Protein–RNA interactions for Protein: Q6PDM4

Ccdc36, Interactor of HORMAD1 protein 1, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc36Q6PDM4 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Ccdc36Q6PDM4 Gm6003-201ENSMUST00000187903 463 ntBASIC1.18□□□□□ -2.22
Ccdc36Q6PDM4 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
Ccdc36Q6PDM4 Mir3087-201ENSMUST00000199405 56 ntBASIC1.18□□□□□ -2.22
Ccdc36Q6PDM4 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Ccdc36Q6PDM4 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Ccdc36Q6PDM4 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Ccdc36Q6PDM4 Gm25495-201ENSMUST00000104431 131 ntBASIC1.17□□□□□ -2.22
Ccdc36Q6PDM4 Gm24132-201ENSMUST00000104745 91 ntBASIC1.17□□□□□ -2.22
Ccdc36Q6PDM4 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Ccdc36Q6PDM4 Gm14882-201ENSMUST00000117216 218 ntBASIC1.17□□□□□ -2.22
Ccdc36Q6PDM4 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC1.17□□□□□ -2.22
Ccdc36Q6PDM4 Gm13801-201ENSMUST00000120750 160 ntBASIC1.17□□□□□ -2.22
Ccdc36Q6PDM4 Gm25914-201ENSMUST00000157618 153 ntBASIC1.17□□□□□ -2.22
Ccdc36Q6PDM4 Gm23558-201ENSMUST00000157823 80 ntBASIC1.17□□□□□ -2.22
Ccdc36Q6PDM4 Gm25371-201ENSMUST00000158162 101 ntBASIC1.17□□□□□ -2.22
Ccdc36Q6PDM4 Gm24076-201ENSMUST00000158179 94 ntBASIC1.17□□□□□ -2.22
Ccdc36Q6PDM4 Gm24229-201ENSMUST00000158830 118 ntBASIC1.17□□□□□ -2.22
Ccdc36Q6PDM4 Gm9156-201ENSMUST00000189660 463 ntBASIC1.17□□□□□ -2.22
Ccdc36Q6PDM4 Gm37693-201ENSMUST00000194562 234 ntBASIC1.17□□□□□ -2.22
Ccdc36Q6PDM4 Gm46993-201ENSMUST00000220708 259 ntBASIC1.17□□□□□ -2.22
Ccdc36Q6PDM4 Mir320-201ENSMUST00000083594 82 ntBASIC1.17□□□□□ -2.22
Ccdc36Q6PDM4 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Ccdc36Q6PDM4 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.17□□□□□ -2.22
Ccdc36Q6PDM4 Gm25538-201ENSMUST00000101943 107 ntBASIC1.16□□□□□ -2.22
Ccdc36Q6PDM4 Gm12449-201ENSMUST00000117572 234 ntBASIC1.16□□□□□ -2.22
Ccdc36Q6PDM4 Gm22279-201ENSMUST00000157200 93 ntBASIC1.16□□□□□ -2.22
Ccdc36Q6PDM4 Gm24015-201ENSMUST00000157725 232 ntBASIC1.16□□□□□ -2.22
Ccdc36Q6PDM4 Gm22553-201ENSMUST00000157797 295 ntBASIC1.16□□□□□ -2.22
Ccdc36Q6PDM4 Gm22767-201ENSMUST00000158365 165 ntBASIC1.16□□□□□ -2.22
Ccdc36Q6PDM4 Gm23208-201ENSMUST00000158666 127 ntBASIC1.16□□□□□ -2.22
Ccdc36Q6PDM4 Traj60-201ENSMUST00000167781 54 ntBASIC1.16□□□□□ -2.22
Ccdc36Q6PDM4 Gm25935-201ENSMUST00000178746 107 ntBASIC1.16□□□□□ -2.22
