Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Mir186-201ENSMUST00000083497 71 ntBASIC1.41□□□□□ -2.18
Ccdc28bQ8CEG5 Mir148b-201ENSMUST00000083626 97 ntBASIC1.41□□□□□ -2.18
Ccdc28bQ8CEG5 Mir218-1-201ENSMUST00000083669 110 ntBASIC1.41□□□□□ -2.18
Ccdc28bQ8CEG5 Gm24261-201ENSMUST00000083744 104 ntBASIC1.41□□□□□ -2.18
Ccdc28bQ8CEG5 Gm25627-201ENSMUST00000084003 153 ntBASIC1.41□□□□□ -2.18
Ccdc28bQ8CEG5 Gm6444-201ENSMUST00000119611 458 ntBASIC1.4□□□□□ -2.19
Ccdc28bQ8CEG5 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.4□□□□□ -2.19
Ccdc28bQ8CEG5 Gm23898-201ENSMUST00000158111 103 ntBASIC1.4□□□□□ -2.19
Ccdc28bQ8CEG5 Gm23113-201ENSMUST00000158477 99 ntBASIC1.4□□□□□ -2.19
Ccdc28bQ8CEG5 Gm26160-201ENSMUST00000158965 63 ntBASIC1.4□□□□□ -2.19
Ccdc28bQ8CEG5 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC1.4□□□□□ -2.19
Ccdc28bQ8CEG5 Snord87-201ENSMUST00000175437 87 ntBASIC1.4□□□□□ -2.19
Ccdc28bQ8CEG5 Gm16404-201ENSMUST00000177739 468 ntBASIC1.4□□□□□ -2.19
Ccdc28bQ8CEG5 Gm25730-201ENSMUST00000178753 165 ntBASIC1.4□□□□□ -2.19
Ccdc28bQ8CEG5 Gm14598-201ENSMUST00000180109 468 ntBASIC1.4□□□□□ -2.19
Ccdc28bQ8CEG5 Gm14625-201ENSMUST00000180231 468 ntBASIC1.4□□□□□ -2.19
Ccdc28bQ8CEG5 Gm28537-201ENSMUST00000189026 315 ntBASIC1.4□□□□□ -2.19
Ccdc28bQ8CEG5 Gm29631-201ENSMUST00000191065 315 ntBASIC1.4□□□□□ -2.19
Ccdc28bQ8CEG5 Gm44325-201ENSMUST00000196757 77 ntBASIC1.4□□□□□ -2.19
Ccdc28bQ8CEG5 Gm5002-201ENSMUST00000207145 223 ntBASIC1.4□□□□□ -2.19
Ccdc28bQ8CEG5 Snora3-201ENSMUST00000083082 132 ntBASIC1.4□□□□□ -2.19
Ccdc28bQ8CEG5 Gm14914-201ENSMUST00000117576 2031 ntBASIC1.4□□□□□ -2.19
Ccdc28bQ8CEG5 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.4□□□□□ -2.19
Ccdc28bQ8CEG5 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
Ccdc28bQ8CEG5 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Ccdc28bQ8CEG5 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Ccdc28bQ8CEG5 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Ccdc28bQ8CEG5 Gm6952-201ENSMUST00000118629 159 ntBASIC1.39□□□□□ -2.19
Ccdc28bQ8CEG5 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.39□□□□□ -2.19
Ccdc28bQ8CEG5 Gm24358-201ENSMUST00000158424 288 ntBASIC1.39□□□□□ -2.19
Ccdc28bQ8CEG5 Mir669n-201ENSMUST00000158636 54 ntBASIC1.39□□□□□ -2.19
Ccdc28bQ8CEG5 Gm19790-201ENSMUST00000214414 251 ntBASIC1.39□□□□□ -2.19
Ccdc28bQ8CEG5 AC159625.1-201ENSMUST00000220994 2625 ntBASIC1.38□□□□□ -2.19
