Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm26236-201ENSMUST00000175536 137 ntBASIC0.56□□□□□ -2.32
Ccdc40Q8BI79 Mir6540-201ENSMUST00000184886 108 ntBASIC0.56□□□□□ -2.32
Ccdc40Q8BI79 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC0.56□□□□□ -2.32
Ccdc40Q8BI79 Gm38060-201ENSMUST00000194822 464 ntBASIC0.56□□□□□ -2.32
Ccdc40Q8BI79 AC154296.2-201ENSMUST00000214696 545 ntBASIC0.56□□□□□ -2.32
Ccdc40Q8BI79 Gm26495-201ENSMUST00000083152 137 ntBASIC0.56□□□□□ -2.32
Ccdc40Q8BI79 Gm22021-201ENSMUST00000104353 107 ntBASIC0.55□□□□□ -2.32
Ccdc40Q8BI79 Gm24385-201ENSMUST00000122694 350 ntBASIC0.55□□□□□ -2.32
Ccdc40Q8BI79 Gm24501-201ENSMUST00000158452 62 ntBASIC0.55□□□□□ -2.32
Ccdc40Q8BI79 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC0.55□□□□□ -2.32
Ccdc40Q8BI79 Gm24920-201ENSMUST00000083018 85 ntBASIC0.55□□□□□ -2.32
Ccdc40Q8BI79 Gm24453-201ENSMUST00000083346 76 ntBASIC0.55□□□□□ -2.32
Ccdc40Q8BI79 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
Ccdc40Q8BI79 Gm25538-201ENSMUST00000101943 107 ntBASIC0.54□□□□□ -2.32
Ccdc40Q8BI79 Gm22482-201ENSMUST00000122563 359 ntBASIC0.54□□□□□ -2.32
Ccdc40Q8BI79 Gm23982-201ENSMUST00000157141 106 ntBASIC0.54□□□□□ -2.32
Ccdc40Q8BI79 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.54□□□□□ -2.32
Ccdc40Q8BI79 Mir6389-201ENSMUST00000183661 102 ntBASIC0.54□□□□□ -2.32
Ccdc40Q8BI79 Gm28669-201ENSMUST00000188400 100 ntBASIC0.54□□□□□ -2.32
Ccdc40Q8BI79 Gm43432-201ENSMUST00000196352 121 ntBASIC0.54□□□□□ -2.32
Ccdc40Q8BI79 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.54□□□□□ -2.32
Ccdc40Q8BI79 Gm23340-201ENSMUST00000158955 123 ntBASIC0.53□□□□□ -2.32
Ccdc40Q8BI79 Mir6350-201ENSMUST00000183639 105 ntBASIC0.53□□□□□ -2.32
Ccdc40Q8BI79 Gm43976-201ENSMUST00000203637 235 ntBASIC0.53□□□□□ -2.32
Ccdc40Q8BI79 Gm44687-201ENSMUST00000204975 235 ntBASIC0.53□□□□□ -2.32
Ccdc40Q8BI79 Gm45471-201ENSMUST00000211270 281 ntBASIC0.53□□□□□ -2.32
Ccdc40Q8BI79 Gm24616-201ENSMUST00000083274 139 ntBASIC0.53□□□□□ -2.32
Ccdc40Q8BI79 Snord89-201ENSMUST00000104516 110 ntBASIC0.52□□□□□ -2.33
Ccdc40Q8BI79 Gm25901-201ENSMUST00000158494 130 ntBASIC0.52□□□□□ -2.33
Ccdc40Q8BI79 Gm23024-201ENSMUST00000158770 292 ntBASIC0.52□□□□□ -2.33
Ccdc40Q8BI79 Gm16539-201ENSMUST00000160086 327 ntBASIC0.52□□□□□ -2.33
Ccdc40Q8BI79 Gm27997-201ENSMUST00000184942 69 ntBASIC0.52□□□□□ -2.33
Ccdc40Q8BI79 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