Ccdc36Q6PDM4 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Ccdc36Q6PDM4 Gm25820-201ENSMUST00000198589 127 ntBASIC1.16□□□□□ -2.22
Ccdc36Q6PDM4 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.16□□□□□ -2.22
Ccdc36Q6PDM4 Gm25142-201ENSMUST00000082698 107 ntBASIC1.16□□□□□ -2.22
Ccdc36Q6PDM4 Snord82-201ENSMUST00000082889 70 ntBASIC1.16□□□□□ -2.22
Ccdc36Q6PDM4 Snord47-201ENSMUST00000083034 77 ntBASIC1.16□□□□□ -2.22
Ccdc36Q6PDM4 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.16□□□□□ -2.22
Ccdc36Q6PDM4 Gm27047-201ENSMUST00000183072 1819 ntBASIC1.15□□□□□ -2.22
Ccdc36Q6PDM4 Gm24865-201ENSMUST00000103246 96 ntBASIC1.15□□□□□ -2.23
Ccdc36Q6PDM4 Gm25068-201ENSMUST00000103895 110 ntBASIC1.15□□□□□ -2.23
Ccdc36Q6PDM4 Gm26293-201ENSMUST00000104170 84 ntBASIC1.15□□□□□ -2.23
Ccdc36Q6PDM4 Gm14536-201ENSMUST00000118324 138 ntBASIC1.15□□□□□ -2.23
Ccdc36Q6PDM4 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC1.15□□□□□ -2.23
Ccdc36Q6PDM4 Gm15027-201ENSMUST00000120922 138 ntBASIC1.15□□□□□ -2.23
Ccdc36Q6PDM4 Gm23656-201ENSMUST00000122626 112 ntBASIC1.15□□□□□ -2.23
Ccdc36Q6PDM4 Gm22586-201ENSMUST00000157507 122 ntBASIC1.15□□□□□ -2.23
Ccdc36Q6PDM4 Gm22551-201ENSMUST00000157795 103 ntBASIC1.15□□□□□ -2.23
Ccdc36Q6PDM4 Gm23665-201ENSMUST00000158054 62 ntBASIC1.15□□□□□ -2.23
Ccdc36Q6PDM4 Gm25958-201ENSMUST00000175114 71 ntBASIC1.15□□□□□ -2.23
Ccdc36Q6PDM4 Mir6481-201ENSMUST00000184617 110 ntBASIC1.15□□□□□ -2.23
Ccdc36Q6PDM4 Gm28912-201ENSMUST00000189001 234 ntBASIC1.15□□□□□ -2.23
Ccdc36Q6PDM4 Gm38183-201ENSMUST00000193189 205 ntBASIC1.15□□□□□ -2.23
Ccdc36Q6PDM4 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.15□□□□□ -2.23
Ccdc36Q6PDM4 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.15□□□□□ -2.23
Ccdc36Q6PDM4 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.15□□□□□ -2.23
Ccdc36Q6PDM4 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
Ccdc36Q6PDM4 Mir221-201ENSMUST00000083488 95 ntBASIC1.15□□□□□ -2.23
Ccdc36Q6PDM4 Gm25895-201ENSMUST00000083714 100 ntBASIC1.15□□□□□ -2.23
Ccdc36Q6PDM4 Mir471-201ENSMUST00000093596 67 ntBASIC1.15□□□□□ -2.23
Ccdc36Q6PDM4 Gm25832-201ENSMUST00000104140 130 ntBASIC1.14□□□□□ -2.23
Ccdc36Q6PDM4 Gm23907-201ENSMUST00000104595 189 ntBASIC1.14□□□□□ -2.23
Ccdc36Q6PDM4 Gm24683-201ENSMUST00000104840 88 ntBASIC1.14□□□□□ -2.23
Ccdc36Q6PDM4 Gm22337-201ENSMUST00000157721 132 ntBASIC1.14□□□□□ -2.23
Ccdc36Q6PDM4 Gm29613-201ENSMUST00000185846 313 ntBASIC1.14□□□□□ -2.23
Ccdc36Q6PDM4 Gm29544-201ENSMUST00000188860 313 ntBASIC1.14□□□□□ -2.23
Ccdc36Q6PDM4 Gm28808-201ENSMUST00000190978 313 ntBASIC1.14□□□□□ -2.23
Ccdc36Q6PDM4 Gm37624-201ENSMUST00000193751 219 ntBASIC1.14□□□□□ -2.23
Ccdc36Q6PDM4 Gm44483-201ENSMUST00000197203 97 ntBASIC1.14□□□□□ -2.23
Ccdc36Q6PDM4 Gm36189-201ENSMUST00000204113 523 ntBASIC1.14□□□□□ -2.23
Ccdc36Q6PDM4 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.14□□□□□ -2.23
Ccdc36Q6PDM4 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.14□□□□□ -2.23
Ccdc36Q6PDM4 Snord14a-201ENSMUST00000082807 87 ntBASIC1.14□□□□□ -2.23
Ccdc36Q6PDM4 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.13□□□□□ -2.23
Ccdc36Q6PDM4 Gm25825-201ENSMUST00000157091 124 ntBASIC1.13□□□□□ -2.23
Ccdc36Q6PDM4 Gm24915-201ENSMUST00000157288 78 ntBASIC1.13□□□□□ -2.23
Ccdc36Q6PDM4 Gm24750-201ENSMUST00000157843 104 ntBASIC1.13□□□□□ -2.23
Ccdc36Q6PDM4 Gm22944-201ENSMUST00000158662 133 ntBASIC1.13□□□□□ -2.23
Ccdc36Q6PDM4 Gm22663-201ENSMUST00000158721 102 ntBASIC1.13□□□□□ -2.23
Ccdc36Q6PDM4 Gm23370-201ENSMUST00000199545 130 ntBASIC1.13□□□□□ -2.23
Ccdc36Q6PDM4 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.13□□□□□ -2.23
Ccdc36Q6PDM4 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
Ccdc36Q6PDM4 Gm26080-201ENSMUST00000104069 131 ntBASIC1.12□□□□□ -2.23
Ccdc36Q6PDM4 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.12□□□□□ -2.23
Ccdc36Q6PDM4 Gm23122-201ENSMUST00000157645 103 ntBASIC1.12□□□□□ -2.23
Ccdc36Q6PDM4 Gm25884-201ENSMUST00000157782 62 ntBASIC1.12□□□□□ -2.23
Ccdc36Q6PDM4 Gm25223-201ENSMUST00000158200 110 ntBASIC1.12□□□□□ -2.23
Ccdc36Q6PDM4 Gm22164-201ENSMUST00000158413 106 ntBASIC1.12□□□□□ -2.23
Ccdc36Q6PDM4 Gm23194-201ENSMUST00000158813 105 ntBASIC1.12□□□□□ -2.23
Ccdc36Q6PDM4 Gm25831-201ENSMUST00000158924 163 ntBASIC1.12□□□□□ -2.23
Ccdc36Q6PDM4 Gm24668-201ENSMUST00000158935 104 ntBASIC1.12□□□□□ -2.23
Ccdc36Q6PDM4 Gm23267-201ENSMUST00000178490 132 ntBASIC1.12□□□□□ -2.23
Ccdc36Q6PDM4 Gm27711-201ENSMUST00000183802 118 ntBASIC1.12□□□□□ -2.23
Ccdc36Q6PDM4 Gm27285-201ENSMUST00000183875 127 ntBASIC1.12□□□□□ -2.23
Ccdc36Q6PDM4 Gm27465-201ENSMUST00000184290 91 ntBASIC1.12□□□□□ -2.23
Ccdc36Q6PDM4 Gm44326-201ENSMUST00000198226 101 ntBASIC1.12□□□□□ -2.23
Ccdc36Q6PDM4 Gm22973-201ENSMUST00000083298 191 ntBASIC1.12□□□□□ -2.23
Ccdc36Q6PDM4 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 189.6 ms