Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm23898-201ENSMUST00000158111 103 ntBASIC1.42□□□□□ -2.18
Nup88Q8CEC0 Gm22164-201ENSMUST00000158413 106 ntBASIC1.42□□□□□ -2.18
Nup88Q8CEC0 Gm22862-201ENSMUST00000178593 121 ntBASIC1.42□□□□□ -2.18
Nup88Q8CEC0 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.42□□□□□ -2.18
Nup88Q8CEC0 Gm23378-201ENSMUST00000082942 107 ntBASIC1.42□□□□□ -2.18
Nup88Q8CEC0 Gm25759-201ENSMUST00000103988 129 ntBASIC1.41□□□□□ -2.18
Nup88Q8CEC0 Gm25170-201ENSMUST00000104191 129 ntBASIC1.41□□□□□ -2.18
Nup88Q8CEC0 Gm13801-201ENSMUST00000120750 160 ntBASIC1.41□□□□□ -2.18
Nup88Q8CEC0 Gm22553-201ENSMUST00000157797 295 ntBASIC1.41□□□□□ -2.18
Nup88Q8CEC0 Gm23665-201ENSMUST00000158054 62 ntBASIC1.41□□□□□ -2.18
Nup88Q8CEC0 Gm22403-201ENSMUST00000174919 84 ntBASIC1.41□□□□□ -2.18
Nup88Q8CEC0 Mir3061-201ENSMUST00000175129 91 ntBASIC1.41□□□□□ -2.18
Nup88Q8CEC0 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Nup88Q8CEC0 Mir7052-201ENSMUST00000184821 65 ntBASIC1.41□□□□□ -2.18
Nup88Q8CEC0 Gm43602-201ENSMUST00000196772 300 ntBASIC1.41□□□□□ -2.18
Nup88Q8CEC0 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.41□□□□□ -2.18
Nup88Q8CEC0 Mir490-201ENSMUST00000093567 84 ntBASIC1.41□□□□□ -2.18
Nup88Q8CEC0 Gm25976-201ENSMUST00000158695 130 ntBASIC1.4□□□□□ -2.19
Nup88Q8CEC0 Gm44052-201ENSMUST00000203382 396 ntBASIC1.4□□□□□ -2.19
Nup88Q8CEC0 Gm44909-201ENSMUST00000208756 165 ntBASIC1.4□□□□□ -2.19
Nup88Q8CEC0 Mir196b-201ENSMUST00000083509 85 ntBASIC1.4□□□□□ -2.19
Nup88Q8CEC0 Mir448-201ENSMUST00000083516 112 ntBASIC1.4□□□□□ -2.19
Nup88Q8CEC0 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Nup88Q8CEC0 Gm24915-201ENSMUST00000157288 78 ntBASIC1.39□□□□□ -2.19
Nup88Q8CEC0 Gm23106-201ENSMUST00000157554 101 ntBASIC1.39□□□□□ -2.19
Nup88Q8CEC0 Gm25663-201ENSMUST00000157698 135 ntBASIC1.39□□□□□ -2.19
Nup88Q8CEC0 Gm25362-201ENSMUST00000158854 105 ntBASIC1.39□□□□□ -2.19
Nup88Q8CEC0 Gm25643-201ENSMUST00000158874 103 ntBASIC1.39□□□□□ -2.19
Nup88Q8CEC0 Gm22929-201ENSMUST00000175517 107 ntBASIC1.39□□□□□ -2.19
Nup88Q8CEC0 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.39□□□□□ -2.19
Nup88Q8CEC0 Gm37889-201ENSMUST00000194174 251 ntBASIC1.39□□□□□ -2.19
Nup88Q8CEC0 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.39□□□□□ -2.19
Nup88Q8CEC0 Gm44483-201ENSMUST00000197203 97 ntBASIC1.39□□□□□ -2.19
Nup88Q8CEC0 mt-Ti-201ENSMUST00000082393 69 ntBASIC1.39□□□□□ -2.19
Nup88Q8CEC0 Gm22884-201ENSMUST00000083127 140 ntBASIC1.39□□□□□ -2.19
Nup88Q8CEC0 Gm24494-201ENSMUST00000083804 81 ntBASIC1.39□□□□□ -2.19
Nup88Q8CEC0 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Nup88Q8CEC0 Gm23328-201ENSMUST00000157418 132 ntBASIC1.38□□□□□ -2.19
Nup88Q8CEC0 Gm22802-201ENSMUST00000175621 89 ntBASIC1.38□□□□□ -2.19
Nup88Q8CEC0 Gm29022-201ENSMUST00000190702 225 ntBASIC1.38□□□□□ -2.19
Nup88Q8CEC0 Gm38183-201ENSMUST00000193189 205 ntBASIC1.38□□□□□ -2.19
Nup88Q8CEC0 AC165157.3-201ENSMUST00000220815 103 ntBASIC1.38□□□□□ -2.19
Nup88Q8CEC0 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.38□□□□□ -2.19
Nup88Q8CEC0 Gm24523-201ENSMUST00000083965 132 ntBASIC1.38□□□□□ -2.19
Nup88Q8CEC0 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Nup88Q8CEC0 Gm22785-201ENSMUST00000104087 132 ntBASIC1.37□□□□□ -2.19
Nup88Q8CEC0 Gm11334-201ENSMUST00000121969 156 ntBASIC1.37□□□□□ -2.19
Nup88Q8CEC0 Gm22559-201ENSMUST00000157329 134 ntBASIC1.37□□□□□ -2.19
Nup88Q8CEC0 Gm23419-201ENSMUST00000175523 84 ntBASIC1.37□□□□□ -2.19
Nup88Q8CEC0 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.37□□□□□ -2.19
Nup88Q8CEC0 Gm22980-201ENSMUST00000082608 70 ntBASIC1.37□□□□□ -2.19
Nup88Q8CEC0 Gm24624-201ENSMUST00000082617 164 ntBASIC1.37□□□□□ -2.19
Nup88Q8CEC0 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Nup88Q8CEC0 Gm24594-201ENSMUST00000122502 99 ntBASIC1.36□□□□□ -2.19
Nup88Q8CEC0 Gm26363-201ENSMUST00000158866 83 ntBASIC1.36□□□□□ -2.19
Nup88Q8CEC0 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC1.36□□□□□ -2.19
Nup88Q8CEC0 Gm23002-201ENSMUST00000179221 107 ntBASIC1.36□□□□□ -2.19
Nup88Q8CEC0 Gm37715-201ENSMUST00000193206 235 ntBASIC1.36□□□□□ -2.19
Nup88Q8CEC0 Mir200b-201ENSMUST00000083615 70 ntBASIC1.36□□□□□ -2.19
Nup88Q8CEC0 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Nup88Q8CEC0 Gm11857-201ENSMUST00000119817 324 ntBASIC1.35□□□□□ -2.19
Nup88Q8CEC0 Gm26482-201ENSMUST00000158015 62 ntBASIC1.35□□□□□ -2.19
Nup88Q8CEC0 Mir669k-201ENSMUST00000177742 127 ntBASIC1.35□□□□□ -2.19
Nup88Q8CEC0 Gm25673-201ENSMUST00000179957 127 ntBASIC1.35□□□□□ -2.19
Nup88Q8CEC0 Gm16399-201ENSMUST00000181423 219 ntBASIC1.35□□□□□ -2.19
Nup88Q8CEC0 Gm27711-201ENSMUST00000183802 118 ntBASIC1.35□□□□□ -2.19
Nup88Q8CEC0 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.35□□□□□ -2.19
Nup88Q8CEC0 AC160984.1-201ENSMUST00000225855 3154 ntBASIC1.34□□□□□ -2.19
Nup88Q8CEC0 Gm13797-201ENSMUST00000121792 120 ntBASIC1.34□□□□□ -2.19
Nup88Q8CEC0 Gm26089-201ENSMUST00000157898 107 ntBASIC1.34□□□□□ -2.19
Nup88Q8CEC0 Gm23542-201ENSMUST00000158208 96 ntBASIC1.34□□□□□ -2.19
Nup88Q8CEC0 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Nup88Q8CEC0 Gm25141-201ENSMUST00000083177 107 ntBASIC1.34□□□□□ -2.19
Nup88Q8CEC0 Rny1-201ENSMUST00000083767 112 ntBASIC1.34□□□□□ -2.19
Nup88Q8CEC0 Mir881-201ENSMUST00000104844 78 ntBASIC1.33□□□□□ -2.2
Nup88Q8CEC0 Gm24588-201ENSMUST00000116696 83 ntBASIC1.33□□□□□ -2.2
Nup88Q8CEC0 Gm11856-201ENSMUST00000118712 276 ntBASIC1.33□□□□□ -2.2
Nup88Q8CEC0 Gm24942-201ENSMUST00000158328 114 ntBASIC1.33□□□□□ -2.2
Nup88Q8CEC0 Gm25768-201ENSMUST00000158570 98 ntBASIC1.33□□□□□ -2.2
Nup88Q8CEC0 Gm23339-201ENSMUST00000158962 139 ntBASIC1.33□□□□□ -2.2
Nup88Q8CEC0 Gm44057-201ENSMUST00000204547 96 ntBASIC1.33□□□□□ -2.2
Nup88Q8CEC0 n-R5s183-201ENSMUST00000083939 115 ntBASIC1.33□□□□□ -2.2
Nup88Q8CEC0 Gm11204-201ENSMUST00000122438 147 ntBASIC1.32□□□□□ -2.2
Nup88Q8CEC0 Gm25558-201ENSMUST00000158083 106 ntBASIC1.32□□□□□ -2.2
Nup88Q8CEC0 Gm25715-201ENSMUST00000158627 125 ntBASIC1.32□□□□□ -2.2
Nup88Q8CEC0 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.32□□□□□ -2.2
Nup88Q8CEC0 Mir6394-201ENSMUST00000184738 99 ntBASIC1.32□□□□□ -2.2
Nup88Q8CEC0 Gm44326-201ENSMUST00000198226 101 ntBASIC1.32□□□□□ -2.2
Nup88Q8CEC0 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
Nup88Q8CEC0 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.32□□□□□ -2.2
Nup88Q8CEC0 Gm22743-201ENSMUST00000083445 133 ntBASIC1.32□□□□□ -2.2
Nup88Q8CEC0 Gm25650-201ENSMUST00000083784 162 ntBASIC1.32□□□□□ -2.2
Nup88Q8CEC0 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
Nup88Q8CEC0 Snord71-201ENSMUST00000104361 85 ntBASIC1.31□□□□□ -2.2
Nup88Q8CEC0 Gm25496-201ENSMUST00000104430 120 ntBASIC1.31□□□□□ -2.2
Nup88Q8CEC0 Snord89-201ENSMUST00000104516 110 ntBASIC1.31□□□□□ -2.2
Nup88Q8CEC0 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.31□□□□□ -2.2
Nup88Q8CEC0 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.31□□□□□ -2.2
Nup88Q8CEC0 Gm23466-201ENSMUST00000157133 106 ntBASIC1.31□□□□□ -2.2
Nup88Q8CEC0 Gm24634-201ENSMUST00000158672 107 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 130.1 ms