Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Snrnp40Q6PE01 Gm26339-201ENSMUST00000102368 99 ntBASIC1.38□□□□□ -2.19
Snrnp40Q6PE01 Gm25316-201ENSMUST00000116826 118 ntBASIC1.38□□□□□ -2.19
Snrnp40Q6PE01 Gm24640-201ENSMUST00000116949 126 ntBASIC1.38□□□□□ -2.19
Snrnp40Q6PE01 Gm22626-201ENSMUST00000116990 126 ntBASIC1.38□□□□□ -2.19
Snrnp40Q6PE01 Gm22279-201ENSMUST00000157200 93 ntBASIC1.38□□□□□ -2.19
Snrnp40Q6PE01 Gm23718-201ENSMUST00000157350 307 ntBASIC1.38□□□□□ -2.19
Snrnp40Q6PE01 Gm23901-201ENSMUST00000157570 107 ntBASIC1.38□□□□□ -2.19
Snrnp40Q6PE01 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.38□□□□□ -2.19
Snrnp40Q6PE01 Gm24761-201ENSMUST00000179589 127 ntBASIC1.38□□□□□ -2.19
Snrnp40Q6PE01 Gm24488-201ENSMUST00000179934 127 ntBASIC1.38□□□□□ -2.19
Snrnp40Q6PE01 Gm25701-201ENSMUST00000179988 127 ntBASIC1.38□□□□□ -2.19
Snrnp40Q6PE01 Gm26431-201ENSMUST00000180199 127 ntBASIC1.38□□□□□ -2.19
Snrnp40Q6PE01 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.38□□□□□ -2.19
Snrnp40Q6PE01 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.38□□□□□ -2.19
Snrnp40Q6PE01 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.38□□□□□ -2.19
Snrnp40Q6PE01 Gm25634-201ENSMUST00000082667 105 ntBASIC1.38□□□□□ -2.19
Snrnp40Q6PE01 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Snrnp40Q6PE01 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.37□□□□□ -2.19
Snrnp40Q6PE01 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.37□□□□□ -2.19
Snrnp40Q6PE01 Gm25943-201ENSMUST00000103791 90 ntBASIC1.37□□□□□ -2.19
Snrnp40Q6PE01 Mir466b-7-201ENSMUST00000103804 88 ntBASIC1.37□□□□□ -2.19
Snrnp40Q6PE01 Mir466b-5-201ENSMUST00000103900 88 ntBASIC1.37□□□□□ -2.19
Snrnp40Q6PE01 Gm12432-201ENSMUST00000119540 186 ntBASIC1.37□□□□□ -2.19
Snrnp40Q6PE01 Gm13560-201ENSMUST00000121865 329 ntBASIC1.37□□□□□ -2.19
Snrnp40Q6PE01 Gm25783-201ENSMUST00000122525 190 ntBASIC1.37□□□□□ -2.19
Snrnp40Q6PE01 Gm22603-201ENSMUST00000157603 96 ntBASIC1.37□□□□□ -2.19
Snrnp40Q6PE01 Gm22553-201ENSMUST00000157797 295 ntBASIC1.37□□□□□ -2.19
Snrnp40Q6PE01 Gm26038-201ENSMUST00000158151 106 ntBASIC1.37□□□□□ -2.19
Snrnp40Q6PE01 Mir466b-4-201ENSMUST00000178801 90 ntBASIC1.37□□□□□ -2.19
Snrnp40Q6PE01 Gm25285-201ENSMUST00000178951 90 ntBASIC1.37□□□□□ -2.19
Snrnp40Q6PE01 Mir466b-6-201ENSMUST00000180061 90 ntBASIC1.37□□□□□ -2.19
Snrnp40Q6PE01 Mir466c-2-201ENSMUST00000180211 90 ntBASIC1.37□□□□□ -2.19
Snrnp40Q6PE01 Gm27476-201ENSMUST00000183366 104 ntBASIC1.37□□□□□ -2.19
Snrnp40Q6PE01 Gm28344-201ENSMUST00000185704 279 ntBASIC1.37□□□□□ -2.19
Snrnp40Q6PE01 Gm37746-201ENSMUST00000193249 198 ntBASIC1.37□□□□□ -2.19
Snrnp40Q6PE01 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.37□□□□□ -2.19
Snrnp40Q6PE01 Mir384-201ENSMUST00000083565 88 ntBASIC1.37□□□□□ -2.19
Snrnp40Q6PE01 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Snrnp40Q6PE01 Gm25274-201ENSMUST00000104296 135 ntBASIC1.36□□□□□ -2.19
Snrnp40Q6PE01 Snord19-201ENSMUST00000104609 76 ntBASIC1.36□□□□□ -2.19
Snrnp40Q6PE01 Gm14536-201ENSMUST00000118324 138 ntBASIC1.36□□□□□ -2.19
Snrnp40Q6PE01 Gm13801-201ENSMUST00000120750 160 ntBASIC1.36□□□□□ -2.19
Snrnp40Q6PE01 Gm15027-201ENSMUST00000120922 138 ntBASIC1.36□□□□□ -2.19
Snrnp40Q6PE01 Gm25825-201ENSMUST00000157091 124 ntBASIC1.36□□□□□ -2.19
Snrnp40Q6PE01 Gm23558-201ENSMUST00000157823 80 ntBASIC1.36□□□□□ -2.19
Snrnp40Q6PE01 Gm23545-201ENSMUST00000158205 104 ntBASIC1.36□□□□□ -2.19
Snrnp40Q6PE01 Gm23194-201ENSMUST00000158813 105 ntBASIC1.36□□□□□ -2.19
Snrnp40Q6PE01 Gm38183-201ENSMUST00000193189 205 ntBASIC1.36□□□□□ -2.19
Snrnp40Q6PE01 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.36□□□□□ -2.19
Snrnp40Q6PE01 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.36□□□□□ -2.19
Snrnp40Q6PE01 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.36□□□□□ -2.19
Snrnp40Q6PE01 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
Snrnp40Q6PE01 Mir343-201ENSMUST00000102360 75 ntBASIC1.35□□□□□ -2.19
Snrnp40Q6PE01 Mir544-201ENSMUST00000103813 78 ntBASIC1.35□□□□□ -2.19
Snrnp40Q6PE01 Mir466p-201ENSMUST00000103925 89 ntBASIC1.35□□□□□ -2.19
Snrnp40Q6PE01 Snord89-201ENSMUST00000104516 110 ntBASIC1.35□□□□□ -2.19
Snrnp40Q6PE01 Gm25565-201ENSMUST00000104605 105 ntBASIC1.35□□□□□ -2.19
Snrnp40Q6PE01 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC1.35□□□□□ -2.19
Snrnp40Q6PE01 Gm23655-201ENSMUST00000122627 105 ntBASIC1.35□□□□□ -2.19
Snrnp40Q6PE01 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.35□□□□□ -2.19
Snrnp40Q6PE01 Gm26049-201ENSMUST00000157313 108 ntBASIC1.35□□□□□ -2.19
Snrnp40Q6PE01 Gm24634-201ENSMUST00000158672 107 ntBASIC1.35□□□□□ -2.19
Snrnp40Q6PE01 Mir3098-201ENSMUST00000175416 87 ntBASIC1.35□□□□□ -2.19
Snrnp40Q6PE01 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
Snrnp40Q6PE01 Gm25410-201ENSMUST00000083758 137 ntBASIC1.35□□□□□ -2.19
Snrnp40Q6PE01 Gm26293-201ENSMUST00000104170 84 ntBASIC1.34□□□□□ -2.19
Snrnp40Q6PE01 Gm23907-201ENSMUST00000104595 189 ntBASIC1.34□□□□□ -2.19
Snrnp40Q6PE01 Gm22386-201ENSMUST00000158192 129 ntBASIC1.34□□□□□ -2.19
Snrnp40Q6PE01 Mir669k-201ENSMUST00000177742 127 ntBASIC1.34□□□□□ -2.19
Snrnp40Q6PE01 Gm22259-201ENSMUST00000178926 107 ntBASIC1.34□□□□□ -2.19
Snrnp40Q6PE01 Gm25673-201ENSMUST00000179957 127 ntBASIC1.34□□□□□ -2.19
Snrnp40Q6PE01 Mir7675-201ENSMUST00000184262 58 ntBASIC1.34□□□□□ -2.19
Snrnp40Q6PE01 Mir7059-201ENSMUST00000184825 59 ntBASIC1.34□□□□□ -2.19
Snrnp40Q6PE01 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.34□□□□□ -2.19
Snrnp40Q6PE01 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC1.34□□□□□ -2.19
Snrnp40Q6PE01 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.33□□□□□ -2.2
Snrnp40Q6PE01 Gm24867-201ENSMUST00000104161 107 ntBASIC1.33□□□□□ -2.2
Snrnp40Q6PE01 Gm24375-201ENSMUST00000104397 132 ntBASIC1.33□□□□□ -2.2
Snrnp40Q6PE01 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.33□□□□□ -2.2
Snrnp40Q6PE01 Gm24915-201ENSMUST00000157288 78 ntBASIC1.33□□□□□ -2.2
Snrnp40Q6PE01 Gm22767-201ENSMUST00000158365 165 ntBASIC1.33□□□□□ -2.2
Snrnp40Q6PE01 Gm25069-201ENSMUST00000175238 86 ntBASIC1.33□□□□□ -2.2
Snrnp40Q6PE01 Gm24154-201ENSMUST00000175261 130 ntBASIC1.33□□□□□ -2.2
Snrnp40Q6PE01 Gm25935-201ENSMUST00000178746 107 ntBASIC1.33□□□□□ -2.2
Snrnp40Q6PE01 Gm27493-201ENSMUST00000184128 78 ntBASIC1.33□□□□□ -2.2
Snrnp40Q6PE01 Gm21064-202ENSMUST00000190583 278 ntBASIC1.33□□□□□ -2.2
Snrnp40Q6PE01 Gm44052-201ENSMUST00000203382 396 ntBASIC1.33□□□□□ -2.2
Snrnp40Q6PE01 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.32□□□□□ -2.2
Snrnp40Q6PE01 Gm25759-201ENSMUST00000103988 129 ntBASIC1.32□□□□□ -2.2
Snrnp40Q6PE01 Mir466h-201ENSMUST00000104748 81 ntBASIC1.32□□□□□ -2.2
Snrnp40Q6PE01 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Snrnp40Q6PE01 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.32□□□□□ -2.2
Snrnp40Q6PE01 Gm23113-201ENSMUST00000158477 99 ntBASIC1.32□□□□□ -2.2
Snrnp40Q6PE01 Gm25976-201ENSMUST00000158695 130 ntBASIC1.32□□□□□ -2.2
Snrnp40Q6PE01 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.32□□□□□ -2.2
Snrnp40Q6PE01 Gm27668-201ENSMUST00000184188 120 ntBASIC1.32□□□□□ -2.2
Snrnp40Q6PE01 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Snrnp40Q6PE01 Mir7052-201ENSMUST00000184821 65 ntBASIC1.32□□□□□ -2.2
Snrnp40Q6PE01 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC1.32□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 217.8 ms