Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm26479-201ENSMUST00000122620 106 ntBASIC0.82□□□□□ -2.28
Ccdc43Q9CR29 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.82□□□□□ -2.28
Ccdc43Q9CR29 Gm22080-201ENSMUST00000157591 106 ntBASIC0.82□□□□□ -2.28
Ccdc43Q9CR29 Gm28418-201ENSMUST00000186179 423 ntBASIC0.82□□□□□ -2.28
Ccdc43Q9CR29 Gm28256-201ENSMUST00000188953 139 ntBASIC0.82□□□□□ -2.28
Ccdc43Q9CR29 Gm28559-201ENSMUST00000190532 139 ntBASIC0.82□□□□□ -2.28
Ccdc43Q9CR29 Gm42988-201ENSMUST00000198116 225 ntBASIC0.82□□□□□ -2.28
Ccdc43Q9CR29 Gm24453-201ENSMUST00000083346 76 ntBASIC0.82□□□□□ -2.28
Ccdc43Q9CR29 Gm24579-201ENSMUST00000103964 144 ntBASIC0.81□□□□□ -2.28
Ccdc43Q9CR29 Gm25506-201ENSMUST00000104339 70 ntBASIC0.81□□□□□ -2.28
Ccdc43Q9CR29 Gm20386-201ENSMUST00000174010 132 ntBASIC0.81□□□□□ -2.28
Ccdc43Q9CR29 Gm25615-201ENSMUST00000177836 94 ntBASIC0.81□□□□□ -2.28
Ccdc43Q9CR29 Gm28669-201ENSMUST00000188400 100 ntBASIC0.81□□□□□ -2.28
Ccdc43Q9CR29 Gm44057-201ENSMUST00000204547 96 ntBASIC0.81□□□□□ -2.28
Ccdc43Q9CR29 Gm44858-201ENSMUST00000207360 154 ntBASIC0.81□□□□□ -2.28
Ccdc43Q9CR29 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC0.81□□□□□ -2.28
Ccdc43Q9CR29 Mir410-201ENSMUST00000083563 81 ntBASIC0.81□□□□□ -2.28
Ccdc43Q9CR29 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC0.8□□□□□ -2.28
Ccdc43Q9CR29 Gm23584-201ENSMUST00000157655 129 ntBASIC0.8□□□□□ -2.28
Ccdc43Q9CR29 Gm24747-201ENSMUST00000157835 87 ntBASIC0.8□□□□□ -2.28
Ccdc43Q9CR29 Snora24-201ENSMUST00000174989 130 ntBASIC0.8□□□□□ -2.28
Ccdc43Q9CR29 Gm38113-201ENSMUST00000193704 201 ntBASIC0.8□□□□□ -2.28
Ccdc43Q9CR29 Gm44948-201ENSMUST00000209050 149 ntBASIC0.8□□□□□ -2.28
Ccdc43Q9CR29 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.8□□□□□ -2.28
Ccdc43Q9CR29 Gm22283-201ENSMUST00000082556 161 ntBASIC0.8□□□□□ -2.28
Ccdc43Q9CR29 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
Ccdc43Q9CR29 Mir759-201ENSMUST00000103254 98 ntBASIC0.79□□□□□ -2.28
Ccdc43Q9CR29 Gm23203-201ENSMUST00000104374 107 ntBASIC0.79□□□□□ -2.28
Ccdc43Q9CR29 Gm22984-201ENSMUST00000122751 122 ntBASIC0.79□□□□□ -2.28
Ccdc43Q9CR29 Gm22097-201ENSMUST00000157929 278 ntBASIC0.79□□□□□ -2.28
Ccdc43Q9CR29 Gm22118-201ENSMUST00000175593 171 ntBASIC0.79□□□□□ -2.28
Ccdc43Q9CR29 Mir6364-201ENSMUST00000183396 86 ntBASIC0.79□□□□□ -2.28
Ccdc43Q9CR29 Gm43563-201ENSMUST00000196761 198 ntBASIC0.79□□□□□ -2.28