Ccdc40Q8BI79 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.52□□□□□ -2.33
Ccdc40Q8BI79 Gm25793-201ENSMUST00000083287 107 ntBASIC0.52□□□□□ -2.33
Ccdc40Q8BI79 AC160984.1-201ENSMUST00000225855 3154 ntBASIC0.51□□□□□ -2.33
Ccdc40Q8BI79 Gm14946-201ENSMUST00000119859 296 ntBASIC0.51□□□□□ -2.33
Ccdc40Q8BI79 Gm27289-201ENSMUST00000183341 82 ntBASIC0.51□□□□□ -2.33
Ccdc40Q8BI79 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC0.51□□□□□ -2.33
Ccdc40Q8BI79 Gm24345-201ENSMUST00000158706 124 ntBASIC0.5□□□□□ -2.33
Ccdc40Q8BI79 Gm37313-201ENSMUST00000191673 290 ntBASIC0.5□□□□□ -2.33
Ccdc40Q8BI79 Gm44052-201ENSMUST00000203382 396 ntBASIC0.5□□□□□ -2.33
Ccdc40Q8BI79 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC0.5□□□□□ -2.33
Ccdc40Q8BI79 Gm45544-201ENSMUST00000211130 88 ntBASIC0.5□□□□□ -2.33
Ccdc40Q8BI79 Gm23853-201ENSMUST00000158375 104 ntBASIC0.49□□□□□ -2.33
Ccdc40Q8BI79 AC164297.5-201ENSMUST00000224365 198 ntBASIC0.49□□□□□ -2.33
Ccdc40Q8BI79 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.49□□□□□ -2.33
Ccdc40Q8BI79 Gm23845-201ENSMUST00000083834 152 ntBASIC0.49□□□□□ -2.33
Ccdc40Q8BI79 Gm10730-201ENSMUST00000194097 2723 ntBASIC0.49□□□□□ -2.33
Ccdc40Q8BI79 Gm26073-201ENSMUST00000179906 127 ntBASIC0.48□□□□□ -2.33
Ccdc40Q8BI79 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC0.48□□□□□ -2.33
Ccdc40Q8BI79 Gm29512-201ENSMUST00000185544 315 ntBASIC0.48□□□□□ -2.33
Ccdc40Q8BI79 Gm29665-201ENSMUST00000191457 528 ntBASIC0.48□□□□□ -2.33
Ccdc40Q8BI79 AC129085.1-201ENSMUST00000225263 165 ntBASIC0.48□□□□□ -2.33
Ccdc40Q8BI79 Gm24527-201ENSMUST00000082920 107 ntBASIC0.48□□□□□ -2.33
Ccdc40Q8BI79 Gm22364-201ENSMUST00000083097 98 ntBASIC0.48□□□□□ -2.33
Ccdc40Q8BI79 Gm14671-201ENSMUST00000121790 262 ntBASIC0.47□□□□□ -2.33
Ccdc40Q8BI79 Gm26255-201ENSMUST00000122492 103 ntBASIC0.47□□□□□ -2.33
Ccdc40Q8BI79 Gm24963-201ENSMUST00000157916 144 ntBASIC0.47□□□□□ -2.33
Ccdc40Q8BI79 Gm22801-201ENSMUST00000175624 84 ntBASIC0.47□□□□□ -2.33
Ccdc40Q8BI79 Gm25138-201ENSMUST00000083248 136 ntBASIC0.47□□□□□ -2.33
Ccdc40Q8BI79 Mir500-201ENSMUST00000093600 92 ntBASIC0.47□□□□□ -2.33
Ccdc40Q8BI79 Snord71-201ENSMUST00000104361 85 ntBASIC0.46□□□□□ -2.34
Ccdc40Q8BI79 Gm13801-201ENSMUST00000120750 160 ntBASIC0.46□□□□□ -2.34
Ccdc40Q8BI79 Gm23640-201ENSMUST00000157860 104 ntBASIC0.46□□□□□ -2.34
Ccdc40Q8BI79 Gm25976-201ENSMUST00000158695 130 ntBASIC0.46□□□□□ -2.34
Ccdc40Q8BI79 Gm26194-201ENSMUST00000175036 71 ntBASIC0.46□□□□□ -2.34
