Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Mir7081-201ENSMUST00000184490 75 ntBASIC3.05□□□□□ -1.92
Trim11Q99PQ2 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC3.05□□□□□ -1.92
Trim11Q99PQ2 Gm22283-201ENSMUST00000082556 161 ntBASIC3.05□□□□□ -1.92
Trim11Q99PQ2 Gm24203-201ENSMUST00000082949 114 ntBASIC3.05□□□□□ -1.92
Trim11Q99PQ2 Gm25199-201ENSMUST00000083095 104 ntBASIC3.05□□□□□ -1.92
Trim11Q99PQ2 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
Trim11Q99PQ2 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Trim11Q99PQ2 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Trim11Q99PQ2 Gm22319-201ENSMUST00000157147 122 ntBASIC3.04□□□□□ -1.92
Trim11Q99PQ2 Gm26105-201ENSMUST00000157253 190 ntBASIC3.04□□□□□ -1.92
Trim11Q99PQ2 Gm24573-201ENSMUST00000175499 112 ntBASIC3.04□□□□□ -1.92
Trim11Q99PQ2 Gm44482-201ENSMUST00000199232 103 ntBASIC3.04□□□□□ -1.92
Trim11Q99PQ2 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC3.04□□□□□ -1.92
Trim11Q99PQ2 AC130477.2-201ENSMUST00000228158 274 ntBASIC3.04□□□□□ -1.92
Trim11Q99PQ2 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trim11Q99PQ2 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
Trim11Q99PQ2 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Trim11Q99PQ2 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Trim11Q99PQ2 Gm24403-201ENSMUST00000104616 130 ntBASIC3.03□□□□□ -1.92
Trim11Q99PQ2 Gm25539-201ENSMUST00000116886 122 ntBASIC3.03□□□□□ -1.92
Trim11Q99PQ2 Gm22963-201ENSMUST00000157960 91 ntBASIC3.03□□□□□ -1.92
Trim11Q99PQ2 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
Trim11Q99PQ2 Mir6377-201ENSMUST00000183760 114 ntBASIC3.03□□□□□ -1.92
Trim11Q99PQ2 Gm37807-201ENSMUST00000194310 190 ntBASIC3.03□□□□□ -1.92
Trim11Q99PQ2 Mir9-1-201ENSMUST00000199907 89 ntBASIC3.03□□□□□ -1.92
Trim11Q99PQ2 Gm30534-201ENSMUST00000217928 207 ntBASIC3.03□□□□□ -1.92
Trim11Q99PQ2 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.03□□□□□ -1.92
Trim11Q99PQ2 Gm23246-201ENSMUST00000083371 67 ntBASIC3.03□□□□□ -1.92
Trim11Q99PQ2 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Trim11Q99PQ2 Gm37331-201ENSMUST00000192367 3375 ntBASIC3.03□□□□□ -1.92
Trim11Q99PQ2 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Trim11Q99PQ2 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Trim11Q99PQ2 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Trim11Q99PQ2 Gm24291-201ENSMUST00000157633 162 ntBASIC3.02□□□□□ -1.93
Trim11Q99PQ2 Gm28669-201ENSMUST00000188400 100 ntBASIC3.02□□□□□ -1.93
Trim11Q99PQ2 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Trim11Q99PQ2 Gm37566-201ENSMUST00000192363 4355 ntBASIC3.01□□□□□ -1.93
Trim11Q99PQ2 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
Trim11Q99PQ2 Gm11792-201ENSMUST00000120640 168 ntBASIC3.01□□□□□ -1.93
Trim11Q99PQ2 Gm23268-201ENSMUST00000175494 78 ntBASIC3.01□□□□□ -1.93
Trim11Q99PQ2 Gm9156-201ENSMUST00000189660 463 ntBASIC3.01□□□□□ -1.93
Trim11Q99PQ2 Gm34314-201ENSMUST00000203622 367 ntBASIC3.01□□□□□ -1.93
Trim11Q99PQ2 AC166341.8-201ENSMUST00000221267 108 ntBASIC3.01□□□□□ -1.93
Trim11Q99PQ2 Hmgb1l-201ENSMUST00000082150 571 ntBASIC3.01□□□□□ -1.93
Trim11Q99PQ2 Gm26326-201ENSMUST00000083070 129 ntBASIC3.01□□□□□ -1.93
Trim11Q99PQ2 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Trim11Q99PQ2 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Trim11Q99PQ2 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Trim11Q99PQ2 Gm16355-201ENSMUST00000128606 231 ntBASIC3□□□□□ -1.93
Trim11Q99PQ2 Gm23381-201ENSMUST00000157676 94 ntBASIC3□□□□□ -1.93
