Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm25771-201ENSMUST00000158565 144 ntBASIC2.15□□□□□ -2.07
Clrn1Q8K445 Mir6388-201ENSMUST00000184417 75 ntBASIC2.15□□□□□ -2.07
Clrn1Q8K445 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.15□□□□□ -2.07
Clrn1Q8K445 AC129202.1-201ENSMUST00000224895 526 ntBASIC2.15□□□□□ -2.07
Clrn1Q8K445 Gm25815-201ENSMUST00000082755 107 ntBASIC2.15□□□□□ -2.07
Clrn1Q8K445 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.15□□□□□ -2.07
Clrn1Q8K445 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.15□□□□□ -2.07
Clrn1Q8K445 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Clrn1Q8K445 Gm25878-201ENSMUST00000104327 93 ntBASIC2.14□□□□□ -2.07
Clrn1Q8K445 Gm26015-201ENSMUST00000104402 125 ntBASIC2.14□□□□□ -2.07
Clrn1Q8K445 Gm44489-201ENSMUST00000104619 97 ntBASIC2.14□□□□□ -2.07
Clrn1Q8K445 Gm24274-201ENSMUST00000116787 124 ntBASIC2.14□□□□□ -2.07
Clrn1Q8K445 Gm24937-201ENSMUST00000122597 134 ntBASIC2.14□□□□□ -2.07
Clrn1Q8K445 Gm25910-201ENSMUST00000157620 140 ntBASIC2.14□□□□□ -2.07
Clrn1Q8K445 Trav5d-3-201ENSMUST00000170041 270 ntBASIC2.14□□□□□ -2.07
Clrn1Q8K445 mt-Tt-201ENSMUST00000082422 67 ntBASIC2.14□□□□□ -2.07
Clrn1Q8K445 Gm24313-201ENSMUST00000082561 133 ntBASIC2.14□□□□□ -2.07
Clrn1Q8K445 Mir127-201ENSMUST00000093568 70 ntBASIC2.14□□□□□ -2.07
Clrn1Q8K445 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Clrn1Q8K445 Gm14937-201ENSMUST00000119709 208 ntBASIC2.13□□□□□ -2.07
Clrn1Q8K445 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Clrn1Q8K445 Gm26280-201ENSMUST00000157096 101 ntBASIC2.13□□□□□ -2.07
Clrn1Q8K445 Gm25364-201ENSMUST00000158851 107 ntBASIC2.13□□□□□ -2.07
Clrn1Q8K445 Gm20477-201ENSMUST00000174028 280 ntBASIC2.13□□□□□ -2.07
Clrn1Q8K445 Gm37796-201ENSMUST00000195327 134 ntBASIC2.13□□□□□ -2.07
Clrn1Q8K445 Mir7657-201ENSMUST00000196051 57 ntBASIC2.13□□□□□ -2.07
Clrn1Q8K445 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.13□□□□□ -2.07
Clrn1Q8K445 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.13□□□□□ -2.07
Clrn1Q8K445 Gm8508-201ENSMUST00000061226 363 ntBASIC2.13□□□□□ -2.07
Clrn1Q8K445 Gm26456-201ENSMUST00000082831 111 ntBASIC2.13□□□□□ -2.07
Clrn1Q8K445 Mir9-2-201ENSMUST00000083490 72 ntBASIC2.13□□□□□ -2.07
Clrn1Q8K445 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
Clrn1Q8K445 Gm23859-201ENSMUST00000158383 64 ntBASIC2.12□□□□□ -2.07
Clrn1Q8K445 Gm22947-201ENSMUST00000158559 91 ntBASIC2.12□□□□□ -2.07
Clrn1Q8K445 Gm16584-201ENSMUST00000159267 189 ntBASIC2.12□□□□□ -2.07
Clrn1Q8K445 Gm27668-201ENSMUST00000184188 120 ntBASIC2.12□□□□□ -2.07
Clrn1Q8K445 Mir6925-201ENSMUST00000197857 70 ntBASIC2.12□□□□□ -2.07
Clrn1Q8K445 Gm45522-201ENSMUST00000210784 166 ntBASIC2.12□□□□□ -2.07
Clrn1Q8K445 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC2.12□□□□□ -2.07
Clrn1Q8K445 Gm22576-201ENSMUST00000083733 104 ntBASIC2.12□□□□□ -2.07
Clrn1Q8K445 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Clrn1Q8K445 Gm24916-201ENSMUST00000157287 79 ntBASIC2.11□□□□□ -2.07
Clrn1Q8K445 Gm24475-201ENSMUST00000157435 143 ntBASIC2.11□□□□□ -2.07
Clrn1Q8K445 Gm22387-201ENSMUST00000158191 131 ntBASIC2.11□□□□□ -2.07
Clrn1Q8K445 Gm22664-201ENSMUST00000158719 105 ntBASIC2.11□□□□□ -2.07
Clrn1Q8K445 Gm25707-201ENSMUST00000175120 96 ntBASIC2.11□□□□□ -2.07
Clrn1Q8K445 Gm43602-201ENSMUST00000196772 300 ntBASIC2.11□□□□□ -2.07
Clrn1Q8K445 CT025689.3-201ENSMUST00000223817 301 ntBASIC2.11□□□□□ -2.07
Clrn1Q8K445 Gm26326-201ENSMUST00000083070 129 ntBASIC2.11□□□□□ -2.07
Clrn1Q8K445 Snord104-201ENSMUST00000083192 70 ntBASIC2.11□□□□□ -2.07
