Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm3867-201ENSMUST00000086108 279 ntBASIC-0.28□□□□□ -2.45
Trav5d-4Q5R1F6 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.29□□□□□ -2.46
Trav5d-4Q5R1F6 Mir5124a-201ENSMUST00000175528 72 ntBASIC-0.29□□□□□ -2.46
Trav5d-4Q5R1F6 Gm26335-201ENSMUST00000178449 107 ntBASIC-0.29□□□□□ -2.46
Trav5d-4Q5R1F6 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC-0.29□□□□□ -2.46
Trav5d-4Q5R1F6 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC-0.29□□□□□ -2.46
Trav5d-4Q5R1F6 Snord85-201ENSMUST00000083262 73 ntBASIC-0.29□□□□□ -2.46
Trav5d-4Q5R1F6 Gm23708-201ENSMUST00000104367 123 ntBASIC-0.3□□□□□ -2.46
Trav5d-4Q5R1F6 Gm22048-201ENSMUST00000104721 89 ntBASIC-0.3□□□□□ -2.46
Trav5d-4Q5R1F6 Gm22435-201ENSMUST00000158552 128 ntBASIC-0.3□□□□□ -2.46
Trav5d-4Q5R1F6 Gm29432-201ENSMUST00000185397 139 ntBASIC-0.3□□□□□ -2.46
Trav5d-4Q5R1F6 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC-0.3□□□□□ -2.46
Trav5d-4Q5R1F6 AC167192.2-201ENSMUST00000224794 198 ntBASIC-0.3□□□□□ -2.46
Trav5d-4Q5R1F6 n-R5s183-201ENSMUST00000083939 115 ntBASIC-0.3□□□□□ -2.46
Trav5d-4Q5R1F6 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.31□□□□□ -2.46
Trav5d-4Q5R1F6 Gm24467-201ENSMUST00000157887 126 ntBASIC-0.31□□□□□ -2.46
Trav5d-4Q5R1F6 Gm23665-201ENSMUST00000158054 62 ntBASIC-0.31□□□□□ -2.46
Trav5d-4Q5R1F6 Gm23763-201ENSMUST00000158345 60 ntBASIC-0.31□□□□□ -2.46
Trav5d-4Q5R1F6 Gm23016-201ENSMUST00000158431 62 ntBASIC-0.31□□□□□ -2.46
Trav5d-4Q5R1F6 Gm23194-201ENSMUST00000158813 105 ntBASIC-0.31□□□□□ -2.46
Trav5d-4Q5R1F6 Gm26164-201ENSMUST00000083793 104 ntBASIC-0.31□□□□□ -2.46
Trav5d-4Q5R1F6 Gm24278-201ENSMUST00000104239 127 ntBASIC-0.32□□□□□ -2.46
Trav5d-4Q5R1F6 Gm25885-201ENSMUST00000157779 109 ntBASIC-0.32□□□□□ -2.46
Trav5d-4Q5R1F6 Gm24241-201ENSMUST00000157787 145 ntBASIC-0.32□□□□□ -2.46
Trav5d-4Q5R1F6 Gm22962-201ENSMUST00000157962 73 ntBASIC-0.32□□□□□ -2.46
Trav5d-4Q5R1F6 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC-0.32□□□□□ -2.46
Trav5d-4Q5R1F6 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC-0.32□□□□□ -2.46
Trav5d-4Q5R1F6 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.32□□□□□ -2.46
Trav5d-4Q5R1F6 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.32□□□□□ -2.46
Trav5d-4Q5R1F6 Gm22576-201ENSMUST00000083733 104 ntBASIC-0.32□□□□□ -2.46
Trav5d-4Q5R1F6 Gm24164-201ENSMUST00000093663 104 ntBASIC-0.32□□□□□ -2.46
Trav5d-4Q5R1F6 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.33□□□□□ -2.46
Trav5d-4Q5R1F6 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC-0.33□□□□□ -2.46
Trav5d-4Q5R1F6 Gm25507-201ENSMUST00000116981 144 ntBASIC-0.33□□□□□ -2.46
Trav5d-4Q5R1F6 Gm14766-201ENSMUST00000121689 367 ntBASIC-0.33□□□□□ -2.46
Trav5d-4Q5R1F6 Gm26090-201ENSMUST00000157897 128 ntBASIC-0.33□□□□□ -2.46
Trav5d-4Q5R1F6 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.33□□□□□ -2.46
Trav5d-4Q5R1F6 Mir3105-201ENSMUST00000175480 85 ntBASIC-0.33□□□□□ -2.46
Trav5d-4Q5R1F6 Gm22887-201ENSMUST00000178586 107 ntBASIC-0.33□□□□□ -2.46
Trav5d-4Q5R1F6 Gm28438-201ENSMUST00000188299 345 ntBASIC-0.33□□□□□ -2.46
Trav5d-4Q5R1F6 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC-0.33□□□□□ -2.46
Trav5d-4Q5R1F6 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC-0.33□□□□□ -2.46
Trav5d-4Q5R1F6 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.33□□□□□ -2.46
Trav5d-4Q5R1F6 Gm45544-201ENSMUST00000211130 88 ntBASIC-0.33□□□□□ -2.46
Trav5d-4Q5R1F6 AC141438.3-201ENSMUST00000215632 202 ntBASIC-0.33□□□□□ -2.46
Trav5d-4Q5R1F6 Gm8508-201ENSMUST00000061226 363 ntBASIC-0.33□□□□□ -2.46
Trav5d-4Q5R1F6 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC-0.33□□□□□ -2.46
Trav5d-4Q5R1F6 Snora20-201ENSMUST00000082703 128 ntBASIC-0.33□□□□□ -2.46
Trav5d-4Q5R1F6 Gm25930-201ENSMUST00000082785 107 ntBASIC-0.33□□□□□ -2.46
Trav5d-4Q5R1F6 Gm25408-201ENSMUST00000104104 133 ntBASIC-0.34□□□□□ -2.46
Trav5d-4Q5R1F6 Gm23759-201ENSMUST00000158351 268 ntBASIC-0.34□□□□□ -2.46
Trav5d-4Q5R1F6 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC-0.34□□□□□ -2.46
Trav5d-4Q5R1F6 Gm27943-201ENSMUST00000184844 116 ntBASIC-0.34□□□□□ -2.46
Trav5d-4Q5R1F6 Gm28669-201ENSMUST00000188400 100 ntBASIC-0.34□□□□□ -2.46
Trav5d-4Q5R1F6 Gm18291-201ENSMUST00000190791 301 ntBASIC-0.34□□□□□ -2.46
Trav5d-4Q5R1F6 Gm37715-201ENSMUST00000193206 235 ntBASIC-0.34□□□□□ -2.46
Trav5d-4Q5R1F6 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC-0.34□□□□□ -2.46
Trav5d-4Q5R1F6 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC-0.34□□□□□ -2.46
Trav5d-4Q5R1F6 Gm22248-201ENSMUST00000082482 150 ntBASIC-0.34□□□□□ -2.46
Trav5d-4Q5R1F6 Mir214-201ENSMUST00000083582 110 ntBASIC-0.34□□□□□ -2.46
Trav5d-4Q5R1F6 Mir547-201ENSMUST00000102051 78 ntBASIC-0.35□□□□□ -2.47
Trav5d-4Q5R1F6 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC-0.35□□□□□ -2.47
Trav5d-4Q5R1F6 Gm24962-201ENSMUST00000157917 109 ntBASIC-0.35□□□□□ -2.47
Trav5d-4Q5R1F6 Mir6350-201ENSMUST00000183639 105 ntBASIC-0.35□□□□□ -2.47
Trav5d-4Q5R1F6 Mir191-201ENSMUST00000196210 74 ntBASIC-0.35□□□□□ -2.47
Trav5d-4Q5R1F6 AC116319.1-201ENSMUST00000227765 222 ntBASIC-0.35□□□□□ -2.47
Trav5d-4Q5R1F6 Gm24793-201ENSMUST00000104289 132 ntBASIC-0.36□□□□□ -2.47
Trav5d-4Q5R1F6 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC-0.36□□□□□ -2.47
Trav5d-4Q5R1F6 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC-0.36□□□□□ -2.47
Trav5d-4Q5R1F6 Gm22087-201ENSMUST00000158339 88 ntBASIC-0.36□□□□□ -2.47
Trav5d-4Q5R1F6 Gm23375-201ENSMUST00000175407 83 ntBASIC-0.36□□□□□ -2.47
Trav5d-4Q5R1F6 Gm27957-201ENSMUST00000184054 127 ntBASIC-0.36□□□□□ -2.47
Trav5d-4Q5R1F6 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.36□□□□□ -2.47
Trav5d-4Q5R1F6 Gm43472-201ENSMUST00000200175 154 ntBASIC-0.36□□□□□ -2.47
Trav5d-4Q5R1F6 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.36□□□□□ -2.47
Trav5d-4Q5R1F6 Gm18113-201ENSMUST00000220630 303 ntBASIC-0.36□□□□□ -2.47
Trav5d-4Q5R1F6 AC098718.2-201ENSMUST00000226822 285 ntBASIC-0.36□□□□□ -2.47
Trav5d-4Q5R1F6 Gm22294-201ENSMUST00000083308 104 ntBASIC-0.36□□□□□ -2.47
Trav5d-4Q5R1F6 Gm25497-201ENSMUST00000104425 132 ntBASIC-0.37□□□□□ -2.47
Trav5d-4Q5R1F6 Gm23492-201ENSMUST00000116837 115 ntBASIC-0.37□□□□□ -2.47
Trav5d-4Q5R1F6 Gm22586-201ENSMUST00000157507 122 ntBASIC-0.37□□□□□ -2.47
Trav5d-4Q5R1F6 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC-0.37□□□□□ -2.47
Trav5d-4Q5R1F6 Mir6390-201ENSMUST00000184405 129 ntBASIC-0.37□□□□□ -2.47
Trav5d-4Q5R1F6 Mir7j-201ENSMUST00000184427 122 ntBASIC-0.37□□□□□ -2.47
Trav5d-4Q5R1F6 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC-0.37□□□□□ -2.47
Trav5d-4Q5R1F6 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC-0.37□□□□□ -2.47
Trav5d-4Q5R1F6 Gm45402-201ENSMUST00000211796 223 ntBASIC-0.37□□□□□ -2.47
Trav5d-4Q5R1F6 Gm26108-201ENSMUST00000083973 191 ntBASIC-0.37□□□□□ -2.47
Trav5d-4Q5R1F6 Gm12584-201ENSMUST00000117109 1105 ntBASIC-0.38□□□□□ -2.47
Trav5d-4Q5R1F6 Gm13518-201ENSMUST00000120018 233 ntBASIC-0.38□□□□□ -2.47
Trav5d-4Q5R1F6 Gm23212-201ENSMUST00000122718 60 ntBASIC-0.38□□□□□ -2.47
Trav5d-4Q5R1F6 Gm22883-201ENSMUST00000157376 106 ntBASIC-0.38□□□□□ -2.47
Trav5d-4Q5R1F6 Gm22967-201ENSMUST00000157956 239 ntBASIC-0.38□□□□□ -2.47
Trav5d-4Q5R1F6 Gm23020-201ENSMUST00000158766 253 ntBASIC-0.38□□□□□ -2.47
Trav5d-4Q5R1F6 Mir100-201ENSMUST00000175270 80 ntBASIC-0.38□□□□□ -2.47
Trav5d-4Q5R1F6 Gm25314-201ENSMUST00000178810 79 ntBASIC-0.38□□□□□ -2.47
Trav5d-4Q5R1F6 Gm24415-201ENSMUST00000180218 107 ntBASIC-0.38□□□□□ -2.47
Trav5d-4Q5R1F6 Gm36946-201ENSMUST00000192706 435 ntBASIC-0.38□□□□□ -2.47
Trav5d-4Q5R1F6 Gm24116-201ENSMUST00000103975 107 ntBASIC-0.39□□□□□ -2.47
Trav5d-4Q5R1F6 Gm11386-201ENSMUST00000117761 347 ntBASIC-0.39□□□□□ -2.47
Retrieved 100 of 76,532 protein–RNA pairs in 104.4 ms