Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Gm22586-201ENSMUST00000157507 122 ntBASIC-0.11□□□□□ -2.43
Tpm4Q6IRU2 Gm26090-201ENSMUST00000157897 128 ntBASIC-0.11□□□□□ -2.43
Tpm4Q6IRU2 Gm23191-201ENSMUST00000179147 107 ntBASIC-0.11□□□□□ -2.43
Tpm4Q6IRU2 Mir7229-201ENSMUST00000197062 53 ntBASIC-0.11□□□□□ -2.43
Tpm4Q6IRU2 AC116589.1-201ENSMUST00000220634 327 ntBASIC-0.11□□□□□ -2.43
Tpm4Q6IRU2 CT485612.2-201ENSMUST00000223014 151 ntBASIC-0.11□□□□□ -2.43
Tpm4Q6IRU2 AC098718.2-201ENSMUST00000226822 285 ntBASIC-0.11□□□□□ -2.43
Tpm4Q6IRU2 Gm25078-201ENSMUST00000082530 107 ntBASIC-0.11□□□□□ -2.43
Tpm4Q6IRU2 Gm22294-201ENSMUST00000083308 104 ntBASIC-0.11□□□□□ -2.43
Tpm4Q6IRU2 Gm26329-201ENSMUST00000093723 110 ntBASIC-0.11□□□□□ -2.43
Tpm4Q6IRU2 Gm24379-201ENSMUST00000122695 86 ntBASIC-0.12□□□□□ -2.43
Tpm4Q6IRU2 Gm38208-201ENSMUST00000192476 114 ntBASIC-0.12□□□□□ -2.43
Tpm4Q6IRU2 Snora20-201ENSMUST00000082703 128 ntBASIC-0.12□□□□□ -2.43
Tpm4Q6IRU2 Gm25814-201ENSMUST00000082754 107 ntBASIC-0.12□□□□□ -2.43
Tpm4Q6IRU2 Gm24208-201ENSMUST00000082783 135 ntBASIC-0.12□□□□□ -2.43
Tpm4Q6IRU2 Gm24037-201ENSMUST00000082871 180 ntBASIC-0.12□□□□□ -2.43
Tpm4Q6IRU2 Gm23097-201ENSMUST00000083448 105 ntBASIC-0.12□□□□□ -2.43
Tpm4Q6IRU2 Gm23126-201ENSMUST00000104260 134 ntBASIC-0.13□□□□□ -2.43
Tpm4Q6IRU2 Gm22791-201ENSMUST00000157232 145 ntBASIC-0.13□□□□□ -2.43
Tpm4Q6IRU2 Gm24549-201ENSMUST00000158647 139 ntBASIC-0.13□□□□□ -2.43
Tpm4Q6IRU2 Gm28330-201ENSMUST00000190353 171 ntBASIC-0.13□□□□□ -2.43
Tpm4Q6IRU2 Gm43472-201ENSMUST00000200175 154 ntBASIC-0.13□□□□□ -2.43
Tpm4Q6IRU2 Gm45544-201ENSMUST00000211130 88 ntBASIC-0.13□□□□□ -2.43
Tpm4Q6IRU2 AC136457.1-201ENSMUST00000224195 156 ntBASIC-0.13□□□□□ -2.43
Tpm4Q6IRU2 AC122769.2-201ENSMUST00000227248 302 ntBASIC-0.13□□□□□ -2.43
Tpm4Q6IRU2 Gm24164-201ENSMUST00000093663 104 ntBASIC-0.13□□□□□ -2.43
Tpm4Q6IRU2 Mir547-201ENSMUST00000102051 78 ntBASIC-0.14□□□□□ -2.43
Tpm4Q6IRU2 Mir1197-201ENSMUST00000117037 120 ntBASIC-0.14□□□□□ -2.43
Tpm4Q6IRU2 Gm11904-201ENSMUST00000120562 248 ntBASIC-0.14□□□□□ -2.43
Tpm4Q6IRU2 Gm23101-201ENSMUST00000157550 137 ntBASIC-0.14□□□□□ -2.43
Tpm4Q6IRU2 Gm16307-201ENSMUST00000161269 210 ntBASIC-0.14□□□□□ -2.43
Tpm4Q6IRU2 Gm8508-201ENSMUST00000061226 363 ntBASIC-0.14□□□□□ -2.43
Tpm4Q6IRU2 Mir411-201ENSMUST00000083543 82 ntBASIC-0.14□□□□□ -2.43
Tpm4Q6IRU2 Gm3867-201ENSMUST00000086108 279 ntBASIC-0.14□□□□□ -2.43