Ccdc40Q8BI79 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC0.46□□□□□ -2.34
Ccdc40Q8BI79 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC0.46□□□□□ -2.34
Ccdc40Q8BI79 Gm44959-201ENSMUST00000209127 231 ntBASIC0.46□□□□□ -2.34
Ccdc40Q8BI79 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.46□□□□□ -2.34
Ccdc40Q8BI79 Snora20-201ENSMUST00000082703 128 ntBASIC0.46□□□□□ -2.34
Ccdc40Q8BI79 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
Ccdc40Q8BI79 Gm12771-201ENSMUST00000120246 135 ntBASIC0.45□□□□□ -2.34
Ccdc40Q8BI79 Gm22387-201ENSMUST00000158191 131 ntBASIC0.45□□□□□ -2.34
Ccdc40Q8BI79 Gm44488-201ENSMUST00000199467 119 ntBASIC0.45□□□□□ -2.34
Ccdc40Q8BI79 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC0.45□□□□□ -2.34
Ccdc40Q8BI79 Mir30a-201ENSMUST00000083471 71 ntBASIC0.45□□□□□ -2.34
Ccdc40Q8BI79 Mir451a-201ENSMUST00000093557 72 ntBASIC0.45□□□□□ -2.34
Ccdc40Q8BI79 Gm25878-201ENSMUST00000104327 93 ntBASIC0.44□□□□□ -2.34
Ccdc40Q8BI79 Gm23605-201ENSMUST00000157255 127 ntBASIC0.44□□□□□ -2.34
Ccdc40Q8BI79 Gm25393-201ENSMUST00000157336 285 ntBASIC0.44□□□□□ -2.34
Ccdc40Q8BI79 Gm22553-201ENSMUST00000157797 295 ntBASIC0.44□□□□□ -2.34
Ccdc40Q8BI79 Gm22565-201ENSMUST00000175540 69 ntBASIC0.44□□□□□ -2.34
Ccdc40Q8BI79 Gm38183-201ENSMUST00000193189 205 ntBASIC0.44□□□□□ -2.34
Ccdc40Q8BI79 Gm30155-201ENSMUST00000223458 339 ntBASIC0.44□□□□□ -2.34
Ccdc40Q8BI79 Gm24204-201ENSMUST00000082950 107 ntBASIC0.44□□□□□ -2.34
Ccdc40Q8BI79 Gm22786-201ENSMUST00000104086 122 ntBASIC0.43□□□□□ -2.34
Ccdc40Q8BI79 Gm14884-201ENSMUST00000120456 196 ntBASIC0.43□□□□□ -2.34
Ccdc40Q8BI79 Gm26479-201ENSMUST00000122620 106 ntBASIC0.43□□□□□ -2.34
Ccdc40Q8BI79 Gm16307-201ENSMUST00000161269 210 ntBASIC0.43□□□□□ -2.34
Ccdc40Q8BI79 Gm8219-201ENSMUST00000218309 242 ntBASIC0.43□□□□□ -2.34
Ccdc40Q8BI79 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.43□□□□□ -2.34
Ccdc40Q8BI79 Mir410-201ENSMUST00000083563 81 ntBASIC0.43□□□□□ -2.34
Ccdc40Q8BI79 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
Ccdc40Q8BI79 Gm22469-201ENSMUST00000104118 133 ntBASIC0.42□□□□□ -2.34
Ccdc40Q8BI79 Gm22673-201ENSMUST00000104415 131 ntBASIC0.42□□□□□ -2.34
Ccdc40Q8BI79 Gm27723-201ENSMUST00000157398 63 ntBASIC0.42□□□□□ -2.34
Ccdc40Q8BI79 Gm26090-201ENSMUST00000157897 128 ntBASIC0.42□□□□□ -2.34
Ccdc40Q8BI79 Gm22163-201ENSMUST00000158408 135 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 319.2 ms