Trim11Q99PQ2 Mir7658-201ENSMUST00000184043 57 ntBASIC3□□□□□ -1.93
Trim11Q99PQ2 AC098718.1-201ENSMUST00000226166 175 ntBASIC3□□□□□ -1.93
Trim11Q99PQ2 Snora41-201ENSMUST00000082668 132 ntBASIC3□□□□□ -1.93
Trim11Q99PQ2 Gm24524-201ENSMUST00000082925 170 ntBASIC3□□□□□ -1.93
Trim11Q99PQ2 Gm23237-201ENSMUST00000104639 92 ntBASIC2.99□□□□□ -1.93
Trim11Q99PQ2 Gm25490-201ENSMUST00000158734 130 ntBASIC2.99□□□□□ -1.93
Trim11Q99PQ2 Gm23369-201ENSMUST00000175406 105 ntBASIC2.99□□□□□ -1.93
Trim11Q99PQ2 Mir7578-201ENSMUST00000183455 82 ntBASIC2.99□□□□□ -1.93
Trim11Q99PQ2 Mir6928-201ENSMUST00000185166 70 ntBASIC2.99□□□□□ -1.93
Trim11Q99PQ2 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Trim11Q99PQ2 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Trim11Q99PQ2 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
Trim11Q99PQ2 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Trim11Q99PQ2 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Trim11Q99PQ2 Mir542-201ENSMUST00000102186 85 ntBASIC2.98□□□□□ -1.93
Trim11Q99PQ2 Gm13862-201ENSMUST00000121220 197 ntBASIC2.98□□□□□ -1.93
Trim11Q99PQ2 Gm26411-201ENSMUST00000157668 107 ntBASIC2.98□□□□□ -1.93
Trim11Q99PQ2 Gm23384-201ENSMUST00000158593 103 ntBASIC2.98□□□□□ -1.93
Trim11Q99PQ2 Gm23190-201ENSMUST00000180307 64 ntBASIC2.98□□□□□ -1.93
Trim11Q99PQ2 Gm44903-201ENSMUST00000206840 130 ntBASIC2.98□□□□□ -1.93
Trim11Q99PQ2 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Trim11Q99PQ2 Gm23128-201ENSMUST00000104257 132 ntBASIC2.97□□□□□ -1.93
Trim11Q99PQ2 Gm26341-201ENSMUST00000104561 134 ntBASIC2.97□□□□□ -1.93
Trim11Q99PQ2 Gm24593-201ENSMUST00000122507 106 ntBASIC2.97□□□□□ -1.93
Trim11Q99PQ2 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC2.97□□□□□ -1.93
Trim11Q99PQ2 Trbv7-201ENSMUST00000193339 402 ntBASIC2.97□□□□□ -1.93
Trim11Q99PQ2 Gm23128-202ENSMUST00000196578 133 ntBASIC2.97□□□□□ -1.93
Trim11Q99PQ2 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC2.97□□□□□ -1.93
Trim11Q99PQ2 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC2.97□□□□□ -1.93
Trim11Q99PQ2 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Trim11Q99PQ2 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Trim11Q99PQ2 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.96□□□□□ -1.94
Trim11Q99PQ2 Gm25748-201ENSMUST00000175487 70 ntBASIC2.96□□□□□ -1.94
Trim11Q99PQ2 Gm25528-201ENSMUST00000180264 132 ntBASIC2.96□□□□□ -1.94
Trim11Q99PQ2 Mir128-1-201ENSMUST00000083586 70 ntBASIC2.96□□□□□ -1.94
Trim11Q99PQ2 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Trim11Q99PQ2 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC2.96□□□□□ -1.94
Trim11Q99PQ2 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Trim11Q99PQ2 Gm25090-201ENSMUST00000104000 132 ntBASIC2.95□□□□□ -1.94
Trim11Q99PQ2 Gm22497-201ENSMUST00000104499 131 ntBASIC2.95□□□□□ -1.94
Trim11Q99PQ2 Gm14937-201ENSMUST00000119709 208 ntBASIC2.95□□□□□ -1.94
Trim11Q99PQ2 Gm14671-201ENSMUST00000121790 262 ntBASIC2.95□□□□□ -1.94
Trim11Q99PQ2 Gm24649-201ENSMUST00000157106 134 ntBASIC2.95□□□□□ -1.94
Trim11Q99PQ2 Gm24250-201ENSMUST00000157320 135 ntBASIC2.95□□□□□ -1.94
Trim11Q99PQ2 Gm25558-201ENSMUST00000158083 106 ntBASIC2.95□□□□□ -1.94
Trim11Q99PQ2 Gm23770-201ENSMUST00000178009 108 ntBASIC2.95□□□□□ -1.94
Trim11Q99PQ2 Gm22832-201ENSMUST00000178022 108 ntBASIC2.95□□□□□ -1.94
Trim11Q99PQ2 Gm23863-201ENSMUST00000178265 108 ntBASIC2.95□□□□□ -1.94
Trim11Q99PQ2 Gm24828-201ENSMUST00000178507 108 ntBASIC2.95□□□□□ -1.94
Trim11Q99PQ2 Gm23052-201ENSMUST00000178633 108 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms