Protein–RNA interactions for Protein: Q6VGS5

Ccdc88c, Protein Daple, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88cQ6VGS5 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC0.92□□□□□ -2.26
Ccdc88cQ6VGS5 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC0.91□□□□□ -2.26
Ccdc88cQ6VGS5 Gm24121-201ENSMUST00000102029 106 ntBASIC0.91□□□□□ -2.26
Ccdc88cQ6VGS5 Gm28020-201ENSMUST00000157739 67 ntBASIC0.91□□□□□ -2.26
Ccdc88cQ6VGS5 Gm23852-201ENSMUST00000158376 77 ntBASIC0.91□□□□□ -2.26
Ccdc88cQ6VGS5 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
Ccdc88cQ6VGS5 AC157476.1-201ENSMUST00000215555 169 ntBASIC0.91□□□□□ -2.26
Ccdc88cQ6VGS5 AC129202.1-201ENSMUST00000224895 526 ntBASIC0.91□□□□□ -2.26
Ccdc88cQ6VGS5 Gm25357-201ENSMUST00000082745 72 ntBASIC0.91□□□□□ -2.26
Ccdc88cQ6VGS5 Gm24204-201ENSMUST00000082950 107 ntBASIC0.91□□□□□ -2.26
Ccdc88cQ6VGS5 Gm24835-201ENSMUST00000116777 111 ntBASIC0.91□□□□□ -2.26
Ccdc88cQ6VGS5 Gm14674-201ENSMUST00000117816 342 ntBASIC0.91□□□□□ -2.26
Ccdc88cQ6VGS5 Gm22883-201ENSMUST00000157376 106 ntBASIC0.91□□□□□ -2.26
Ccdc88cQ6VGS5 Gm25035-201ENSMUST00000175414 77 ntBASIC0.91□□□□□ -2.26
Ccdc88cQ6VGS5 Gm44352-201ENSMUST00000196358 110 ntBASIC0.91□□□□□ -2.26
Ccdc88cQ6VGS5 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC0.91□□□□□ -2.26
Ccdc88cQ6VGS5 Gm44301-201ENSMUST00000200362 143 ntBASIC0.91□□□□□ -2.26
Ccdc88cQ6VGS5 Gm23141-201ENSMUST00000178682 94 ntBASIC0.9□□□□□ -2.27
Ccdc88cQ6VGS5 Gm22951-201ENSMUST00000179471 107 ntBASIC0.9□□□□□ -2.27
Ccdc88cQ6VGS5 Gm44491-201ENSMUST00000196794 96 ntBASIC0.9□□□□□ -2.27
Ccdc88cQ6VGS5 Mir6375-201ENSMUST00000197176 95 ntBASIC0.9□□□□□ -2.27
Ccdc88cQ6VGS5 AC165293.1-201ENSMUST00000219669 329 ntBASIC0.9□□□□□ -2.27
Ccdc88cQ6VGS5 Gm18795-202ENSMUST00000223373 2920 ntBASIC0.9□□□□□ -2.27
Ccdc88cQ6VGS5 Gm43484-201ENSMUST00000198333 5966 ntBASIC0.9□□□□□ -2.27
Ccdc88cQ6VGS5 Gm24579-201ENSMUST00000103964 144 ntBASIC0.89□□□□□ -2.27
Ccdc88cQ6VGS5 Gm23492-201ENSMUST00000116837 115 ntBASIC0.89□□□□□ -2.27
Ccdc88cQ6VGS5 Gm22433-201ENSMUST00000158550 142 ntBASIC0.89□□□□□ -2.27
Ccdc88cQ6VGS5 Gm17052-201ENSMUST00000165496 289 ntBASIC0.89□□□□□ -2.27
Ccdc88cQ6VGS5 Gm27402-201ENSMUST00000183890 120 ntBASIC0.89□□□□□ -2.27
Ccdc88cQ6VGS5 Gm37089-201ENSMUST00000195616 129 ntBASIC0.89□□□□□ -2.27
Ccdc88cQ6VGS5 Gm44384-201ENSMUST00000200208 114 ntBASIC0.89□□□□□ -2.27
Ccdc88cQ6VGS5 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
Ccdc88cQ6VGS5 Gm45508-201ENSMUST00000209298 299 ntBASIC0.89□□□□□ -2.27
Ccdc88cQ6VGS5 Gm19855-201ENSMUST00000210145 249 ntBASIC0.89□□□□□ -2.27
Ccdc88cQ6VGS5 Snora3-201ENSMUST00000083082 132 ntBASIC0.89□□□□□ -2.27
Ccdc88cQ6VGS5 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
Ccdc88cQ6VGS5 Gm10730-201ENSMUST00000194097 2723 ntBASIC0.89□□□□□ -2.27
Ccdc88cQ6VGS5 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
Ccdc88cQ6VGS5 Gm22784-201ENSMUST00000104088 132 ntBASIC0.89□□□□□ -2.27
Ccdc88cQ6VGS5 Gm25720-201ENSMUST00000157503 105 ntBASIC0.89□□□□□ -2.27
Ccdc88cQ6VGS5 Gm27585-201ENSMUST00000183717 199 ntBASIC0.89□□□□□ -2.27
Ccdc88cQ6VGS5 Gm29022-201ENSMUST00000190702 225 ntBASIC0.89□□□□□ -2.27
Ccdc88cQ6VGS5 Gm44563-201ENSMUST00000207958 178 ntBASIC0.89□□□□□ -2.27
Ccdc88cQ6VGS5 AC154636.2-201ENSMUST00000222538 161 ntBASIC0.89□□□□□ -2.27
Ccdc88cQ6VGS5 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.89□□□□□ -2.27
Ccdc88cQ6VGS5 Gm23991-201ENSMUST00000117033 93 ntBASIC0.88□□□□□ -2.27
Ccdc88cQ6VGS5 Gm13560-201ENSMUST00000121865 329 ntBASIC0.88□□□□□ -2.27
Ccdc88cQ6VGS5 Gm25184-201ENSMUST00000157753 163 ntBASIC0.88□□□□□ -2.27
Ccdc88cQ6VGS5 Gm24851-201ENSMUST00000158028 103 ntBASIC0.88□□□□□ -2.27
Ccdc88cQ6VGS5 Gm23892-201ENSMUST00000158105 130 ntBASIC0.88□□□□□ -2.27
Ccdc88cQ6VGS5 Gm24006-201ENSMUST00000158462 132 ntBASIC0.88□□□□□ -2.27
Ccdc88cQ6VGS5 Gm23571-201ENSMUST00000180073 127 ntBASIC0.88□□□□□ -2.27
Ccdc88cQ6VGS5 Gm23370-201ENSMUST00000199545 130 ntBASIC0.88□□□□□ -2.27
Ccdc88cQ6VGS5 Snora19-201ENSMUST00000082962 132 ntBASIC0.88□□□□□ -2.27
Ccdc88cQ6VGS5 Gm23658-201ENSMUST00000083233 132 ntBASIC0.88□□□□□ -2.27
Ccdc88cQ6VGS5 Mir221-201ENSMUST00000083488 95 ntBASIC0.88□□□□□ -2.27
Ccdc88cQ6VGS5 Snord19-201ENSMUST00000104609 76 ntBASIC0.88□□□□□ -2.27
Ccdc88cQ6VGS5 Gm23208-201ENSMUST00000158666 127 ntBASIC0.88□□□□□ -2.27
Ccdc88cQ6VGS5 Gm23419-201ENSMUST00000175523 84 ntBASIC0.88□□□□□ -2.27
Ccdc88cQ6VGS5 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
Ccdc88cQ6VGS5 Mir7116-201ENSMUST00000195956 70 ntBASIC0.88□□□□□ -2.27
Ccdc88cQ6VGS5 AC154390.1-201ENSMUST00000225629 277 ntBASIC0.88□□□□□ -2.27
Ccdc88cQ6VGS5 Gm22421-201ENSMUST00000083058 107 ntBASIC0.88□□□□□ -2.27
Ccdc88cQ6VGS5 Gm25683-201ENSMUST00000083940 131 ntBASIC0.88□□□□□ -2.27
Ccdc88cQ6VGS5 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC0.87□□□□□ -2.27
Ccdc88cQ6VGS5 Gm11204-201ENSMUST00000122438 147 ntBASIC0.87□□□□□ -2.27
Ccdc88cQ6VGS5 Mir1904-201ENSMUST00000122702 80 ntBASIC0.87□□□□□ -2.27
Ccdc88cQ6VGS5 Gm23584-201ENSMUST00000157655 129 ntBASIC0.87□□□□□ -2.27
Ccdc88cQ6VGS5 Gm23783-201ENSMUST00000157941 102 ntBASIC0.87□□□□□ -2.27
Ccdc88cQ6VGS5 Gm25333-201ENSMUST00000158035 246 ntBASIC0.87□□□□□ -2.27
Ccdc88cQ6VGS5 Mir7683-201ENSMUST00000183842 61 ntBASIC0.87□□□□□ -2.27
Ccdc88cQ6VGS5 Gm27421-201ENSMUST00000184729 167 ntBASIC0.87□□□□□ -2.27
Ccdc88cQ6VGS5 Gm37624-201ENSMUST00000193751 219 ntBASIC0.87□□□□□ -2.27
Ccdc88cQ6VGS5 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC0.87□□□□□ -2.27
Ccdc88cQ6VGS5 Gm43563-201ENSMUST00000196761 198 ntBASIC0.87□□□□□ -2.27
Ccdc88cQ6VGS5 Gm36189-201ENSMUST00000204113 523 ntBASIC0.87□□□□□ -2.27
Ccdc88cQ6VGS5 Gm25204-201ENSMUST00000082843 106 ntBASIC0.87□□□□□ -2.27
Ccdc88cQ6VGS5 Mir541-201ENSMUST00000102097 90 ntBASIC0.86□□□□□ -2.27
Ccdc88cQ6VGS5 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
Ccdc88cQ6VGS5 Gm15069-201ENSMUST00000117792 192 ntBASIC0.86□□□□□ -2.27
Ccdc88cQ6VGS5 Gm15068-201ENSMUST00000119796 192 ntBASIC0.86□□□□□ -2.27
Ccdc88cQ6VGS5 Gm22565-201ENSMUST00000175540 69 ntBASIC0.86□□□□□ -2.27
Ccdc88cQ6VGS5 Gm22258-201ENSMUST00000177645 94 ntBASIC0.86□□□□□ -2.27
Ccdc88cQ6VGS5 Gm26032-201ENSMUST00000178535 94 ntBASIC0.86□□□□□ -2.27
Ccdc88cQ6VGS5 Gm25210-201ENSMUST00000178813 94 ntBASIC0.86□□□□□ -2.27
Ccdc88cQ6VGS5 Gm25157-201ENSMUST00000178914 94 ntBASIC0.86□□□□□ -2.27
Ccdc88cQ6VGS5 Gm22046-201ENSMUST00000179027 94 ntBASIC0.86□□□□□ -2.27
Ccdc88cQ6VGS5 Gm22941-201ENSMUST00000179630 94 ntBASIC0.86□□□□□ -2.27
Ccdc88cQ6VGS5 Gm25471-201ENSMUST00000180126 94 ntBASIC0.86□□□□□ -2.27
Ccdc88cQ6VGS5 Gm29613-201ENSMUST00000185846 313 ntBASIC0.86□□□□□ -2.27
Ccdc88cQ6VGS5 Gm29544-201ENSMUST00000188860 313 ntBASIC0.86□□□□□ -2.27
Ccdc88cQ6VGS5 Gm28808-201ENSMUST00000190978 313 ntBASIC0.86□□□□□ -2.27
Ccdc88cQ6VGS5 Gm24522-201ENSMUST00000083964 108 ntBASIC0.86□□□□□ -2.27
Ccdc88cQ6VGS5 Gm25787-201ENSMUST00000104709 92 ntBASIC0.86□□□□□ -2.27
Ccdc88cQ6VGS5 Gm24595-201ENSMUST00000122501 110 ntBASIC0.86□□□□□ -2.27
Ccdc88cQ6VGS5 Gm25783-201ENSMUST00000122525 190 ntBASIC0.86□□□□□ -2.27
Ccdc88cQ6VGS5 Gm23656-201ENSMUST00000122626 112 ntBASIC0.86□□□□□ -2.27
Ccdc88cQ6VGS5 Gm23277-201ENSMUST00000157914 136 ntBASIC0.86□□□□□ -2.27
Ccdc88cQ6VGS5 Gm25024-201ENSMUST00000179667 104 ntBASIC0.86□□□□□ -2.27
Ccdc88cQ6VGS5 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 152.1 ms