Tpm4Q6IRU2 Mir670-201ENSMUST00000102380 100 ntBASIC-0.15□□□□□ -2.43
Tpm4Q6IRU2 Gm25416-201ENSMUST00000104221 107 ntBASIC-0.15□□□□□ -2.43
Tpm4Q6IRU2 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC-0.15□□□□□ -2.43
Tpm4Q6IRU2 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.15□□□□□ -2.43
Tpm4Q6IRU2 Mir6350-201ENSMUST00000183639 105 ntBASIC-0.15□□□□□ -2.43
Tpm4Q6IRU2 Gm36946-201ENSMUST00000192706 435 ntBASIC-0.15□□□□□ -2.43
Tpm4Q6IRU2 Mir219b-201ENSMUST00000198317 65 ntBASIC-0.15□□□□□ -2.43
Tpm4Q6IRU2 Gm3702-201ENSMUST00000211754 346 ntBASIC-0.15□□□□□ -2.43
Tpm4Q6IRU2 AC102369.1-201ENSMUST00000218415 373 ntBASIC-0.15□□□□□ -2.43
Tpm4Q6IRU2 Snord82-201ENSMUST00000082889 70 ntBASIC-0.15□□□□□ -2.43
Tpm4Q6IRU2 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC-0.16□□□□□ -2.43
Tpm4Q6IRU2 Gm24116-201ENSMUST00000103975 107 ntBASIC-0.16□□□□□ -2.44
Tpm4Q6IRU2 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC-0.16□□□□□ -2.44
Tpm4Q6IRU2 Gm14293-201ENSMUST00000118528 577 ntBASIC-0.16□□□□□ -2.44
Tpm4Q6IRU2 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC-0.16□□□□□ -2.44
Tpm4Q6IRU2 Mir6377-201ENSMUST00000183760 114 ntBASIC-0.16□□□□□ -2.44
Tpm4Q6IRU2 Gm26379-202ENSMUST00000200225 132 ntBASIC-0.16□□□□□ -2.44
Tpm4Q6IRU2 Gm45616-201ENSMUST00000211711 319 ntBASIC-0.16□□□□□ -2.44
Tpm4Q6IRU2 Gm25309-201ENSMUST00000116728 126 ntBASIC-0.17□□□□□ -2.44
Tpm4Q6IRU2 Gm26393-201ENSMUST00000157625 129 ntBASIC-0.17□□□□□ -2.44
Tpm4Q6IRU2 Mir7010-201ENSMUST00000183464 63 ntBASIC-0.17□□□□□ -2.44
Tpm4Q6IRU2 Mir7j-201ENSMUST00000184427 122 ntBASIC-0.17□□□□□ -2.44
Tpm4Q6IRU2 Gm7654-201ENSMUST00000186738 683 ntBASIC-0.17□□□□□ -2.44
Tpm4Q6IRU2 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC-0.17□□□□□ -2.44
Tpm4Q6IRU2 Gm44345-201ENSMUST00000199560 135 ntBASIC-0.17□□□□□ -2.44
Tpm4Q6IRU2 AC116589.4-201ENSMUST00000222390 216 ntBASIC-0.17□□□□□ -2.44
Tpm4Q6IRU2 Gm22431-201ENSMUST00000158545 107 ntBASIC-0.18□□□□□ -2.44
Tpm4Q6IRU2 Gm23194-201ENSMUST00000158813 105 ntBASIC-0.18□□□□□ -2.44
Tpm4Q6IRU2 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC-0.18□□□□□ -2.44
Tpm4Q6IRU2 Gm22466-201ENSMUST00000175278 69 ntBASIC-0.18□□□□□ -2.44
Tpm4Q6IRU2 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC-0.18□□□□□ -2.44
Tpm4Q6IRU2 Mir496a-201ENSMUST00000093627 79 ntBASIC-0.18□□□□□ -2.44
Tpm4Q6IRU2 Gm23536-201ENSMUST00000157541 134 ntBASIC-0.19□□□□□ -2.44