Clrn1Q8K445 Gm24661-201ENSMUST00000083205 104 ntBASIC2.11□□□□□ -2.07
Clrn1Q8K445 Snord7-201ENSMUST00000083781 97 ntBASIC2.11□□□□□ -2.07
Clrn1Q8K445 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Clrn1Q8K445 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Clrn1Q8K445 Gm22750-201ENSMUST00000102076 103 ntBASIC2.1□□□□□ -2.07
Clrn1Q8K445 Gm14568-201ENSMUST00000119321 294 ntBASIC2.1□□□□□ -2.07
Clrn1Q8K445 Gm23656-201ENSMUST00000122626 112 ntBASIC2.1□□□□□ -2.07
Clrn1Q8K445 Gm26415-201ENSMUST00000157673 292 ntBASIC2.1□□□□□ -2.07
Clrn1Q8K445 Gm24900-201ENSMUST00000158128 134 ntBASIC2.1□□□□□ -2.07
Clrn1Q8K445 Gm16561-201ENSMUST00000163001 192 ntBASIC2.1□□□□□ -2.07
Clrn1Q8K445 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Clrn1Q8K445 Mir6353-201ENSMUST00000183596 113 ntBASIC2.1□□□□□ -2.07
Clrn1Q8K445 Mir489-201ENSMUST00000093599 107 ntBASIC2.1□□□□□ -2.07
Clrn1Q8K445 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Clrn1Q8K445 n-R5s73-201ENSMUST00000122508 107 ntBASIC2.09□□□□□ -2.07
Clrn1Q8K445 n-R5s188-201ENSMUST00000122646 105 ntBASIC2.09□□□□□ -2.07
Clrn1Q8K445 Gm23033-201ENSMUST00000157996 134 ntBASIC2.09□□□□□ -2.07
Clrn1Q8K445 Gm23509-201ENSMUST00000083080 160 ntBASIC2.09□□□□□ -2.07
Clrn1Q8K445 Snora3-201ENSMUST00000083082 132 ntBASIC2.09□□□□□ -2.07
Clrn1Q8K445 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.08
Clrn1Q8K445 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
Clrn1Q8K445 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
Clrn1Q8K445 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Clrn1Q8K445 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.08□□□□□ -2.08
Clrn1Q8K445 Gm44177-201ENSMUST00000204338 2667 ntBASIC2.08□□□□□ -2.08
Clrn1Q8K445 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.08□□□□□ -2.08
Clrn1Q8K445 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2.08□□□□□ -2.08
Clrn1Q8K445 Gm22666-201ENSMUST00000158717 164 ntBASIC2.08□□□□□ -2.08
Clrn1Q8K445 Gm24926-201ENSMUST00000178053 79 ntBASIC2.08□□□□□ -2.08
Clrn1Q8K445 Gm22632-201ENSMUST00000178266 79 ntBASIC2.08□□□□□ -2.08
Clrn1Q8K445 Mir497-201ENSMUST00000200557 84 ntBASIC2.08□□□□□ -2.08
Clrn1Q8K445 AC164612.2-202ENSMUST00000216314 253 ntBASIC2.08□□□□□ -2.08
Clrn1Q8K445 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.08□□□□□ -2.08
Clrn1Q8K445 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.08□□□□□ -2.08
Clrn1Q8K445 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.08□□□□□ -2.08
Clrn1Q8K445 Mir300-201ENSMUST00000083485 79 ntBASIC2.08□□□□□ -2.08
Clrn1Q8K445 Mir490-201ENSMUST00000093567 84 ntBASIC2.08□□□□□ -2.08
Clrn1Q8K445 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.08□□□□□ -2.08
Clrn1Q8K445 Gm25485-201ENSMUST00000104120 132 ntBASIC2.07□□□□□ -2.08
Clrn1Q8K445 Gm25938-201ENSMUST00000104139 166 ntBASIC2.07□□□□□ -2.08
Clrn1Q8K445 Gm25529-201ENSMUST00000104850 92 ntBASIC2.07□□□□□ -2.08
Clrn1Q8K445 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.07□□□□□ -2.08
Clrn1Q8K445 Gm23434-201ENSMUST00000157179 100 ntBASIC2.07□□□□□ -2.08
Clrn1Q8K445 Gm26004-201ENSMUST00000158804 116 ntBASIC2.07□□□□□ -2.08
Clrn1Q8K445 Gm26864-201ENSMUST00000181346 156 ntBASIC2.07□□□□□ -2.08
Clrn1Q8K445 Mir7068-201ENSMUST00000183439 74 ntBASIC2.07□□□□□ -2.08
Clrn1Q8K445 Gm22283-201ENSMUST00000082556 161 ntBASIC2.07□□□□□ -2.08
Clrn1Q8K445 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Clrn1Q8K445 Gm42718-201ENSMUST00000197319 2681 ntBASIC2.06□□□□□ -2.08
Clrn1Q8K445 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 164.7 ms