Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.14□□□□□ -2.07
Shroom1Q5SX79 Gm25113-201ENSMUST00000157185 143 ntBASIC2.14□□□□□ -2.07
Shroom1Q5SX79 Gm24851-201ENSMUST00000158028 103 ntBASIC2.14□□□□□ -2.07
Shroom1Q5SX79 Gm23337-201ENSMUST00000158959 118 ntBASIC2.14□□□□□ -2.07
Shroom1Q5SX79 AC120540.2-201ENSMUST00000221716 387 ntBASIC2.14□□□□□ -2.07
Shroom1Q5SX79 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.14□□□□□ -2.07
Shroom1Q5SX79 AC127371.3-201ENSMUST00000228129 415 ntBASIC2.14□□□□□ -2.07
Shroom1Q5SX79 Gm26922-201ENSMUST00000082687 72 ntBASIC2.14□□□□□ -2.07
Shroom1Q5SX79 Mir301-201ENSMUST00000083655 86 ntBASIC2.14□□□□□ -2.07
Shroom1Q5SX79 Gm25513-201ENSMUST00000083861 162 ntBASIC2.14□□□□□ -2.07
Shroom1Q5SX79 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Shroom1Q5SX79 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Shroom1Q5SX79 Gm23010-201ENSMUST00000104151 126 ntBASIC2.13□□□□□ -2.07
Shroom1Q5SX79 Gm25879-201ENSMUST00000104330 107 ntBASIC2.13□□□□□ -2.07
Shroom1Q5SX79 Mir293-201ENSMUST00000104841 80 ntBASIC2.13□□□□□ -2.07
Shroom1Q5SX79 Gm23390-201ENSMUST00000157393 106 ntBASIC2.13□□□□□ -2.07
Shroom1Q5SX79 Gm20477-201ENSMUST00000174028 280 ntBASIC2.13□□□□□ -2.07
Shroom1Q5SX79 Gm27722-201ENSMUST00000183908 76 ntBASIC2.13□□□□□ -2.07
Shroom1Q5SX79 Mir7016-201ENSMUST00000184308 72 ntBASIC2.13□□□□□ -2.07
Shroom1Q5SX79 Mir6388-201ENSMUST00000184417 75 ntBASIC2.13□□□□□ -2.07
Shroom1Q5SX79 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.13□□□□□ -2.07
Shroom1Q5SX79 Gm9251-201ENSMUST00000197202 628 ntBASIC2.13□□□□□ -2.07
Shroom1Q5SX79 Gm44326-201ENSMUST00000198226 101 ntBASIC2.13□□□□□ -2.07
Shroom1Q5SX79 Trav5-2-201ENSMUST00000199855 280 ntBASIC2.13□□□□□ -2.07
Shroom1Q5SX79 Mir669b-201ENSMUST00000102172 97 ntBASIC2.12□□□□□ -2.07
Shroom1Q5SX79 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Shroom1Q5SX79 Gm25377-201ENSMUST00000104334 129 ntBASIC2.12□□□□□ -2.07
Shroom1Q5SX79 Gm23109-201ENSMUST00000116867 126 ntBASIC2.12□□□□□ -2.07
Shroom1Q5SX79 Gm22850-201ENSMUST00000157714 82 ntBASIC2.12□□□□□ -2.07
Shroom1Q5SX79 Gm25460-201ENSMUST00000157954 127 ntBASIC2.12□□□□□ -2.07
Shroom1Q5SX79 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.12□□□□□ -2.07
Shroom1Q5SX79 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC2.12□□□□□ -2.07
Shroom1Q5SX79 AL627387.1-201ENSMUST00000226063 250 ntBASIC2.12□□□□□ -2.07
Shroom1Q5SX79 Mir218-1-201ENSMUST00000083669 110 ntBASIC2.12□□□□□ -2.07
Shroom1Q5SX79 Gm22723-201ENSMUST00000083820 129 ntBASIC2.12□□□□□ -2.07
Shroom1Q5SX79 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Shroom1Q5SX79 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Shroom1Q5SX79 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
Shroom1Q5SX79 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
Shroom1Q5SX79 Gm23043-201ENSMUST00000157890 109 ntBASIC2.11□□□□□ -2.07
Shroom1Q5SX79 Gm23342-201ENSMUST00000158958 115 ntBASIC2.11□□□□□ -2.07
Shroom1Q5SX79 Gm28409-201ENSMUST00000187064 103 ntBASIC2.11□□□□□ -2.07
Shroom1Q5SX79 Gm22828-201ENSMUST00000083768 107 ntBASIC2.11□□□□□ -2.07
Shroom1Q5SX79 Gm23947-201ENSMUST00000093636 107 ntBASIC2.11□□□□□ -2.07
Shroom1Q5SX79 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Shroom1Q5SX79 Gm43877-201ENSMUST00000205029 2238 ntBASIC2.1□□□□□ -2.07
Shroom1Q5SX79 Gm25825-201ENSMUST00000157091 124 ntBASIC2.1□□□□□ -2.07
Shroom1Q5SX79 Gm25836-201ENSMUST00000158918 123 ntBASIC2.1□□□□□ -2.07
Shroom1Q5SX79 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Shroom1Q5SX79 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Shroom1Q5SX79 Gm10172-201ENSMUST00000085929 558 ntBASIC2.1□□□□□ -2.07
Shroom1Q5SX79 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.09□□□□□ -2.07
Shroom1Q5SX79 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Shroom1Q5SX79 Gm15281-201ENSMUST00000125181 351 ntBASIC2.09□□□□□ -2.07
Shroom1Q5SX79 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.09□□□□□ -2.07
Shroom1Q5SX79 Gm26360-201ENSMUST00000158872 103 ntBASIC2.09□□□□□ -2.07
Shroom1Q5SX79 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.09□□□□□ -2.07
Shroom1Q5SX79 Gm26379-202ENSMUST00000200225 132 ntBASIC2.09□□□□□ -2.07
Shroom1Q5SX79 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.09□□□□□ -2.07
Shroom1Q5SX79 Mir155-201ENSMUST00000083463 65 ntBASIC2.09□□□□□ -2.07
Shroom1Q5SX79 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
Shroom1Q5SX79 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.09□□□□□ -2.08
Shroom1Q5SX79 Gm24478-201ENSMUST00000157439 158 ntBASIC2.08□□□□□ -2.08
Shroom1Q5SX79 Gm23080-201ENSMUST00000157846 103 ntBASIC2.08□□□□□ -2.08
Shroom1Q5SX79 Gm25658-201ENSMUST00000158472 128 ntBASIC2.08□□□□□ -2.08
Shroom1Q5SX79 Gm37116-201ENSMUST00000195161 147 ntBASIC2.08□□□□□ -2.08
Shroom1Q5SX79 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC2.08□□□□□ -2.08
Shroom1Q5SX79 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.08□□□□□ -2.08
Shroom1Q5SX79 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.08□□□□□ -2.08
Shroom1Q5SX79 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Shroom1Q5SX79 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Shroom1Q5SX79 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.07□□□□□ -2.08
Shroom1Q5SX79 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.07□□□□□ -2.08
Shroom1Q5SX79 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Shroom1Q5SX79 Gm22612-201ENSMUST00000158293 101 ntBASIC2.07□□□□□ -2.08
Shroom1Q5SX79 Gm37545-201ENSMUST00000186512 148 ntBASIC2.07□□□□□ -2.08
Shroom1Q5SX79 Gm38364-201ENSMUST00000191814 179 ntBASIC2.07□□□□□ -2.08
Shroom1Q5SX79 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.07□□□□□ -2.08
Shroom1Q5SX79 AC129202.1-201ENSMUST00000224895 526 ntBASIC2.07□□□□□ -2.08
Shroom1Q5SX79 Gm23138-201ENSMUST00000083365 103 ntBASIC2.07□□□□□ -2.08
Shroom1Q5SX79 Gm11334-201ENSMUST00000121969 156 ntBASIC2.06□□□□□ -2.08
Shroom1Q5SX79 Gm23469-201ENSMUST00000157131 104 ntBASIC2.06□□□□□ -2.08
Shroom1Q5SX79 Gm24634-201ENSMUST00000158672 107 ntBASIC2.06□□□□□ -2.08
Shroom1Q5SX79 Snord87-201ENSMUST00000175437 87 ntBASIC2.06□□□□□ -2.08
Shroom1Q5SX79 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC2.06□□□□□ -2.08
Shroom1Q5SX79 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.06□□□□□ -2.08
Shroom1Q5SX79 Gm24410-201ENSMUST00000083433 107 ntBASIC2.06□□□□□ -2.08
Shroom1Q5SX79 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC2.06□□□□□ -2.08
Shroom1Q5SX79 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
Shroom1Q5SX79 Gm23772-201ENSMUST00000104433 102 ntBASIC2.05□□□□□ -2.08
Shroom1Q5SX79 Snord90-201ENSMUST00000104568 111 ntBASIC2.05□□□□□ -2.08
Shroom1Q5SX79 Gm24141-201ENSMUST00000122776 115 ntBASIC2.05□□□□□ -2.08
Shroom1Q5SX79 Gm15692-201ENSMUST00000152173 352 ntBASIC2.05□□□□□ -2.08
Shroom1Q5SX79 Gm25980-201ENSMUST00000157176 218 ntBASIC2.05□□□□□ -2.08
Shroom1Q5SX79 Gm23044-201ENSMUST00000157891 100 ntBASIC2.05□□□□□ -2.08
Shroom1Q5SX79 Gm24394-201ENSMUST00000158141 123 ntBASIC2.05□□□□□ -2.08
Shroom1Q5SX79 Gm24668-201ENSMUST00000158935 104 ntBASIC2.05□□□□□ -2.08
Shroom1Q5SX79 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.05□□□□□ -2.08
Shroom1Q5SX79 Gm22775-201ENSMUST00000177630 120 ntBASIC2.05□□□□□ -2.08
Shroom1Q5SX79 Gm23569-201ENSMUST00000180120 120 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 157.4 ms