Ccdc43Q9CR29 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC0.79□□□□□ -2.28
Ccdc43Q9CR29 Gm45005-201ENSMUST00000206640 157 ntBASIC0.79□□□□□ -2.28
Ccdc43Q9CR29 Snord33-201ENSMUST00000083694 84 ntBASIC0.79□□□□□ -2.28
Ccdc43Q9CR29 Gm24880-201ENSMUST00000158776 85 ntBASIC0.78□□□□□ -2.28
Ccdc43Q9CR29 Mir3079-201ENSMUST00000175428 90 ntBASIC0.78□□□□□ -2.28
Ccdc43Q9CR29 Gm37845-201ENSMUST00000194977 355 ntBASIC0.78□□□□□ -2.28
Ccdc43Q9CR29 CT010454.1-201ENSMUST00000225975 265 ntBASIC0.78□□□□□ -2.28
Ccdc43Q9CR29 Snora19-201ENSMUST00000082962 132 ntBASIC0.78□□□□□ -2.28
Ccdc43Q9CR29 Gm23658-201ENSMUST00000083233 132 ntBASIC0.78□□□□□ -2.28
Ccdc43Q9CR29 Gm24345-201ENSMUST00000158706 124 ntBASIC0.77□□□□□ -2.29
Ccdc43Q9CR29 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
Ccdc43Q9CR29 AC159896.1-201ENSMUST00000215264 215 ntBASIC0.77□□□□□ -2.29
Ccdc43Q9CR29 Gm25538-201ENSMUST00000101943 107 ntBASIC0.76□□□□□ -2.29
Ccdc43Q9CR29 Gm13801-201ENSMUST00000120750 160 ntBASIC0.76□□□□□ -2.29
Ccdc43Q9CR29 Gm14919-201ENSMUST00000120839 390 ntBASIC0.76□□□□□ -2.29
Ccdc43Q9CR29 Gm15213-201ENSMUST00000122098 216 ntBASIC0.76□□□□□ -2.29
Ccdc43Q9CR29 Gm24678-201ENSMUST00000158756 104 ntBASIC0.76□□□□□ -2.29
Ccdc43Q9CR29 Gm23024-201ENSMUST00000158770 292 ntBASIC0.76□□□□□ -2.29
Ccdc43Q9CR29 Gm26159-201ENSMUST00000158968 104 ntBASIC0.76□□□□□ -2.29
Ccdc43Q9CR29 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
Ccdc43Q9CR29 Gm44052-201ENSMUST00000203382 396 ntBASIC0.76□□□□□ -2.29
Ccdc43Q9CR29 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
Ccdc43Q9CR29 Gm26073-201ENSMUST00000179906 127 ntBASIC0.74□□□□□ -2.29
Ccdc43Q9CR29 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC0.74□□□□□ -2.29
Ccdc43Q9CR29 Gm28435-201ENSMUST00000185496 108 ntBASIC0.74□□□□□ -2.29
Ccdc43Q9CR29 Gm38183-201ENSMUST00000193189 205 ntBASIC0.74□□□□□ -2.29
Ccdc43Q9CR29 AC129085.1-201ENSMUST00000225263 165 ntBASIC0.74□□□□□ -2.29
Ccdc43Q9CR29 Mir101a-201ENSMUST00000083517 83 ntBASIC0.74□□□□□ -2.29
Ccdc43Q9CR29 Gm25875-201ENSMUST00000104323 107 ntBASIC0.73□□□□□ -2.29
Ccdc43Q9CR29 Gm25968-201ENSMUST00000157167 100 ntBASIC0.73□□□□□ -2.29
Ccdc43Q9CR29 Gm16539-201ENSMUST00000160086 327 ntBASIC0.73□□□□□ -2.29
Ccdc43Q9CR29 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
Ccdc43Q9CR29 Gm27656-201ENSMUST00000185055 80 ntBASIC0.73□□□□□ -2.29
Ccdc43Q9CR29 Gm36956-201ENSMUST00000193830 214 ntBASIC0.73□□□□□ -2.29
Ccdc43Q9CR29 Gm45544-201ENSMUST00000211130 88 ntBASIC0.73□□□□□ -2.29
Ccdc43Q9CR29 Gm45471-201ENSMUST00000211270 281 ntBASIC0.73□□□□□ -2.29
Ccdc43Q9CR29 Gm23941-201ENSMUST00000101953 107 ntBASIC0.72□□□□□ -2.29
Ccdc43Q9CR29 Gm22796-201ENSMUST00000157234 106 ntBASIC0.72□□□□□ -2.29
Ccdc43Q9CR29 Gm22553-201ENSMUST00000157797 295 ntBASIC0.72□□□□□ -2.29
Ccdc43Q9CR29 Mir3109-201ENSMUST00000175301 88 ntBASIC0.72□□□□□ -2.29
Ccdc43Q9CR29 Gm22448-201ENSMUST00000179254 107 ntBASIC0.72□□□□□ -2.29
Ccdc43Q9CR29 Mir709-201ENSMUST00000102190 88 ntBASIC0.71□□□□□ -2.3
Ccdc43Q9CR29 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
Ccdc43Q9CR29 Gm25378-201ENSMUST00000104333 129 ntBASIC0.71□□□□□ -2.3
Ccdc43Q9CR29 Mir7227-201ENSMUST00000200408 59 ntBASIC0.71□□□□□ -2.3
Ccdc43Q9CR29 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.71□□□□□ -2.3
Ccdc43Q9CR29 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.71□□□□□ -2.3
Ccdc43Q9CR29 Gm26497-201ENSMUST00000083146 107 ntBASIC0.71□□□□□ -2.3
Ccdc43Q9CR29 Mir451a-201ENSMUST00000093557 72 ntBASIC0.71□□□□□ -2.3
Ccdc43Q9CR29 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
Ccdc43Q9CR29 Gm38060-201ENSMUST00000194822 464 ntBASIC0.7□□□□□ -2.3
Ccdc43Q9CR29 Gm42594-201ENSMUST00000199511 246 ntBASIC0.7□□□□□ -2.3
Ccdc43Q9CR29 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
Ccdc43Q9CR29 Gm10730-201ENSMUST00000194097 2723 ntBASIC0.7□□□□□ -2.3
Ccdc43Q9CR29 AC160984.1-201ENSMUST00000225855 3154 ntBASIC0.69□□□□□ -2.3
Ccdc43Q9CR29 Snord89-201ENSMUST00000104516 110 ntBASIC0.69□□□□□ -2.3
Ccdc43Q9CR29 Gm11420-201ENSMUST00000120047 402 ntBASIC0.69□□□□□ -2.3
Ccdc43Q9CR29 Gm14671-201ENSMUST00000121790 262 ntBASIC0.69□□□□□ -2.3
Ccdc43Q9CR29 Gm22450-201ENSMUST00000179641 107 ntBASIC0.69□□□□□ -2.3
Ccdc43Q9CR29 Gm25473-201ENSMUST00000180191 107 ntBASIC0.69□□□□□ -2.3
Ccdc43Q9CR29 Gm43505-201ENSMUST00000200579 139 ntBASIC0.69□□□□□ -2.3
Ccdc43Q9CR29 Gm24856-201ENSMUST00000082809 107 ntBASIC0.69□□□□□ -2.3
Ccdc43Q9CR29 Gm26071-201ENSMUST00000083261 107 ntBASIC0.69□□□□□ -2.3
Ccdc43Q9CR29 Gm24521-201ENSMUST00000083958 107 ntBASIC0.69□□□□□ -2.3
Ccdc43Q9CR29 Gm26415-201ENSMUST00000157673 292 ntBASIC0.68□□□□□ -2.3
Ccdc43Q9CR29 Gm45616-201ENSMUST00000211711 319 ntBASIC0.68□□□□□ -2.3
Ccdc43Q9CR29 Snora20-201ENSMUST00000082703 128 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 173 ms