Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Gm22704-201ENSMUST00000083027 137 ntBASIC1.33□□□□□ -2.2
Trim27Q62158 Gm25538-201ENSMUST00000101943 107 ntBASIC1.32□□□□□ -2.2
Trim27Q62158 Gm22784-201ENSMUST00000104088 132 ntBASIC1.32□□□□□ -2.2
Trim27Q62158 Gm22553-201ENSMUST00000157797 295 ntBASIC1.32□□□□□ -2.2
Trim27Q62158 Gm23219-201ENSMUST00000158123 87 ntBASIC1.32□□□□□ -2.2
Trim27Q62158 Mir1931-201ENSMUST00000158589 119 ntBASIC1.32□□□□□ -2.2
Trim27Q62158 Gm27420-201ENSMUST00000183823 79 ntBASIC1.32□□□□□ -2.2
Trim27Q62158 Gm28862-201ENSMUST00000188246 163 ntBASIC1.32□□□□□ -2.2
Trim27Q62158 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC1.32□□□□□ -2.2
Trim27Q62158 Gm24624-201ENSMUST00000082617 164 ntBASIC1.32□□□□□ -2.2
Trim27Q62158 Gm26301-201ENSMUST00000104813 95 ntBASIC1.31□□□□□ -2.2
Trim27Q62158 Gm12837-201ENSMUST00000120131 373 ntBASIC1.31□□□□□ -2.2
Trim27Q62158 Gm24392-201ENSMUST00000158136 103 ntBASIC1.31□□□□□ -2.2
Trim27Q62158 Gm23581-201ENSMUST00000158531 63 ntBASIC1.31□□□□□ -2.2
Trim27Q62158 Gm24667-201ENSMUST00000158938 103 ntBASIC1.31□□□□□ -2.2
Trim27Q62158 Gm44057-201ENSMUST00000204547 96 ntBASIC1.31□□□□□ -2.2
Trim27Q62158 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.31□□□□□ -2.2
Trim27Q62158 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Trim27Q62158 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
Trim27Q62158 Gm24375-201ENSMUST00000104397 132 ntBASIC1.3□□□□□ -2.2
Trim27Q62158 Gm11792-201ENSMUST00000120640 168 ntBASIC1.3□□□□□ -2.2
Trim27Q62158 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.3□□□□□ -2.2
Trim27Q62158 Gm25664-201ENSMUST00000157697 107 ntBASIC1.3□□□□□ -2.2
Trim27Q62158 Gm23996-201ENSMUST00000158062 131 ntBASIC1.3□□□□□ -2.2
Trim27Q62158 Gm22802-201ENSMUST00000175621 89 ntBASIC1.3□□□□□ -2.2
Trim27Q62158 Gm25397-201ENSMUST00000176951 92 ntBASIC1.3□□□□□ -2.2
Trim27Q62158 Gm43563-201ENSMUST00000196761 198 ntBASIC1.3□□□□□ -2.2
Trim27Q62158 Gm25650-201ENSMUST00000083784 162 ntBASIC1.3□□□□□ -2.2
Trim27Q62158 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
Trim27Q62158 Gm11856-201ENSMUST00000118712 276 ntBASIC1.29□□□□□ -2.2
Trim27Q62158 Gm24808-201ENSMUST00000157993 118 ntBASIC1.29□□□□□ -2.2
Trim27Q62158 Gm26213-201ENSMUST00000158582 110 ntBASIC1.29□□□□□ -2.2
Trim27Q62158 CT033781.2-201ENSMUST00000221113 153 ntBASIC1.29□□□□□ -2.2
Trim27Q62158 Gm22571-201ENSMUST00000082984 70 ntBASIC1.29□□□□□ -2.2
Trim27Q62158 Gm23679-201ENSMUST00000083161 119 ntBASIC1.29□□□□□ -2.2
Trim27Q62158 Gm22233-201ENSMUST00000157464 114 ntBASIC1.28□□□□□ -2.2
Trim27Q62158 Mir1967-201ENSMUST00000157789 82 ntBASIC1.28□□□□□ -2.2
Trim27Q62158 Gm25868-201ENSMUST00000158253 114 ntBASIC1.28□□□□□ -2.2
Trim27Q62158 Gm23760-201ENSMUST00000158350 116 ntBASIC1.28□□□□□ -2.2
Trim27Q62158 Gm26402-201ENSMUST00000158499 113 ntBASIC1.28□□□□□ -2.2
Trim27Q62158 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.28□□□□□ -2.2
Trim27Q62158 Gm25235-201ENSMUST00000179933 107 ntBASIC1.28□□□□□ -2.2
Trim27Q62158 Gm27545-201ENSMUST00000184755 202 ntBASIC1.28□□□□□ -2.2
Trim27Q62158 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.28□□□□□ -2.2
Trim27Q62158 Gm44052-201ENSMUST00000203382 396 ntBASIC1.28□□□□□ -2.2
Trim27Q62158 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC1.28□□□□□ -2.2
Trim27Q62158 Mir880-201ENSMUST00000104809 78 ntBASIC1.27□□□□□ -2.21
Trim27Q62158 Mir1904-201ENSMUST00000122702 80 ntBASIC1.27□□□□□ -2.21
Trim27Q62158 Gm23328-201ENSMUST00000157418 132 ntBASIC1.27□□□□□ -2.21
Trim27Q62158 Gm22888-201ENSMUST00000158640 77 ntBASIC1.27□□□□□ -2.21