Ccdc28bQ8CEG5 Gm22761-201ENSMUST00000102278 96 ntBASIC1.38□□□□□ -2.19
Ccdc28bQ8CEG5 Mir297a-2-201ENSMUST00000103795 90 ntBASIC1.38□□□□□ -2.19
Ccdc28bQ8CEG5 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.38□□□□□ -2.19
Ccdc28bQ8CEG5 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC1.38□□□□□ -2.19
Ccdc28bQ8CEG5 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.38□□□□□ -2.19
Ccdc28bQ8CEG5 Gm25464-201ENSMUST00000175481 107 ntBASIC1.38□□□□□ -2.19
Ccdc28bQ8CEG5 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Ccdc28bQ8CEG5 Gm38364-201ENSMUST00000191814 179 ntBASIC1.38□□□□□ -2.19
Ccdc28bQ8CEG5 Mir378a-201ENSMUST00000198300 66 ntBASIC1.38□□□□□ -2.19
Ccdc28bQ8CEG5 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.38□□□□□ -2.19
Ccdc28bQ8CEG5 AC134601.1-201ENSMUST00000221058 109 ntBASIC1.38□□□□□ -2.19
Ccdc28bQ8CEG5 Gm16976-205ENSMUST00000227324 226 ntBASIC1.38□□□□□ -2.19
Ccdc28bQ8CEG5 Mir320-201ENSMUST00000083594 82 ntBASIC1.38□□□□□ -2.19
Ccdc28bQ8CEG5 Gm26293-201ENSMUST00000104170 84 ntBASIC1.37□□□□□ -2.19
Ccdc28bQ8CEG5 Gm25323-201ENSMUST00000122555 103 ntBASIC1.37□□□□□ -2.19
Ccdc28bQ8CEG5 Gm22557-201ENSMUST00000157804 102 ntBASIC1.37□□□□□ -2.19
Ccdc28bQ8CEG5 Gm23558-201ENSMUST00000157823 80 ntBASIC1.37□□□□□ -2.19
Ccdc28bQ8CEG5 Mir6997-201ENSMUST00000184313 71 ntBASIC1.37□□□□□ -2.19
Ccdc28bQ8CEG5 Gm44921-201ENSMUST00000205290 301 ntBASIC1.37□□□□□ -2.19
Ccdc28bQ8CEG5 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC1.37□□□□□ -2.19
Ccdc28bQ8CEG5 Mir34a-201ENSMUST00000083559 102 ntBASIC1.37□□□□□ -2.19
Ccdc28bQ8CEG5 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
Ccdc28bQ8CEG5 Gm12309-201ENSMUST00000119889 182 ntBASIC1.36□□□□□ -2.19
Ccdc28bQ8CEG5 Gm22477-201ENSMUST00000122569 316 ntBASIC1.36□□□□□ -2.19
Ccdc28bQ8CEG5 Snord7-201ENSMUST00000083781 97 ntBASIC1.36□□□□□ -2.19
Ccdc28bQ8CEG5 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Ccdc28bQ8CEG5 Gm21940-201ENSMUST00000204940 2278 ntBASIC1.36□□□□□ -2.19
Ccdc28bQ8CEG5 Mir758-201ENSMUST00000103260 81 ntBASIC1.35□□□□□ -2.19
Ccdc28bQ8CEG5 Gm3788-201ENSMUST00000119949 136 ntBASIC1.35□□□□□ -2.19
Ccdc28bQ8CEG5 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC1.35□□□□□ -2.19
Ccdc28bQ8CEG5 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.35□□□□□ -2.19
Ccdc28bQ8CEG5 Gm26363-201ENSMUST00000158866 83 ntBASIC1.35□□□□□ -2.19
Ccdc28bQ8CEG5 Mir3103-201ENSMUST00000175474 67 ntBASIC1.35□□□□□ -2.19
Ccdc28bQ8CEG5 Mir466b-1-201ENSMUST00000177988 82 ntBASIC1.35□□□□□ -2.19
Ccdc28bQ8CEG5 Gm22264-201ENSMUST00000178200 107 ntBASIC1.35□□□□□ -2.19
Ccdc28bQ8CEG5 Mir6350-201ENSMUST00000183639 105 ntBASIC1.35□□□□□ -2.19
Ccdc28bQ8CEG5 Gm27711-201ENSMUST00000183802 118 ntBASIC1.35□□□□□ -2.19
Ccdc28bQ8CEG5 Gm9251-201ENSMUST00000197202 628 ntBASIC1.35□□□□□ -2.19
Ccdc28bQ8CEG5 AC129085.1-201ENSMUST00000225263 165 ntBASIC1.35□□□□□ -2.19
Ccdc28bQ8CEG5 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.35□□□□□ -2.19
Ccdc28bQ8CEG5 Mir653-201ENSMUST00000102402 85 ntBASIC1.34□□□□□ -2.19
Ccdc28bQ8CEG5 Gm24865-201ENSMUST00000103246 96 ntBASIC1.34□□□□□ -2.19
Ccdc28bQ8CEG5 Gm24171-201ENSMUST00000104126 131 ntBASIC1.34□□□□□ -2.19
Ccdc28bQ8CEG5 Gm23990-201ENSMUST00000117031 117 ntBASIC1.34□□□□□ -2.19
Ccdc28bQ8CEG5 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.34□□□□□ -2.19
Ccdc28bQ8CEG5 Gm11857-201ENSMUST00000119817 324 ntBASIC1.34□□□□□ -2.19
Ccdc28bQ8CEG5 Gm14775-201ENSMUST00000122089 310 ntBASIC1.34□□□□□ -2.19
Ccdc28bQ8CEG5 Gm22228-201ENSMUST00000157364 101 ntBASIC1.34□□□□□ -2.19
Ccdc28bQ8CEG5 Gm22850-201ENSMUST00000157714 82 ntBASIC1.34□□□□□ -2.19
Ccdc28bQ8CEG5 Gm16584-201ENSMUST00000159267 189 ntBASIC1.34□□□□□ -2.19
Ccdc28bQ8CEG5 Gm28669-201ENSMUST00000188400 100 ntBASIC1.34□□□□□ -2.19
Ccdc28bQ8CEG5 Trbv7-201ENSMUST00000193339 402 ntBASIC1.34□□□□□ -2.19
Ccdc28bQ8CEG5 Gm44922-201ENSMUST00000206690 90 ntBASIC1.34□□□□□ -2.19
Ccdc28bQ8CEG5 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.34□□□□□ -2.19
Ccdc28bQ8CEG5 Gm22743-201ENSMUST00000083445 133 ntBASIC1.34□□□□□ -2.19
Ccdc28bQ8CEG5 Gm25759-201ENSMUST00000103988 129 ntBASIC1.33□□□□□ -2.2
Ccdc28bQ8CEG5 Gm22545-201ENSMUST00000104350 132 ntBASIC1.33□□□□□ -2.2
Ccdc28bQ8CEG5 Gm13246-201ENSMUST00000120994 315 ntBASIC1.33□□□□□ -2.2
Ccdc28bQ8CEG5 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.33□□□□□ -2.2
Ccdc28bQ8CEG5 Gm25828-201ENSMUST00000157087 95 ntBASIC1.33□□□□□ -2.2
Ccdc28bQ8CEG5 Gm25599-201ENSMUST00000157816 103 ntBASIC1.33□□□□□ -2.2
Ccdc28bQ8CEG5 Gm24131-201ENSMUST00000158539 107 ntBASIC1.33□□□□□ -2.2
Ccdc28bQ8CEG5 Gm23208-201ENSMUST00000158666 127 ntBASIC1.33□□□□□ -2.2
Ccdc28bQ8CEG5 Gm24106-201ENSMUST00000175498 127 ntBASIC1.33□□□□□ -2.2
Ccdc28bQ8CEG5 Mir5118-201ENSMUST00000175551 67 ntBASIC1.33□□□□□ -2.2
Ccdc28bQ8CEG5 Mir7068-201ENSMUST00000183439 74 ntBASIC1.33□□□□□ -2.2
Ccdc28bQ8CEG5 Gm27517-201ENSMUST00000184347 236 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms