Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gm42855-201ENSMUST00000197388 253 ntBASIC1.61□□□□□ -2.15
Smarca1Q6PGB8 Gm36189-201ENSMUST00000204113 523 ntBASIC1.61□□□□□ -2.15
Smarca1Q6PGB8 Snord1a-201ENSMUST00000083160 74 ntBASIC1.61□□□□□ -2.15
Smarca1Q6PGB8 Gm22051-201ENSMUST00000117002 127 ntBASIC1.6□□□□□ -2.15
Smarca1Q6PGB8 Gm26026-201ENSMUST00000122726 123 ntBASIC1.6□□□□□ -2.15
Smarca1Q6PGB8 Gm22586-201ENSMUST00000157507 122 ntBASIC1.6□□□□□ -2.15
Smarca1Q6PGB8 Gm23122-201ENSMUST00000157645 103 ntBASIC1.6□□□□□ -2.15
Smarca1Q6PGB8 Gm23558-201ENSMUST00000157823 80 ntBASIC1.6□□□□□ -2.15
Smarca1Q6PGB8 Gm22164-201ENSMUST00000158413 106 ntBASIC1.6□□□□□ -2.15
Smarca1Q6PGB8 Gm22403-201ENSMUST00000174919 84 ntBASIC1.6□□□□□ -2.15
Smarca1Q6PGB8 Gm22929-201ENSMUST00000175517 107 ntBASIC1.6□□□□□ -2.15
Smarca1Q6PGB8 Mir6962-201ENSMUST00000199512 63 ntBASIC1.6□□□□□ -2.15
Smarca1Q6PGB8 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.6□□□□□ -2.15
Smarca1Q6PGB8 AC160984.1-201ENSMUST00000225855 3154 ntBASIC1.59□□□□□ -2.15
Smarca1Q6PGB8 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Smarca1Q6PGB8 Gm24121-201ENSMUST00000102029 106 ntBASIC1.59□□□□□ -2.15
Smarca1Q6PGB8 Mir466b-8-201ENSMUST00000103883 86 ntBASIC1.59□□□□□ -2.15
Smarca1Q6PGB8 Gm12449-201ENSMUST00000117572 234 ntBASIC1.59□□□□□ -2.15
Smarca1Q6PGB8 Gm12815-201ENSMUST00000121737 135 ntBASIC1.59□□□□□ -2.15
Smarca1Q6PGB8 Gm22963-201ENSMUST00000157960 91 ntBASIC1.59□□□□□ -2.15
Smarca1Q6PGB8 Gm25749-201ENSMUST00000175485 111 ntBASIC1.59□□□□□ -2.15
Smarca1Q6PGB8 Gm20630-201ENSMUST00000177387 551 ntBASIC1.59□□□□□ -2.15
Smarca1Q6PGB8 Gm27265-201ENSMUST00000183559 77 ntBASIC1.59□□□□□ -2.15
Smarca1Q6PGB8 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Smarca1Q6PGB8 Mir466e-201ENSMUST00000198862 84 ntBASIC1.59□□□□□ -2.15
Smarca1Q6PGB8 Mir466c-1-201ENSMUST00000200654 84 ntBASIC1.59□□□□□ -2.15
Smarca1Q6PGB8 Gm22884-201ENSMUST00000083127 140 ntBASIC1.59□□□□□ -2.15
Smarca1Q6PGB8 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
Smarca1Q6PGB8 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
Smarca1Q6PGB8 Gm6897-201ENSMUST00000117714 138 ntBASIC1.58□□□□□ -2.16
Smarca1Q6PGB8 Gm14758-201ENSMUST00000119104 138 ntBASIC1.58□□□□□ -2.16
Smarca1Q6PGB8 Gm24895-201ENSMUST00000122742 74 ntBASIC1.58□□□□□ -2.16
Smarca1Q6PGB8 Gm22145-201ENSMUST00000157396 148 ntBASIC1.58□□□□□ -2.16
Smarca1Q6PGB8 Gm25184-201ENSMUST00000157753 163 ntBASIC1.58□□□□□ -2.16
Smarca1Q6PGB8 Gm22433-201ENSMUST00000158550 142 ntBASIC1.58□□□□□ -2.16
Smarca1Q6PGB8 Mir669k-201ENSMUST00000177742 127 ntBASIC1.58□□□□□ -2.16
Smarca1Q6PGB8 Gm25673-201ENSMUST00000179957 127 ntBASIC1.58□□□□□ -2.16
Smarca1Q6PGB8 Gm27894-201ENSMUST00000184177 92 ntBASIC1.58□□□□□ -2.16
Smarca1Q6PGB8 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.58□□□□□ -2.16
Smarca1Q6PGB8 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Smarca1Q6PGB8 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Smarca1Q6PGB8 Gm26092-201ENSMUST00000179798 97 ntBASIC1.57□□□□□ -2.16
Smarca1Q6PGB8 Mir669a-1-201ENSMUST00000180238 97 ntBASIC1.57□□□□□ -2.16
Smarca1Q6PGB8 Gm21064-202ENSMUST00000190583 278 ntBASIC1.57□□□□□ -2.16
Smarca1Q6PGB8 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.57□□□□□ -2.16
Smarca1Q6PGB8 Gm24494-201ENSMUST00000083804 81 ntBASIC1.57□□□□□ -2.16
Smarca1Q6PGB8 Gm25759-201ENSMUST00000103988 129 ntBASIC1.56□□□□□ -2.16
Smarca1Q6PGB8 Gm24835-201ENSMUST00000116777 111 ntBASIC1.56□□□□□ -2.16
Smarca1Q6PGB8 Gm24385-201ENSMUST00000122694 350 ntBASIC1.56□□□□□ -2.16
Smarca1Q6PGB8 Gm26049-201ENSMUST00000157313 108 ntBASIC1.56□□□□□ -2.16
Smarca1Q6PGB8 Gm22888-201ENSMUST00000158640 77 ntBASIC1.56□□□□□ -2.16
Smarca1Q6PGB8 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC1.56□□□□□ -2.16
Smarca1Q6PGB8 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.56□□□□□ -2.16
Smarca1Q6PGB8 Gm14923-201ENSMUST00000118270 155 ntBASIC1.55□□□□□ -2.16
Smarca1Q6PGB8 Gm14837-201ENSMUST00000119688 206 ntBASIC1.55□□□□□ -2.16
Smarca1Q6PGB8 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Smarca1Q6PGB8 Gm24915-201ENSMUST00000157288 78 ntBASIC1.55□□□□□ -2.16
Smarca1Q6PGB8 Gm23996-201ENSMUST00000158062 131 ntBASIC1.55□□□□□ -2.16
Smarca1Q6PGB8 Gm27579-201ENSMUST00000158113 63 ntBASIC1.55□□□□□ -2.16
Smarca1Q6PGB8 Gm22258-201ENSMUST00000177645 94 ntBASIC1.55□□□□□ -2.16
Smarca1Q6PGB8 Gm26032-201ENSMUST00000178535 94 ntBASIC1.55□□□□□ -2.16
Smarca1Q6PGB8 Gm25210-201ENSMUST00000178813 94 ntBASIC1.55□□□□□ -2.16
Smarca1Q6PGB8 Gm25157-201ENSMUST00000178914 94 ntBASIC1.55□□□□□ -2.16
Smarca1Q6PGB8 Gm22046-201ENSMUST00000179027 94 ntBASIC1.55□□□□□ -2.16
Smarca1Q6PGB8 Gm22941-201ENSMUST00000179630 94 ntBASIC1.55□□□□□ -2.16
Smarca1Q6PGB8 Gm25471-201ENSMUST00000180126 94 ntBASIC1.55□□□□□ -2.16
Smarca1Q6PGB8 Mir8119-201ENSMUST00000183371 129 ntBASIC1.55□□□□□ -2.16
Smarca1Q6PGB8 Gm27585-201ENSMUST00000183717 199 ntBASIC1.55□□□□□ -2.16
Smarca1Q6PGB8 Gm27493-201ENSMUST00000184128 78 ntBASIC1.55□□□□□ -2.16
Smarca1Q6PGB8 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.55□□□□□ -2.16
Smarca1Q6PGB8 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
Smarca1Q6PGB8 Gm16976-205ENSMUST00000227324 226 ntBASIC1.55□□□□□ -2.16
Smarca1Q6PGB8 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Smarca1Q6PGB8 Gm24523-201ENSMUST00000083965 132 ntBASIC1.55□□□□□ -2.16
Smarca1Q6PGB8 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.55□□□□□ -2.16
Smarca1Q6PGB8 Gm11856-201ENSMUST00000118712 276 ntBASIC1.54□□□□□ -2.16
Smarca1Q6PGB8 Gm12432-201ENSMUST00000119540 186 ntBASIC1.54□□□□□ -2.16
Smarca1Q6PGB8 Mir6240-201ENSMUST00000184281 117 ntBASIC1.54□□□□□ -2.16
Smarca1Q6PGB8 Gm44326-201ENSMUST00000198226 101 ntBASIC1.54□□□□□ -2.16
Smarca1Q6PGB8 Gm45508-201ENSMUST00000209298 299 ntBASIC1.54□□□□□ -2.16
Smarca1Q6PGB8 Mir384-201ENSMUST00000083565 88 ntBASIC1.54□□□□□ -2.16
Smarca1Q6PGB8 Gm22673-201ENSMUST00000104415 131 ntBASIC1.53□□□□□ -2.16
Smarca1Q6PGB8 Gm22477-201ENSMUST00000122569 316 ntBASIC1.53□□□□□ -2.16
Smarca1Q6PGB8 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.53□□□□□ -2.16
Smarca1Q6PGB8 Traj60-201ENSMUST00000167781 54 ntBASIC1.53□□□□□ -2.16
Smarca1Q6PGB8 Mir3098-201ENSMUST00000175416 87 ntBASIC1.53□□□□□ -2.16
Smarca1Q6PGB8 Gm28669-201ENSMUST00000188400 100 ntBASIC1.53□□□□□ -2.16
Smarca1Q6PGB8 CT033781.2-201ENSMUST00000221113 153 ntBASIC1.53□□□□□ -2.16
Smarca1Q6PGB8 Snord96a-201ENSMUST00000082791 81 ntBASIC1.53□□□□□ -2.16
Smarca1Q6PGB8 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Smarca1Q6PGB8 Gm22785-201ENSMUST00000104087 132 ntBASIC1.52□□□□□ -2.17
Smarca1Q6PGB8 Snord89-201ENSMUST00000104516 110 ntBASIC1.52□□□□□ -2.17
Smarca1Q6PGB8 Gm25783-201ENSMUST00000122525 190 ntBASIC1.52□□□□□ -2.17
Smarca1Q6PGB8 Gm26213-201ENSMUST00000158582 110 ntBASIC1.52□□□□□ -2.17
Smarca1Q6PGB8 Gm27402-201ENSMUST00000183890 120 ntBASIC1.52□□□□□ -2.17
Smarca1Q6PGB8 Mir7059-201ENSMUST00000184825 59 ntBASIC1.52□□□□□ -2.17
Smarca1Q6PGB8 Gm29603-201ENSMUST00000186792 334 ntBASIC1.52□□□□□ -2.17
Smarca1Q6PGB8 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.52□□□□□ -2.17
Smarca1Q6PGB8 Gm22744-201ENSMUST00000083444 65 ntBASIC1.52□□□□□ -2.17
Smarca1Q6PGB8 Mir146-201ENSMUST00000083667 65 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 156.9 ms