.76□□□□□ -2.13
Ddx56Q9D0R4 Gm24345-201ENSMUST00000158706 124 ntBASIC1.76□□□□□ -2.13
Ddx56Q9D0R4 Gm27803-201ENSMUST00000183763 119 ntBASIC1.76□□□□□ -2.13
Ddx56Q9D0R4 Mir6352-201ENSMUST00000184495 116 ntBASIC1.76□□□□□ -2.13
Ddx56Q9D0R4 Gm29603-201ENSMUST00000186792 334 ntBASIC1.76□□□□□ -2.13
Ddx56Q9D0R4 Gm29262-201ENSMUST00000190084 196 ntBASIC1.76□□□□□ -2.13
Ddx56Q9D0R4 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.76□□□□□ -2.13
Ddx56Q9D0R4 Gm25855-201ENSMUST00000082787 72 ntBASIC1.76□□□□□ -2.13
Ddx56Q9D0R4 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.75□□□□□ -2.13
Ddx56Q9D0R4 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC1.75□□□□□ -2.13
Ddx56Q9D0R4 Gm11792-201ENSMUST00000120640 168 ntBASIC1.75□□□□□ -2.13
Ddx56Q9D0R4 Gm25828-201ENSMUST00000157087 95 ntBASIC1.75□□□□□ -2.13
Ddx56Q9D0R4 Mir721-201ENSMUST00000200230 88 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 160.3 ms