| Foxd1 | Q61345 | n-R5s164-201 | ENSMUST00000122664 | 112 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | Gm24717-201 | ENSMUST00000157522 | 124 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | Gm26411-201 | ENSMUST00000157668 | 107 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | Gm22946-201 | ENSMUST00000158558 | 82 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | Gm24634-201 | ENSMUST00000158672 | 107 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | Gm22510-201 | ENSMUST00000179304 | 79 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | Gm26336-201 | ENSMUST00000179449 | 79 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | Gm26390-201 | ENSMUST00000179628 | 79 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | AC125350.4-201 | ENSMUST00000225895 | 273 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | Mir155-201 | ENSMUST00000083463 | 65 nt | BASIC | 2.88 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | Olfr805-203 | ENSMUST00000216794 | 3199 nt | APPRIS P1 TSL 5 BASIC | 2.88 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | Mir92-1-201 | ENSMUST00000102108 | 80 nt | BASIC | 2.87 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | Gm25945-201 | ENSMUST00000122484 | 135 nt | BASIC | 2.87 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | Gm23600-201 | ENSMUST00000157260 | 71 nt | BASIC | 2.87 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | Gm27672-201 | ENSMUST00000183751 | 204 nt | BASIC | 2.87 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | Gm18665-201 | ENSMUST00000189783 | 270 nt | BASIC | 2.87 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | Gm43381-201 | ENSMUST00000198553 | 165 nt | BASIC | 2.87 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | AC158598.1-201 | ENSMUST00000214349 | 3847 nt | BASIC | 2.87 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | Gm14567-201 | ENSMUST00000117155 | 174 nt | BASIC | 2.86 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | Gm13756-201 | ENSMUST00000117618 | 222 nt | BASIC | 2.86 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | Rnu7-201 | ENSMUST00000158458 | 62 nt | BASIC | 2.86 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | Gm37796-201 | ENSMUST00000195327 | 134 nt | BASIC | 2.86 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | Gm43911-201 | ENSMUST00000203097 | 76 nt | BASIC | 2.86 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | AC124739.2-201 | ENSMUST00000222201 | 109 nt | BASIC | 2.86 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | mt-Ta-201 | ENSMUST00000082398 | 69 nt | BASIC | 2.86 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | mt-Tt-201 | ENSMUST00000082422 | 67 nt | BASIC | 2.86 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | Gm24461-201 | ENSMUST00000082735 | 103 nt | BASIC | 2.86 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | Zfp960-201 | ENSMUST00000127027 | 2667 nt | APPRIS P1 TSL 1 (best) BASIC | 2.86 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | Ifi203-209 | ENSMUST00000156895 | 3605 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.85 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | n-R5s159-201 | ENSMUST00000122681 | 120 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | Gm24632-201 | ENSMUST00000122770 | 323 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | Gm44491-201 | ENSMUST00000196794 | 96 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | Gm45386-201 | ENSMUST00000210194 | 218 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | Olfr1153-202 | ENSMUST00000217436 | 2144 nt | APPRIS P1 TSL 5 BASIC | 2.85 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | Gm26456-201 | ENSMUST00000082831 | 111 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | Mir344-201 | ENSMUST00000083634 | 95 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | Gm26011-201 | ENSMUST00000104410 | 104 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | Mir293-201 | ENSMUST00000104841 | 80 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | Gm23983-201 | ENSMUST00000157142 | 114 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | Gm25371-201 | ENSMUST00000158162 | 101 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | Mir1927-201 | ENSMUST00000158579 | 109 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | Ptp4a1-206 | ENSMUST00000202889 | 135 nt | TSL 2 BASIC | 2.84 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | Gm44976-201 | ENSMUST00000205543 | 261 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | Gm44903-201 | ENSMUST00000206840 | 130 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | Gm24536-201 | ENSMUST00000083144 | 107 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| Foxd1 | Q61345 | Gm44578-201 | ENSMUST00000207236 | 3835 nt | BASIC | 2.84 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Olfr820-202 | ENSMUST00000214917 | 4701 nt | APPRIS P1 TSL 5 BASIC | 2.84 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Gm26624-201 | ENSMUST00000181486 | 3769 nt | TSL 5 BASIC | 2.83 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Gm24010-201 | ENSMUST00000157731 | 282 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Gm22535-201 | ENSMUST00000158174 | 119 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Gm24926-201 | ENSMUST00000178053 | 79 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Gm22632-201 | ENSMUST00000178266 | 79 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Gm29347-201 | ENSMUST00000186695 | 449 nt | TSL 3 BASIC | 2.83 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Gm33962-201 | ENSMUST00000182643 | 2592 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Arhgap5-201 | ENSMUST00000110725 | 5197 nt | APPRIS P1 TSL 1 (best) BASIC | 2.82 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Gm43373-201 | ENSMUST00000202552 | 2870 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Gm22752-201 | ENSMUST00000102083 | 109 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Gm15069-201 | ENSMUST00000117792 | 192 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Gm15068-201 | ENSMUST00000119796 | 192 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Mir669n-201 | ENSMUST00000158636 | 54 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Gm9156-201 | ENSMUST00000189660 | 463 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Gm38298-201 | ENSMUST00000193578 | 118 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Gm37027-201 | ENSMUST00000194642 | 256 nt | TSL 1 (best) BASIC | 2.82 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Gm44358-201 | ENSMUST00000196301 | 98 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Gm43898-201 | ENSMUST00000204456 | 424 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Gm45741-201 | ENSMUST00000212661 | 152 nt | TSL 1 (best) BASIC | 2.82 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Gm38407-201 | ENSMUST00000218017 | 474 nt | TSL 2 BASIC | 2.82 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Gm3333-201 | ENSMUST00000221637 | 452 nt | TSL 5 BASIC | 2.82 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Snord61-201 | ENSMUST00000083176 | 71 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Gm23249-201 | ENSMUST00000083369 | 161 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Olfr851-202 | ENSMUST00000214130 | 7123 nt | APPRIS P1 TSL 5 BASIC | 2.82 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Ranbp2-201 | ENSMUST00000003310 | 9608 nt | APPRIS P1 TSL 5 BASIC | 2.82 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | AC158598.2-201 | ENSMUST00000213397 | 3832 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Gm25090-201 | ENSMUST00000104000 | 132 nt | BASIC | 2.81 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Gm25787-201 | ENSMUST00000104709 | 92 nt | BASIC | 2.81 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Gm24747-201 | ENSMUST00000157835 | 87 nt | BASIC | 2.81 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Gm24394-201 | ENSMUST00000158141 | 123 nt | BASIC | 2.81 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Mir6394-201 | ENSMUST00000184738 | 99 nt | BASIC | 2.81 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Gm29604-201 | ENSMUST00000187176 | 163 nt | BASIC | 2.81 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Gm42719-201 | ENSMUST00000197393 | 355 nt | BASIC | 2.81 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Mir201-201 | ENSMUST00000083470 | 66 nt | BASIC | 2.81 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Vmn1r75-202 | ENSMUST00000226622 | 6638 nt | APPRIS P2 BASIC | 2.8 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Traj30-201 | ENSMUST00000103711 | 59 nt | APPRIS P1 BASIC | 2.8 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Gm11644-201 | ENSMUST00000119735 | 150 nt | BASIC | 2.8 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Gm23967-201 | ENSMUST00000175062 | 78 nt | BASIC | 2.8 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Gm27326-201 | ENSMUST00000183504 | 95 nt | BASIC | 2.8 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Olfr1007-ps1-201 | ENSMUST00000217468 | 138 nt | BASIC | 2.8 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Olfr1448-203 | ENSMUST00000213713 | 4336 nt | APPRIS P1 TSL 5 BASIC | 2.79 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Gm15067-201 | ENSMUST00000119534 | 156 nt | BASIC | 2.79 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Gm26157-201 | ENSMUST00000158974 | 126 nt | BASIC | 2.79 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Mir6353-201 | ENSMUST00000183596 | 113 nt | BASIC | 2.79 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Trav7-6-202 | ENSMUST00000184687 | 275 nt | APPRIS P1 BASIC | 2.79 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Mir3961-201 | ENSMUST00000198795 | 59 nt | BASIC | 2.79 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Mir7215-201 | ENSMUST00000200383 | 51 nt | BASIC | 2.79 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Gm44921-201 | ENSMUST00000205290 | 301 nt | BASIC | 2.79 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | AC120540.2-201 | ENSMUST00000221716 | 387 nt | BASIC | 2.79 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Snord118-201 | ENSMUST00000082965 | 135 nt | BASIC | 2.79 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Vmn1r78-202 | ENSMUST00000228244 | 7931 nt | APPRIS P1 BASIC | 2.79 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Snhg14-213 | ENSMUST00000190666 | 3708 nt | TSL 1 (best) BASIC | 2.78 | □□□□□ -1.96 | | |
| Foxd1 | Q61345 | Gm24375-201 | ENSMUST00000104397 | 132 nt | BASIC | 2.78 | □□□□□ -1.96 | | |