Trim27Q62158 Gm27905-201ENSMUST00000184005 207 ntBASIC1.27□□□□□ -2.21
Trim27Q62158 Gm27656-201ENSMUST00000185055 80 ntBASIC1.27□□□□□ -2.21
Trim27Q62158 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.27□□□□□ -2.21
Trim27Q62158 AC154245.1-201ENSMUST00000224615 601 ntBASIC1.27□□□□□ -2.21
Trim27Q62158 Gm22358-201ENSMUST00000082877 122 ntBASIC1.27□□□□□ -2.21
Trim27Q62158 Mir181b-2-201ENSMUST00000083644 89 ntBASIC1.27□□□□□ -2.21
Trim27Q62158 Gm25188-201ENSMUST00000083913 122 ntBASIC1.27□□□□□ -2.21
Trim27Q62158 AC158598.2-201ENSMUST00000213397 3832 ntBASIC1.27□□□□□ -2.21
Trim27Q62158 AC160984.1-201ENSMUST00000225855 3154 ntBASIC1.26□□□□□ -2.21
Trim27Q62158 Gm24006-201ENSMUST00000158462 132 ntBASIC1.26□□□□□ -2.21
Trim27Q62158 Gm22074-201ENSMUST00000158595 113 ntBASIC1.26□□□□□ -2.21
Trim27Q62158 Mir6394-201ENSMUST00000184738 99 ntBASIC1.26□□□□□ -2.21
Trim27Q62158 Gm38183-201ENSMUST00000193189 205 ntBASIC1.26□□□□□ -2.21
Trim27Q62158 Gm45508-201ENSMUST00000209298 299 ntBASIC1.26□□□□□ -2.21
Trim27Q62158 Gm23451-201ENSMUST00000083328 122 ntBASIC1.26□□□□□ -2.21
Trim27Q62158 n-R5s183-201ENSMUST00000083939 115 ntBASIC1.26□□□□□ -2.21
Trim27Q62158 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.26□□□□□ -2.21
Trim27Q62158 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Trim27Q62158 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
Trim27Q62158 Mir669l-201ENSMUST00000103771 98 ntBASIC1.25□□□□□ -2.21
Trim27Q62158 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.25□□□□□ -2.21
Trim27Q62158 Gm24221-201ENSMUST00000158833 313 ntBASIC1.25□□□□□ -2.21
Trim27Q62158 Gm29140-201ENSMUST00000190187 476 ntBASIC1.25□□□□□ -2.21
Trim27Q62158 Gm43199-201ENSMUST00000200019 307 ntBASIC1.25□□□□□ -2.21
Trim27Q62158 Gm44921-201ENSMUST00000205290 301 ntBASIC1.25□□□□□ -2.21
Trim27Q62158 Rny1-201ENSMUST00000083767 112 ntBASIC1.25□□□□□ -2.21
Trim27Q62158 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Trim27Q62158 Snord71-201ENSMUST00000104361 85 ntBASIC1.24□□□□□ -2.21
Trim27Q62158 Gm25424-201ENSMUST00000157612 58 ntBASIC1.24□□□□□ -2.21
Trim27Q62158 Gm25362-201ENSMUST00000158854 105 ntBASIC1.24□□□□□ -2.21
Trim27Q62158 Gm44358-201ENSMUST00000196301 98 ntBASIC1.24□□□□□ -2.21
Trim27Q62158 Mir3970-201ENSMUST00000199287 90 ntBASIC1.24□□□□□ -2.21
Trim27Q62158 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Trim27Q62158 Gm44563-201ENSMUST00000207958 178 ntBASIC1.24□□□□□ -2.21
Trim27Q62158 Gm45268-201ENSMUST00000210046 370 ntBASIC1.24□□□□□ -2.21
Trim27Q62158 CT010454.1-201ENSMUST00000225975 265 ntBASIC1.24□□□□□ -2.21
Trim27Q62158 Mir200b-201ENSMUST00000083615 70 ntBASIC1.24□□□□□ -2.21
Trim27Q62158 Gm25496-201ENSMUST00000104430 120 ntBASIC1.23□□□□□ -2.21
Trim27Q62158 Gm14792-201ENSMUST00000119725 258 ntBASIC1.23□□□□□ -2.21
Trim27Q62158 Gm24594-201ENSMUST00000122502 99 ntBASIC1.23□□□□□ -2.21
Trim27Q62158 Gm23340-201ENSMUST00000158955 123 ntBASIC1.23□□□□□ -2.21
Trim27Q62158 Mir1954-201ENSMUST00000175595 86 ntBASIC1.23□□□□□ -2.21
Trim27Q62158 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC1.23□□□□□ -2.21
Trim27Q62158 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.23□□□□□ -2.21
Trim27Q62158 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1.23□□□□□ -2.21
Trim27Q62158 Mir875-201ENSMUST00000104698 78 ntBASIC1.22□□□□□ -2.21
Trim27Q62158 Gm12797-201ENSMUST00000118645 273 ntBASIC1.22□□□□□ -2.21
Trim27Q62158 Gm11204-201ENSMUST00000122438 147 ntBASIC1.22□□□□□ -2.21
Trim27Q62158 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC1.22□□□□□ -2.21
Trim27Q62158 Mir669k-201ENSMUST00000177742 127 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms