Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm23337-201ENSMUST00000158959 118 ntBASIC2.18□□□□□ -2.06
Brf1Q8CFK2 Gm24656-201ENSMUST00000177548 132 ntBASIC2.18□□□□□ -2.06
Brf1Q8CFK2 Gm9251-201ENSMUST00000197202 628 ntBASIC2.18□□□□□ -2.06
Brf1Q8CFK2 CT030645.1-201ENSMUST00000224020 231 ntBASIC2.18□□□□□ -2.06
Brf1Q8CFK2 Gm24261-201ENSMUST00000083744 104 ntBASIC2.18□□□□□ -2.06
Brf1Q8CFK2 Gm13246-201ENSMUST00000120994 315 ntBASIC2.17□□□□□ -2.06
Brf1Q8CFK2 Mir1949-201ENSMUST00000157434 141 ntBASIC2.17□□□□□ -2.06
Brf1Q8CFK2 Mir669n-201ENSMUST00000158636 54 ntBASIC2.17□□□□□ -2.06
Brf1Q8CFK2 Gm25994-201ENSMUST00000175392 101 ntBASIC2.17□□□□□ -2.06
Brf1Q8CFK2 Gm42988-201ENSMUST00000198116 225 ntBASIC2.17□□□□□ -2.06
Brf1Q8CFK2 AC153646.2-201ENSMUST00000220516 109 ntBASIC2.17□□□□□ -2.06
Brf1Q8CFK2 AC154328.1-201ENSMUST00000225875 307 ntBASIC2.17□□□□□ -2.06
Brf1Q8CFK2 Mir34a-201ENSMUST00000083559 102 ntBASIC2.17□□□□□ -2.06
Brf1Q8CFK2 Snora33-201ENSMUST00000093556 129 ntBASIC2.17□□□□□ -2.06
Brf1Q8CFK2 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
Brf1Q8CFK2 Gm24171-201ENSMUST00000104126 131 ntBASIC2.16□□□□□ -2.06
Brf1Q8CFK2 Snord100-201ENSMUST00000116836 74 ntBASIC2.16□□□□□ -2.06
Brf1Q8CFK2 Gm23656-201ENSMUST00000122626 112 ntBASIC2.16□□□□□ -2.06
Brf1Q8CFK2 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC2.16□□□□□ -2.06
Brf1Q8CFK2 Gm25113-201ENSMUST00000157185 143 ntBASIC2.16□□□□□ -2.06
Brf1Q8CFK2 Gm23080-201ENSMUST00000157846 103 ntBASIC2.16□□□□□ -2.06
Brf1Q8CFK2 Gm27672-201ENSMUST00000183751 204 ntBASIC2.16□□□□□ -2.06
Brf1Q8CFK2 Gm28669-201ENSMUST00000188400 100 ntBASIC2.16□□□□□ -2.06
Brf1Q8CFK2 AC151902.2-201ENSMUST00000226419 301 ntBASIC2.16□□□□□ -2.06
Brf1Q8CFK2 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
Brf1Q8CFK2 Gm22612-201ENSMUST00000158293 101 ntBASIC2.15□□□□□ -2.07
Brf1Q8CFK2 Gm24054-201ENSMUST00000158619 105 ntBASIC2.15□□□□□ -2.07
Brf1Q8CFK2 Gm22139-201ENSMUST00000158747 105 ntBASIC2.15□□□□□ -2.07
Brf1Q8CFK2 Gm25071-201ENSMUST00000175232 70 ntBASIC2.15□□□□□ -2.07
Brf1Q8CFK2 Mir7679-201ENSMUST00000183379 63 ntBASIC2.15□□□□□ -2.07
Brf1Q8CFK2 Gm28537-201ENSMUST00000189026 315 ntBASIC2.15□□□□□ -2.07
Brf1Q8CFK2 Gm29631-201ENSMUST00000191065 315 ntBASIC2.15□□□□□ -2.07
Brf1Q8CFK2 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC2.15□□□□□ -2.07
Brf1Q8CFK2 Mir7217-201ENSMUST00000200304 62 ntBASIC2.15□□□□□ -2.07
Brf1Q8CFK2 AL627387.1-201ENSMUST00000226063 250 ntBASIC2.15□□□□□ -2.07
Brf1Q8CFK2 Gm22306-201ENSMUST00000082692 107 ntBASIC2.15□□□□□ -2.07
Brf1Q8CFK2 Gm23772-201ENSMUST00000104433 102 ntBASIC2.14□□□□□ -2.07
Brf1Q8CFK2 Gm22803-201ENSMUST00000158049 283 ntBASIC2.14□□□□□ -2.07
Brf1Q8CFK2 Snora3-201ENSMUST00000083082 132 ntBASIC2.14□□□□□ -2.07
Brf1Q8CFK2 Gm24412-201ENSMUST00000083426 109 ntBASIC2.14□□□□□ -2.07
Brf1Q8CFK2 Mir758-201ENSMUST00000103260 81 ntBASIC2.13□□□□□ -2.07
Brf1Q8CFK2 Gm15069-201ENSMUST00000117792 192 ntBASIC2.13□□□□□ -2.07
Brf1Q8CFK2 Gm15068-201ENSMUST00000119796 192 ntBASIC2.13□□□□□ -2.07
Brf1Q8CFK2 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC2.13□□□□□ -2.07
Brf1Q8CFK2 Gm24770-201ENSMUST00000158505 92 ntBASIC2.13□□□□□ -2.07
Brf1Q8CFK2 Gm22664-201ENSMUST00000158719 105 ntBASIC2.13□□□□□ -2.07
Brf1Q8CFK2 Gm23813-201ENSMUST00000175153 77 ntBASIC2.13□□□□□ -2.07
Brf1Q8CFK2 Mir7683-201ENSMUST00000183842 61 ntBASIC2.13□□□□□ -2.07
Brf1Q8CFK2 Gm29603-201ENSMUST00000186792 334 ntBASIC2.13□□□□□ -2.07
Brf1Q8CFK2 Gm25820-202ENSMUST00000197479 128 ntBASIC2.13□□□□□ -2.07
Brf1Q8CFK2 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.12□□□□□ -2.07
Brf1Q8CFK2 Gm14567-201ENSMUST00000117155 174 ntBASIC2.12□□□□□ -2.07
Brf1Q8CFK2 Gm25279-201ENSMUST00000122608 133 ntBASIC2.12□□□□□ -2.07
Brf1Q8CFK2 Gm25425-201ENSMUST00000157611 96 ntBASIC2.12□□□□□ -2.07
Brf1Q8CFK2 Gm25882-201ENSMUST00000157784 85 ntBASIC2.12□□□□□ -2.07
Brf1Q8CFK2 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.12□□□□□ -2.07
Brf1Q8CFK2 Gm44464-201ENSMUST00000198010 138 ntBASIC2.12□□□□□ -2.07
Brf1Q8CFK2 Gm44320-201ENSMUST00000199276 86 ntBASIC2.12□□□□□ -2.07
Brf1Q8CFK2 Gm44859-201ENSMUST00000207831 94 ntBASIC2.12□□□□□ -2.07
Brf1Q8CFK2 Gm18502-201ENSMUST00000218679 199 ntBASIC2.12□□□□□ -2.07
Brf1Q8CFK2 Gm22738-201ENSMUST00000083440 147 ntBASIC2.12□□□□□ -2.07
Brf1Q8CFK2 Gm23320-201ENSMUST00000104462 127 ntBASIC2.11□□□□□ -2.07
Brf1Q8CFK2 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2.11□□□□□ -2.07
Brf1Q8CFK2 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Brf1Q8CFK2 Gm17020-201ENSMUST00000172274 274 ntBASIC2.11□□□□□ -2.07
Brf1Q8CFK2 Gm37778-201ENSMUST00000191732 190 ntBASIC2.11□□□□□ -2.07
Brf1Q8CFK2 Mir7021-201ENSMUST00000197026 63 ntBASIC2.11□□□□□ -2.07
Brf1Q8CFK2 Gm25697-201ENSMUST00000082902 98 ntBASIC2.11□□□□□ -2.07
Brf1Q8CFK2 Gm44177-201ENSMUST00000204338 2667 ntBASIC2.11□□□□□ -2.07
Brf1Q8CFK2 Gm22373-201ENSMUST00000104584 89 ntBASIC2.1□□□□□ -2.07
Brf1Q8CFK2 Gm22228-201ENSMUST00000157364 101 ntBASIC2.1□□□□□ -2.07
Brf1Q8CFK2 Gm25558-201ENSMUST00000158083 106 ntBASIC2.1□□□□□ -2.07
Brf1Q8CFK2 Gm43602-201ENSMUST00000196772 300 ntBASIC2.1□□□□□ -2.07
Brf1Q8CFK2 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Brf1Q8CFK2 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Brf1Q8CFK2 Gm24232-201ENSMUST00000104314 132 ntBASIC2.09□□□□□ -2.07
Brf1Q8CFK2 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.09□□□□□ -2.07
Brf1Q8CFK2 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC2.09□□□□□ -2.07
Brf1Q8CFK2 Gm24559-201ENSMUST00000157519 121 ntBASIC2.09□□□□□ -2.07
Brf1Q8CFK2 Gm27934-201ENSMUST00000158795 63 ntBASIC2.09□□□□□ -2.07
Brf1Q8CFK2 Gm24572-201ENSMUST00000175505 88 ntBASIC2.09□□□□□ -2.07
Brf1Q8CFK2 Mir6406-201ENSMUST00000183592 120 ntBASIC2.09□□□□□ -2.07
Brf1Q8CFK2 Mir7026-201ENSMUST00000184384 67 ntBASIC2.09□□□□□ -2.07
Brf1Q8CFK2 AC164612.2-202ENSMUST00000216314 253 ntBASIC2.09□□□□□ -2.07
Brf1Q8CFK2 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.09□□□□□ -2.07
Brf1Q8CFK2 AC120540.2-201ENSMUST00000221716 387 ntBASIC2.09□□□□□ -2.07
Brf1Q8CFK2 Mir490-201ENSMUST00000093567 84 ntBASIC2.09□□□□□ -2.07
Brf1Q8CFK2 Gm24907-201ENSMUST00000116932 128 ntBASIC2.08□□□□□ -2.08
Brf1Q8CFK2 Snord87-201ENSMUST00000175437 87 ntBASIC2.08□□□□□ -2.08
Brf1Q8CFK2 Mir6352-201ENSMUST00000184495 116 ntBASIC2.08□□□□□ -2.08
Brf1Q8CFK2 Gm43512-201ENSMUST00000198495 176 ntBASIC2.08□□□□□ -2.08
Brf1Q8CFK2 Gm23722-201ENSMUST00000083002 130 ntBASIC2.08□□□□□ -2.08
Brf1Q8CFK2 Gm25136-201ENSMUST00000083253 115 ntBASIC2.08□□□□□ -2.08
Brf1Q8CFK2 Gm22743-201ENSMUST00000083445 133 ntBASIC2.08□□□□□ -2.08
Brf1Q8CFK2 Mir201-201ENSMUST00000083470 66 ntBASIC2.08□□□□□ -2.08
Brf1Q8CFK2 Gm25915-201ENSMUST00000104265 126 ntBASIC2.07□□□□□ -2.08
Brf1Q8CFK2 Gm24984-201ENSMUST00000104454 133 ntBASIC2.07□□□□□ -2.08
Brf1Q8CFK2 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC2.07□□□□□ -2.08
Brf1Q8CFK2 Gm43381-201ENSMUST00000198553 165 ntBASIC2.07□□□□□ -2.08
Brf1Q8CFK2 Trav5-2-201ENSMUST00000199855 280 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 135.5 ms