Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm25750-201ENSMUST00000175483 112 ntBASIC1.47□□□□□ -2.17
Vps54Q5SPW0 Gm21064-202ENSMUST00000190583 278 ntBASIC1.47□□□□□ -2.17
Vps54Q5SPW0 Gm43602-201ENSMUST00000196772 300 ntBASIC1.47□□□□□ -2.17
Vps54Q5SPW0 Gm42855-201ENSMUST00000197388 253 ntBASIC1.47□□□□□ -2.17
Vps54Q5SPW0 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Vps54Q5SPW0 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.47□□□□□ -2.17
Vps54Q5SPW0 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.47□□□□□ -2.17
Vps54Q5SPW0 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Vps54Q5SPW0 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.47□□□□□ -2.17
Vps54Q5SPW0 Gm23892-201ENSMUST00000158105 130 ntBASIC1.46□□□□□ -2.18
Vps54Q5SPW0 Mir5104-201ENSMUST00000175319 94 ntBASIC1.46□□□□□ -2.18
Vps54Q5SPW0 Mir669k-201ENSMUST00000177742 127 ntBASIC1.46□□□□□ -2.18
Vps54Q5SPW0 Gm25673-201ENSMUST00000179957 127 ntBASIC1.46□□□□□ -2.18
Vps54Q5SPW0 Mir146-201ENSMUST00000083667 65 ntBASIC1.46□□□□□ -2.18
Vps54Q5SPW0 Mir490-201ENSMUST00000093567 84 ntBASIC1.46□□□□□ -2.18
Vps54Q5SPW0 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.45□□□□□ -2.18
Vps54Q5SPW0 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.45□□□□□ -2.18
Vps54Q5SPW0 Mir343-201ENSMUST00000102360 75 ntBASIC1.45□□□□□ -2.18
Vps54Q5SPW0 Mir466b-8-201ENSMUST00000103883 86 ntBASIC1.45□□□□□ -2.18
Vps54Q5SPW0 Gm22145-201ENSMUST00000157396 148 ntBASIC1.45□□□□□ -2.18
Vps54Q5SPW0 Gm23083-201ENSMUST00000157851 116 ntBASIC1.45□□□□□ -2.18
Vps54Q5SPW0 Gm23277-201ENSMUST00000157914 136 ntBASIC1.45□□□□□ -2.18
Vps54Q5SPW0 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC1.45□□□□□ -2.18
Vps54Q5SPW0 Mir466e-201ENSMUST00000198862 84 ntBASIC1.45□□□□□ -2.18
Vps54Q5SPW0 Mir466c-1-201ENSMUST00000200654 84 ntBASIC1.45□□□□□ -2.18
Vps54Q5SPW0 Gm36189-201ENSMUST00000204113 523 ntBASIC1.45□□□□□ -2.18
Vps54Q5SPW0 n-R5s183-201ENSMUST00000083939 115 ntBASIC1.45□□□□□ -2.18
Vps54Q5SPW0 AC160984.1-201ENSMUST00000225855 3154 ntBASIC1.45□□□□□ -2.18
Vps54Q5SPW0 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.44□□□□□ -2.18
Vps54Q5SPW0 Gm25538-201ENSMUST00000101943 107 ntBASIC1.44□□□□□ -2.18
Vps54Q5SPW0 Gm24865-201ENSMUST00000103246 96 ntBASIC1.44□□□□□ -2.18
Vps54Q5SPW0 Gm22051-201ENSMUST00000117002 127 ntBASIC1.44□□□□□ -2.18
Vps54Q5SPW0 Gm6897-201ENSMUST00000117714 138 ntBASIC1.44□□□□□ -2.18
Vps54Q5SPW0 Gm14758-201ENSMUST00000119104 138 ntBASIC1.44□□□□□ -2.18
Vps54Q5SPW0 Gm11792-201ENSMUST00000120640 168 ntBASIC1.44□□□□□ -2.18
Vps54Q5SPW0 Gm20630-201ENSMUST00000177387 551 ntBASIC1.44□□□□□ -2.18
Vps54Q5SPW0 Gm23141-201ENSMUST00000178682 94 ntBASIC1.44□□□□□ -2.18
Vps54Q5SPW0 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.44□□□□□ -2.18
Vps54Q5SPW0 Gm27585-201ENSMUST00000183717 199 ntBASIC1.44□□□□□ -2.18
Vps54Q5SPW0 Gm44057-201ENSMUST00000204547 96 ntBASIC1.44□□□□□ -2.18
Vps54Q5SPW0 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.44□□□□□ -2.18
Vps54Q5SPW0 Gm24121-201ENSMUST00000102029 106 ntBASIC1.43□□□□□ -2.18
Vps54Q5SPW0 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Vps54Q5SPW0 Gm22780-201ENSMUST00000104084 132 ntBASIC1.43□□□□□ -2.18
Vps54Q5SPW0 Snord89-201ENSMUST00000104516 110 ntBASIC1.43□□□□□ -2.18
Vps54Q5SPW0 Gm12815-201ENSMUST00000121737 135 ntBASIC1.43□□□□□ -2.18
Vps54Q5SPW0 Gm23655-201ENSMUST00000122627 105 ntBASIC1.43□□□□□ -2.18
Vps54Q5SPW0 Gm22586-201ENSMUST00000157507 122 ntBASIC1.43□□□□□ -2.18
Vps54Q5SPW0 Gm22403-201ENSMUST00000174919 84 ntBASIC1.43□□□□□ -2.18
Vps54Q5SPW0 Gm25749-201ENSMUST00000175485 111 ntBASIC1.43□□□□□ -2.18
Vps54Q5SPW0 Gm29603-201ENSMUST00000186792 334 ntBASIC1.43□□□□□ -2.18
Vps54Q5SPW0 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.43□□□□□ -2.18
Vps54Q5SPW0 Snord1a-201ENSMUST00000083160 74 ntBASIC1.43□□□□□ -2.18
Vps54Q5SPW0 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Vps54Q5SPW0 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Vps54Q5SPW0 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.43□□□□□ -2.18
Vps54Q5SPW0 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
Vps54Q5SPW0 Gm11334-201ENSMUST00000121969 156 ntBASIC1.42□□□□□ -2.18
Vps54Q5SPW0 Gm22485-201ENSMUST00000157990 109 ntBASIC1.42□□□□□ -2.18
Vps54Q5SPW0 Gm23542-201ENSMUST00000158208 96 ntBASIC1.42□□□□□ -2.18
Vps54Q5SPW0 Gm26029-201ENSMUST00000158659 132 ntBASIC1.42□□□□□ -2.18
Vps54Q5SPW0 Gm24634-201ENSMUST00000158672 107 ntBASIC1.42□□□□□ -2.18
Vps54Q5SPW0 Gm23636-201ENSMUST00000175070 95 ntBASIC1.42□□□□□ -2.18
Vps54Q5SPW0 Mir3061-201ENSMUST00000175129 91 ntBASIC1.42□□□□□ -2.18
Vps54Q5SPW0 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Vps54Q5SPW0 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.42□□□□□ -2.18
Vps54Q5SPW0 Gm44326-201ENSMUST00000198226 101 ntBASIC1.42□□□□□ -2.18
Vps54Q5SPW0 Gm45508-201ENSMUST00000209298 299 ntBASIC1.42□□□□□ -2.18
Vps54Q5SPW0 Gm22477-201ENSMUST00000122569 316 ntBASIC1.41□□□□□ -2.18
Vps54Q5SPW0 Gm25558-201ENSMUST00000158083 106 ntBASIC1.41□□□□□ -2.18
Vps54Q5SPW0 Gm25820-201ENSMUST00000198589 127 ntBASIC1.41□□□□□ -2.18
Vps54Q5SPW0 Mir6962-201ENSMUST00000199512 63 ntBASIC1.41□□□□□ -2.18
Vps54Q5SPW0 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.41□□□□□ -2.18
Vps54Q5SPW0 Gm23299-201ENSMUST00000082708 79 ntBASIC1.41□□□□□ -2.18
Vps54Q5SPW0 Gm22884-201ENSMUST00000083127 140 ntBASIC1.41□□□□□ -2.18
Vps54Q5SPW0 Gm22743-201ENSMUST00000083445 133 ntBASIC1.41□□□□□ -2.18
Vps54Q5SPW0 Mir384-201ENSMUST00000083565 88 ntBASIC1.41□□□□□ -2.18
Vps54Q5SPW0 Gm24522-201ENSMUST00000083964 108 ntBASIC1.41□□□□□ -2.18
Vps54Q5SPW0 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
Vps54Q5SPW0 Gm22164-201ENSMUST00000158413 106 ntBASIC1.4□□□□□ -2.19
Vps54Q5SPW0 Mir1931-201ENSMUST00000158589 119 ntBASIC1.4□□□□□ -2.19
Vps54Q5SPW0 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.4□□□□□ -2.19
Vps54Q5SPW0 Gm22929-201ENSMUST00000175517 107 ntBASIC1.4□□□□□ -2.19
Vps54Q5SPW0 Gm28344-201ENSMUST00000185704 279 ntBASIC1.4□□□□□ -2.19
Vps54Q5SPW0 Gm9251-201ENSMUST00000197202 628 ntBASIC1.4□□□□□ -2.19
Vps54Q5SPW0 Gm46993-201ENSMUST00000220708 259 ntBASIC1.4□□□□□ -2.19
Vps54Q5SPW0 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
Vps54Q5SPW0 Gm12449-201ENSMUST00000117572 234 ntBASIC1.39□□□□□ -2.19
Vps54Q5SPW0 Gm11856-201ENSMUST00000118712 276 ntBASIC1.39□□□□□ -2.19
Vps54Q5SPW0 Gm22228-201ENSMUST00000157364 101 ntBASIC1.39□□□□□ -2.19
Vps54Q5SPW0 Gm23584-201ENSMUST00000157655 129 ntBASIC1.39□□□□□ -2.19
Vps54Q5SPW0 Gm25015-201ENSMUST00000158400 128 ntBASIC1.39□□□□□ -2.19
Vps54Q5SPW0 Traj60-201ENSMUST00000167781 54 ntBASIC1.39□□□□□ -2.19
Vps54Q5SPW0 Mir6350-201ENSMUST00000183639 105 ntBASIC1.39□□□□□ -2.19
Vps54Q5SPW0 Gm24494-201ENSMUST00000083804 81 ntBASIC1.39□□□□□ -2.19
Vps54Q5SPW0 Gm24523-201ENSMUST00000083965 132 ntBASIC1.39□□□□□ -2.19
Vps54Q5SPW0 Snord19-201ENSMUST00000104609 76 ntBASIC1.38□□□□□ -2.19
Vps54Q5SPW0 Gm25654-201ENSMUST00000158467 88 ntBASIC1.38□□□□□ -2.19
Vps54Q5SPW0 Gm28669-201ENSMUST00000188400 100 ntBASIC1.38□□□□□ -2.19
Vps54Q5SPW0 Snord96a-201ENSMUST00000082791 81 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 702.9 ms