Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm22196-201ENSMUST00000116865 109 ntBASIC3.01□□□□□ -1.93
Usp40Q8BWR4 Gm25323-201ENSMUST00000122555 103 ntBASIC3.01□□□□□ -1.93
Usp40Q8BWR4 Gm16355-201ENSMUST00000128606 231 ntBASIC3.01□□□□□ -1.93
Usp40Q8BWR4 Gm23859-201ENSMUST00000158383 64 ntBASIC3.01□□□□□ -1.93
Usp40Q8BWR4 Gm24277-201ENSMUST00000158661 104 ntBASIC3.01□□□□□ -1.93
Usp40Q8BWR4 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC3.01□□□□□ -1.93
Usp40Q8BWR4 Mir8090-201ENSMUST00000185078 136 ntBASIC3.01□□□□□ -1.93
Usp40Q8BWR4 Gm20058-201ENSMUST00000186939 284 ntBASIC3.01□□□□□ -1.93
Usp40Q8BWR4 AC125167.1-201ENSMUST00000198698 141 ntBASIC3.01□□□□□ -1.93
Usp40Q8BWR4 Gm44921-201ENSMUST00000205290 301 ntBASIC3.01□□□□□ -1.93
Usp40Q8BWR4 Gm19563-201ENSMUST00000222031 270 ntBASIC3.01□□□□□ -1.93
Usp40Q8BWR4 AC129202.2-201ENSMUST00000225123 177 ntBASIC3.01□□□□□ -1.93
Usp40Q8BWR4 Gm24661-201ENSMUST00000083205 104 ntBASIC3.01□□□□□ -1.93
Usp40Q8BWR4 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
Usp40Q8BWR4 AC152979.2-201ENSMUST00000219702 3814 ntBASIC3.01□□□□□ -1.93
Usp40Q8BWR4 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Usp40Q8BWR4 Gm24908-201ENSMUST00000157294 127 ntBASIC3□□□□□ -1.93
Usp40Q8BWR4 Gm24878-201ENSMUST00000158782 104 ntBASIC3□□□□□ -1.93
Usp40Q8BWR4 Hmgb1l-201ENSMUST00000082150 571 ntBASIC3□□□□□ -1.93
Usp40Q8BWR4 Gm25588-201ENSMUST00000082501 140 ntBASIC3□□□□□ -1.93
Usp40Q8BWR4 AC123052.1-201ENSMUST00000220604 4616 ntBASIC3□□□□□ -1.93
Usp40Q8BWR4 Gm45461-201ENSMUST00000211726 4535 ntBASIC3□□□□□ -1.93
Usp40Q8BWR4 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Usp40Q8BWR4 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.99□□□□□ -1.93
Usp40Q8BWR4 Mir547-201ENSMUST00000102051 78 ntBASIC2.99□□□□□ -1.93
Usp40Q8BWR4 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.99□□□□□ -1.93
Usp40Q8BWR4 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.99□□□□□ -1.93
Usp40Q8BWR4 Gm26280-201ENSMUST00000157096 101 ntBASIC2.99□□□□□ -1.93
Usp40Q8BWR4 Gm22079-201ENSMUST00000157592 106 ntBASIC2.99□□□□□ -1.93
Usp40Q8BWR4 Gm22093-201ENSMUST00000158980 111 ntBASIC2.99□□□□□ -1.93
Usp40Q8BWR4 Gm22800-201ENSMUST00000175627 94 ntBASIC2.99□□□□□ -1.93
Usp40Q8BWR4 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Usp40Q8BWR4 Mir6402-201ENSMUST00000183406 80 ntBASIC2.99□□□□□ -1.93
Usp40Q8BWR4 Mir6406-201ENSMUST00000183592 120 ntBASIC2.99□□□□□ -1.93
Usp40Q8BWR4 Mir7026-201ENSMUST00000184384 67 ntBASIC2.99□□□□□ -1.93
Usp40Q8BWR4 Gm6801-201ENSMUST00000190697 339 ntBASIC2.99□□□□□ -1.93
Usp40Q8BWR4 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.99□□□□□ -1.93
Usp40Q8BWR4 Gm23507-201ENSMUST00000083078 107 ntBASIC2.99□□□□□ -1.93
Usp40Q8BWR4 Mir340-201ENSMUST00000083483 98 ntBASIC2.99□□□□□ -1.93
Usp40Q8BWR4 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.99□□□□□ -1.93
Usp40Q8BWR4 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Usp40Q8BWR4 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
Usp40Q8BWR4 Gm23951-201ENSMUST00000104029 132 ntBASIC2.98□□□□□ -1.93
Usp40Q8BWR4 Gm24468-201ENSMUST00000104489 104 ntBASIC2.98□□□□□ -1.93
Usp40Q8BWR4 Gm14567-201ENSMUST00000117155 174 ntBASIC2.98□□□□□ -1.93
Usp40Q8BWR4 Gm24237-201ENSMUST00000157790 132 ntBASIC2.98□□□□□ -1.93
Usp40Q8BWR4 Gm25012-201ENSMUST00000158396 164 ntBASIC2.98□□□□□ -1.93
Usp40Q8BWR4 Gm24572-201ENSMUST00000175505 88 ntBASIC2.98□□□□□ -1.93
Usp40Q8BWR4 Gm23567-201ENSMUST00000178005 107 ntBASIC2.98□□□□□ -1.93
Usp40Q8BWR4 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.98□□□□□ -1.93
Usp40Q8BWR4 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Usp40Q8BWR4 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
Usp40Q8BWR4 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.98□□□□□ -1.93
Usp40Q8BWR4 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
Usp40Q8BWR4 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.97□□□□□ -1.93
Usp40Q8BWR4 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Usp40Q8BWR4 Gm22803-201ENSMUST00000158049 283 ntBASIC2.97□□□□□ -1.93
Usp40Q8BWR4 Gm27698-201ENSMUST00000184060 249 ntBASIC2.97□□□□□ -1.93
Usp40Q8BWR4 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.97□□□□□ -1.93
Usp40Q8BWR4 AC127371.3-201ENSMUST00000228129 415 ntBASIC2.97□□□□□ -1.93
Usp40Q8BWR4 Gm24313-201ENSMUST00000082561 133 ntBASIC2.97□□□□□ -1.93
Usp40Q8BWR4 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Usp40Q8BWR4 Gm15069-201ENSMUST00000117792 192 ntBASIC2.96□□□□□ -1.94
Usp40Q8BWR4 Gm6444-201ENSMUST00000119611 458 ntBASIC2.96□□□□□ -1.94
Usp40Q8BWR4 Gm15068-201ENSMUST00000119796 192 ntBASIC2.96□□□□□ -1.94
Usp40Q8BWR4 Gm23788-201ENSMUST00000122535 106 ntBASIC2.96□□□□□ -1.94
Usp40Q8BWR4 Gm22540-201ENSMUST00000158168 117 ntBASIC2.96□□□□□ -1.94
Usp40Q8BWR4 Gm24769-201ENSMUST00000158506 129 ntBASIC2.96□□□□□ -1.94
Usp40Q8BWR4 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC2.96□□□□□ -1.94
Usp40Q8BWR4 Gm26864-201ENSMUST00000181346 156 ntBASIC2.96□□□□□ -1.94
Usp40Q8BWR4 Gm28270-201ENSMUST00000188550 109 ntBASIC2.96□□□□□ -1.94
Usp40Q8BWR4 Gm28328-201ENSMUST00000188869 109 ntBASIC2.96□□□□□ -1.94
Usp40Q8BWR4 AC154296.1-201ENSMUST00000198150 67 ntBASIC2.96□□□□□ -1.94
Usp40Q8BWR4 Gm45429-201ENSMUST00000209527 172 ntBASIC2.96□□□□□ -1.94
Usp40Q8BWR4 Gm24099-201ENSMUST00000083384 107 ntBASIC2.96□□□□□ -1.94
Usp40Q8BWR4 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Usp40Q8BWR4 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
Usp40Q8BWR4 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.95□□□□□ -1.94
Usp40Q8BWR4 Gm23654-201ENSMUST00000116758 126 ntBASIC2.95□□□□□ -1.94
Usp40Q8BWR4 Gm23933-201ENSMUST00000178405 79 ntBASIC2.95□□□□□ -1.94
Usp40Q8BWR4 Gm43722-201ENSMUST00000196054 124 ntBASIC2.95□□□□□ -1.94
Usp40Q8BWR4 Gm44476-201ENSMUST00000196225 91 ntBASIC2.95□□□□□ -1.94
Usp40Q8BWR4 Gm23790-201ENSMUST00000083013 107 ntBASIC2.95□□□□□ -1.94
Usp40Q8BWR4 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.95□□□□□ -1.94
Usp40Q8BWR4 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC2.94□□□□□ -1.94
Usp40Q8BWR4 Snord11-201ENSMUST00000158468 84 ntBASIC2.94□□□□□ -1.94
Usp40Q8BWR4 Gm25633-201ENSMUST00000178565 107 ntBASIC2.94□□□□□ -1.94
Usp40Q8BWR4 Gm27582-201ENSMUST00000184084 126 ntBASIC2.94□□□□□ -1.94
Usp40Q8BWR4 Gm43512-201ENSMUST00000198495 176 ntBASIC2.94□□□□□ -1.94
Usp40Q8BWR4 Mir1291-201ENSMUST00000199842 117 ntBASIC2.94□□□□□ -1.94
Usp40Q8BWR4 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.94□□□□□ -1.94
Usp40Q8BWR4 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.94□□□□□ -1.94
Usp40Q8BWR4 Gm22805-201ENSMUST00000082739 107 ntBASIC2.94□□□□□ -1.94
Usp40Q8BWR4 Gm23247-201ENSMUST00000083373 107 ntBASIC2.94□□□□□ -1.94
Usp40Q8BWR4 Snora34-201ENSMUST00000083402 138 ntBASIC2.94□□□□□ -1.94
Usp40Q8BWR4 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
Usp40Q8BWR4 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Usp40Q8BWR4 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Usp40Q8BWR4 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.93□□□□□ -1.94
Usp40Q8BWR4 Gm14674-201ENSMUST00000117816 342 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 137.7 ms