Tpm4Q6IRU2 Gm24321-201ENSMUST00000175348 80 ntBASIC-0.19□□□□□ -2.44
Tpm4Q6IRU2 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC-0.19□□□□□ -2.44
Tpm4Q6IRU2 Gm37715-201ENSMUST00000193206 235 ntBASIC-0.19□□□□□ -2.44
Tpm4Q6IRU2 Gm44455-201ENSMUST00000200061 82 ntBASIC-0.19□□□□□ -2.44
Tpm4Q6IRU2 AC132437.1-201ENSMUST00000218308 320 ntBASIC-0.19□□□□□ -2.44
Tpm4Q6IRU2 AC129085.1-201ENSMUST00000225263 165 ntBASIC-0.19□□□□□ -2.44
Tpm4Q6IRU2 Gm12770-201ENSMUST00000121734 462 ntBASIC-0.2□□□□□ -2.44
Tpm4Q6IRU2 Gm28648-201ENSMUST00000190092 343 ntBASIC-0.2□□□□□ -2.44
Tpm4Q6IRU2 AC145736.2-201ENSMUST00000216305 365 ntBASIC-0.2□□□□□ -2.44
Tpm4Q6IRU2 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC-0.2□□□□□ -2.44
Tpm4Q6IRU2 AC166358.7-201ENSMUST00000221132 108 ntBASIC-0.2□□□□□ -2.44
Tpm4Q6IRU2 AC125543.5-201ENSMUST00000222799 108 ntBASIC-0.2□□□□□ -2.44
Tpm4Q6IRU2 Mir200a-201ENSMUST00000083466 90 ntBASIC-0.2□□□□□ -2.44
Tpm4Q6IRU2 Mir532-201ENSMUST00000093630 96 ntBASIC-0.2□□□□□ -2.44
Tpm4Q6IRU2 Gm24504-201ENSMUST00000157679 100 ntBASIC-0.21□□□□□ -2.44
Tpm4Q6IRU2 Gm23375-201ENSMUST00000175407 83 ntBASIC-0.21□□□□□ -2.44
Tpm4Q6IRU2 Gm24575-201ENSMUST00000175502 77 ntBASIC-0.21□□□□□ -2.44
Tpm4Q6IRU2 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.21□□□□□ -2.44
Tpm4Q6IRU2 Mir6896-201ENSMUST00000198033 73 ntBASIC-0.21□□□□□ -2.44
Tpm4Q6IRU2 Mirlet7g-201ENSMUST00000083506 88 ntBASIC-0.21□□□□□ -2.44
Tpm4Q6IRU2 Gm23921-201ENSMUST00000175258 107 ntBASIC-0.22□□□□□ -2.44
Tpm4Q6IRU2 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC-0.22□□□□□ -2.44
Tpm4Q6IRU2 Gm25450-201ENSMUST00000179144 107 ntBASIC-0.22□□□□□ -2.44
Tpm4Q6IRU2 AC132615.1-201ENSMUST00000213873 255 ntBASIC-0.22□□□□□ -2.44
Tpm4Q6IRU2 AL627387.1-201ENSMUST00000226063 250 ntBASIC-0.22□□□□□ -2.44
Tpm4Q6IRU2 AC125311.1-201ENSMUST00000226950 220 ntBASIC-0.22□□□□□ -2.44
Tpm4Q6IRU2 Gm24460-201ENSMUST00000082731 106 ntBASIC-0.22□□□□□ -2.44
Tpm4Q6IRU2 Gm25894-201ENSMUST00000083458 75 ntBASIC-0.22□□□□□ -2.44
Tpm4Q6IRU2 Mir196a-2-201ENSMUST00000083554 85 ntBASIC-0.22□□□□□ -2.44
Tpm4Q6IRU2 Gm25408-201ENSMUST00000104104 133 ntBASIC-0.23□□□□□ -2.45
Tpm4Q6IRU2 Gm11522-201ENSMUST00000120533 176 ntBASIC-0.23□□□□□ -2.45
Tpm4Q6IRU2 Gm22598-201ENSMUST00000157600 127 ntBASIC-0.23□□□□□ -2.45
Tpm4Q6IRU2 Gm24847-201ENSMUST00000158032 108 ntBASIC-0.23□□□□□ -2.45
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms