Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm23761-201ENSMUST00000158347 104 ntBASIC5.18□□□□□ -1.58
Trim41Q5NCC3 Mir1950-201ENSMUST00000158526 74 ntBASIC5.18□□□□□ -1.58
Trim41Q5NCC3 Gm23770-201ENSMUST00000178009 108 ntBASIC5.18□□□□□ -1.58
Trim41Q5NCC3 Gm22832-201ENSMUST00000178022 108 ntBASIC5.18□□□□□ -1.58
Trim41Q5NCC3 Gm23863-201ENSMUST00000178265 108 ntBASIC5.18□□□□□ -1.58
Trim41Q5NCC3 Gm24828-201ENSMUST00000178507 108 ntBASIC5.18□□□□□ -1.58
Trim41Q5NCC3 Gm23052-201ENSMUST00000178633 108 ntBASIC5.18□□□□□ -1.58
Trim41Q5NCC3 Gm25729-201ENSMUST00000179050 108 ntBASIC5.18□□□□□ -1.58
Trim41Q5NCC3 Gm25359-201ENSMUST00000179315 108 ntBASIC5.18□□□□□ -1.58
Trim41Q5NCC3 Gm22624-201ENSMUST00000179913 108 ntBASIC5.18□□□□□ -1.58
Trim41Q5NCC3 Mir7017-201ENSMUST00000184894 62 ntBASIC5.18□□□□□ -1.58
Trim41Q5NCC3 Gm44482-201ENSMUST00000199232 103 ntBASIC5.18□□□□□ -1.58
Trim41Q5NCC3 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC5.18□□□□□ -1.58
Trim41Q5NCC3 n-R5s220-201ENSMUST00000082926 120 ntBASIC5.18□□□□□ -1.58
Trim41Q5NCC3 AF357341-201ENSMUST00000083088 75 ntBASIC5.18□□□□□ -1.58
Trim41Q5NCC3 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Trim41Q5NCC3 Gm23063-201ENSMUST00000102350 93 ntBASIC5.17□□□□□ -1.58
Trim41Q5NCC3 Mir1187-201ENSMUST00000116936 122 ntBASIC5.17□□□□□ -1.58
Trim41Q5NCC3 Gm13868-201ENSMUST00000122411 294 ntBASIC5.17□□□□□ -1.58
Trim41Q5NCC3 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC5.17□□□□□ -1.58
Trim41Q5NCC3 AC124549.2-201ENSMUST00000224243 222 ntBASIC5.17□□□□□ -1.58
Trim41Q5NCC3 AC132833.2-201ENSMUST00000228699 157 ntBASIC5.17□□□□□ -1.58
Trim41Q5NCC3 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC5.17□□□□□ -1.58
Trim41Q5NCC3 AC157570.1-201ENSMUST00000218052 3778 ntBASIC5.17□□□□□ -1.58
Trim41Q5NCC3 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC5.17□□□□□ -1.58
Trim41Q5NCC3 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Trim41Q5NCC3 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Trim41Q5NCC3 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Trim41Q5NCC3 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Trim41Q5NCC3 Gm22270-201ENSMUST00000104034 132 ntBASIC5.16□□□□□ -1.58
Trim41Q5NCC3 Gm26425-201ENSMUST00000122529 82 ntBASIC5.16□□□□□ -1.58
Trim41Q5NCC3 Gm23369-201ENSMUST00000175406 105 ntBASIC5.16□□□□□ -1.58
Trim41Q5NCC3 Mir6406-201ENSMUST00000183592 120 ntBASIC5.16□□□□□ -1.58
Trim41Q5NCC3 Gm23293-201ENSMUST00000082552 104 ntBASIC5.16□□□□□ -1.58
Trim41Q5NCC3 Gm24527-201ENSMUST00000082920 107 ntBASIC5.16□□□□□ -1.58
Trim41Q5NCC3 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC5.16□□□□□ -1.58
Trim41Q5NCC3 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Trim41Q5NCC3 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC5.15□□□□□ -1.58
Trim41Q5NCC3 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Trim41Q5NCC3 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Trim41Q5NCC3 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Trim41Q5NCC3 Gm24126-201ENSMUST00000104111 106 ntBASIC5.14□□□□□ -1.59
Trim41Q5NCC3 Gm24632-201ENSMUST00000122770 323 ntBASIC5.14□□□□□ -1.59
Trim41Q5NCC3 Gm23588-201ENSMUST00000157659 99 ntBASIC5.14□□□□□ -1.59
Trim41Q5NCC3 Gm22706-201ENSMUST00000157907 112 ntBASIC5.14□□□□□ -1.59
Trim41Q5NCC3 Mir7026-201ENSMUST00000184384 67 ntBASIC5.14□□□□□ -1.59
Trim41Q5NCC3 n-R5s176-201ENSMUST00000082683 109 ntBASIC5.14□□□□□ -1.59
Trim41Q5NCC3 Gm26494-201ENSMUST00000083154 143 ntBASIC5.14□□□□□ -1.59
Trim41Q5NCC3 Gm24493-201ENSMUST00000083805 143 ntBASIC5.14□□□□□ -1.59
Trim41Q5NCC3 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Trim41Q5NCC3 Gm13136-201ENSMUST00000121031 2950 ntBASIC5.14□□□□□ -1.59
Trim41Q5NCC3 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Trim41Q5NCC3 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Trim41Q5NCC3 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Trim41Q5NCC3 Gm8935-201ENSMUST00000066794 2798 ntBASIC5.13□□□□□ -1.59
Trim41Q5NCC3 Gm23898-201ENSMUST00000158111 103 ntBASIC5.13□□□□□ -1.59
Trim41Q5NCC3 AC167721.1-201ENSMUST00000217088 279 ntBASIC5.13□□□□□ -1.59
Trim41Q5NCC3 AC158631.1-201ENSMUST00000219202 138 ntBASIC5.13□□□□□ -1.59
Trim41Q5NCC3 AC134596.2-201ENSMUST00000222158 171 ntBASIC5.13□□□□□ -1.59
Trim41Q5NCC3 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trim41Q5NCC3 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Trim41Q5NCC3 Gm22332-201ENSMUST00000158072 126 ntBASIC5.12□□□□□ -1.59
Trim41Q5NCC3 Mir5123-201ENSMUST00000177794 83 ntBASIC5.12□□□□□ -1.59
Trim41Q5NCC3 Gm23714-201ENSMUST00000179259 105 ntBASIC5.12□□□□□ -1.59
Trim41Q5NCC3 Gm27648-201ENSMUST00000184315 107 ntBASIC5.12□□□□□ -1.59
Trim41Q5NCC3 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC5.12□□□□□ -1.59
Trim41Q5NCC3 Gm26077-201ENSMUST00000104064 123 ntBASIC5.11□□□□□ -1.59
Trim41Q5NCC3 Gm24061-201ENSMUST00000157489 120 ntBASIC5.11□□□□□ -1.59
Trim41Q5NCC3 Gm22387-201ENSMUST00000158191 131 ntBASIC5.11□□□□□ -1.59
Trim41Q5NCC3 Gm23289-201ENSMUST00000175615 108 ntBASIC5.11□□□□□ -1.59
Trim41Q5NCC3 Gm24674-201ENSMUST00000179194 104 ntBASIC5.11□□□□□ -1.59
Trim41Q5NCC3 Gm44703-201ENSMUST00000205724 248 ntBASIC5.11□□□□□ -1.59
Trim41Q5NCC3 Hmgb1l-201ENSMUST00000082150 571 ntBASIC5.11□□□□□ -1.59
Trim41Q5NCC3 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Trim41Q5NCC3 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Trim41Q5NCC3 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Trim41Q5NCC3 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trim41Q5NCC3 Gm14882-201ENSMUST00000117216 218 ntBASIC5.1□□□□□ -1.59
Trim41Q5NCC3 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC5.1□□□□□ -1.59
Trim41Q5NCC3 Gm34314-201ENSMUST00000203622 367 ntBASIC5.1□□□□□ -1.59
Trim41Q5NCC3 Gm43879-201ENSMUST00000203811 3760 ntBASIC5.1□□□□□ -1.59
Trim41Q5NCC3 AC140930.2-201ENSMUST00000221803 109 ntBASIC5.1□□□□□ -1.59
Trim41Q5NCC3 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Trim41Q5NCC3 Gm45130-201ENSMUST00000207574 3388 ntBASIC5.09□□□□□ -1.59
Trim41Q5NCC3 Gm23347-201ENSMUST00000083823 82 ntBASIC5.09□□□□□ -1.59
Trim41Q5NCC3 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Trim41Q5NCC3 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Trim41Q5NCC3 AC158979.1-201ENSMUST00000223594 2252 ntBASIC5.08□□□□□ -1.6
Trim41Q5NCC3 Gm23980-201ENSMUST00000157135 158 ntBASIC5.08□□□□□ -1.6
Trim41Q5NCC3 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC5.08□□□□□ -1.6
Trim41Q5NCC3 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC5.08□□□□□ -1.6
Trim41Q5NCC3 AC098718.1-201ENSMUST00000226166 175 ntBASIC5.08□□□□□ -1.6
Trim41Q5NCC3 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Trim41Q5NCC3 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC5.07□□□□□ -1.6
Trim41Q5NCC3 Mir124a-3-201ENSMUST00000083520 68 ntBASIC5.07□□□□□ -1.6
Trim41Q5NCC3 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim41Q5NCC3 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Trim41Q5NCC3 Gm14937-201ENSMUST00000119709 208 ntBASIC5.06□□□□□ -1.6
Trim41Q5NCC3 Gm24210-201ENSMUST00000158263 133 ntBASIC5.06□□□□□ -1.6
Trim41Q5NCC3 Traj61-201ENSMUST00000165025 72 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 335.3 ms