Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm44282-201ENSMUST00000203199 190 ntBASIC-1.73□□□□□ -2.69
Ccdc88bQ4QRL3 Gm22577-201ENSMUST00000083731 109 ntBASIC-1.73□□□□□ -2.69
Ccdc88bQ4QRL3 Gm24625-201ENSMUST00000082622 130 ntBASIC-1.74□□□□□ -2.69
Ccdc88bQ4QRL3 Gm24277-201ENSMUST00000158661 104 ntBASIC-1.75□□□□□ -2.69
Ccdc88bQ4QRL3 Gm23921-201ENSMUST00000175258 107 ntBASIC-1.75□□□□□ -2.69
Ccdc88bQ4QRL3 Gm24168-201ENSMUST00000178825 107 ntBASIC-1.75□□□□□ -2.69
Ccdc88bQ4QRL3 Gm43563-201ENSMUST00000196761 198 ntBASIC-1.75□□□□□ -2.69
Ccdc88bQ4QRL3 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC-1.75□□□□□ -2.69
Ccdc88bQ4QRL3 Snord57-201ENSMUST00000083338 72 ntBASIC-1.75□□□□□ -2.69
Ccdc88bQ4QRL3 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC-1.75□□□□□ -2.69
Ccdc88bQ4QRL3 Gm4076-201ENSMUST00000179230 965 ntBASIC-1.75□□□□□ -2.69
Ccdc88bQ4QRL3 AC192616.3-201ENSMUST00000220797 1124 ntBASIC-1.75□□□□□ -2.69
Ccdc88bQ4QRL3 AC159093.2-201ENSMUST00000227881 297 ntBASIC-1.75□□□□□ -2.69
Ccdc88bQ4QRL3 Defb44-ps-201ENSMUST00000126871 219 ntBASIC-1.76□□□□□ -2.69
Ccdc88bQ4QRL3 Gm25600-201ENSMUST00000158357 106 ntBASIC-1.76□□□□□ -2.69
Ccdc88bQ4QRL3 Ighv1-32-201ENSMUST00000195149 351 ntBASIC-1.76□□□□□ -2.69
Ccdc88bQ4QRL3 Gm43556-201ENSMUST00000196186 681 ntBASIC-1.76□□□□□ -2.69
Ccdc88bQ4QRL3 Gm44300-201ENSMUST00000196792 121 ntBASIC-1.76□□□□□ -2.69
Ccdc88bQ4QRL3 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC-1.76□□□□□ -2.69
Ccdc88bQ4QRL3 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC-1.77□□□□□ -2.69
Ccdc88bQ4QRL3 Gm22281-201ENSMUST00000157198 103 ntBASIC-1.77□□□□□ -2.69
Ccdc88bQ4QRL3 Gm24000-201ENSMUST00000158063 89 ntBASIC-1.77□□□□□ -2.69
Ccdc88bQ4QRL3 Gm22385-201ENSMUST00000158189 101 ntBASIC-1.77□□□□□ -2.69
Ccdc88bQ4QRL3 Gm28648-201ENSMUST00000190092 343 ntBASIC-1.77□□□□□ -2.69
Ccdc88bQ4QRL3 Gm43943-201ENSMUST00000204201 113 ntBASIC-1.77□□□□□ -2.69
Ccdc88bQ4QRL3 Gm45429-201ENSMUST00000209527 172 ntBASIC-1.77□□□□□ -2.69
Ccdc88bQ4QRL3 Gm23645-201ENSMUST00000083228 108 ntBASIC-1.77□□□□□ -2.69
Ccdc88bQ4QRL3 Gm24927-201ENSMUST00000083397 107 ntBASIC-1.77□□□□□ -2.69
Ccdc88bQ4QRL3 Gm25040-201ENSMUST00000103877 66 ntBASIC-1.78□□□□□ -2.69
Ccdc88bQ4QRL3 Gm23441-201ENSMUST00000157268 127 ntBASIC-1.78□□□□□ -2.69
Ccdc88bQ4QRL3 Gm10548-202ENSMUST00000165672 272 ntBASIC-1.78□□□□□ -2.69
Ccdc88bQ4QRL3 Gm24336-201ENSMUST00000104203 146 ntBASIC-1.79□□□□□ -2.7
Ccdc88bQ4QRL3 Gm14989-201ENSMUST00000120497 207 ntBASIC-1.79□□□□□ -2.7
Ccdc88bQ4QRL3 Gm22085-201ENSMUST00000158344 110 ntBASIC-1.79□□□□□ -2.7
Ccdc88bQ4QRL3 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC-1.79□□□□□ -2.7
Ccdc88bQ4QRL3 Gm12255-201ENSMUST00000117184 284 ntBASIC-1.8□□□□□ -2.7
Ccdc88bQ4QRL3 Gm14919-201ENSMUST00000120839 390 ntBASIC-1.8□□□□□ -2.7
Ccdc88bQ4QRL3 Trav5d-2-201ENSMUST00000196107 275 ntBASIC-1.8□□□□□ -2.7
Ccdc88bQ4QRL3 Trav5n-2-201ENSMUST00000197136 275 ntBASIC-1.8□□□□□ -2.7
Ccdc88bQ4QRL3 AC154484.1-201ENSMUST00000227311 771 ntBASIC-1.8□□□□□ -2.7
Ccdc88bQ4QRL3 Gm24283-201ENSMUST00000104233 107 ntBASIC-1.81□□□□□ -2.7
Ccdc88bQ4QRL3 Gm25915-201ENSMUST00000104265 126 ntBASIC-1.81□□□□□ -2.7
Ccdc88bQ4QRL3 Gm26051-201ENSMUST00000104642 93 ntBASIC-1.81□□□□□ -2.7
Ccdc88bQ4QRL3 Gm14906-201ENSMUST00000119265 390 ntBASIC-1.81□□□□□ -2.7
Ccdc88bQ4QRL3 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC-1.81□□□□□ -2.7
Ccdc88bQ4QRL3 Gm18729-201ENSMUST00000217230 621 ntBASIC-1.81□□□□□ -2.7
Ccdc88bQ4QRL3 AL627387.1-201ENSMUST00000226063 250 ntBASIC-1.81□□□□□ -2.7
Ccdc88bQ4QRL3 Mir532-201ENSMUST00000093630 96 ntBASIC-1.81□□□□□ -2.7
Ccdc88bQ4QRL3 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC-1.81□□□□□ -2.7
Ccdc88bQ4QRL3 Gm23715-201ENSMUST00000157354 106 ntBASIC-1.82□□□□□ -2.7
Ccdc88bQ4QRL3 Gm26007-201ENSMUST00000158798 120 ntBASIC-1.82□□□□□ -2.7
Ccdc88bQ4QRL3 Gm25693-201ENSMUST00000175443 85 ntBASIC-1.82□□□□□ -2.7
Ccdc88bQ4QRL3 Gm25464-201ENSMUST00000175481 107 ntBASIC-1.82□□□□□ -2.7
Ccdc88bQ4QRL3 Gm44807-201ENSMUST00000206115 154 ntBASIC-1.82□□□□□ -2.7
Ccdc88bQ4QRL3 AC123656.2-201ENSMUST00000226726 227 ntBASIC-1.82□□□□□ -2.7
Ccdc88bQ4QRL3 Gm26062-201ENSMUST00000083379 107 ntBASIC-1.82□□□□□ -2.7
Ccdc88bQ4QRL3 Mir350-201ENSMUST00000083639 99 ntBASIC-1.82□□□□□ -2.7
Ccdc88bQ4QRL3 Gm24509-201ENSMUST00000157086 101 ntBASIC-1.82□□□□□ -2.7
Ccdc88bQ4QRL3 Gm25358-201ENSMUST00000157189 101 ntBASIC-1.82□□□□□ -2.7
Ccdc88bQ4QRL3 Gm24290-201ENSMUST00000157634 96 ntBASIC-1.82□□□□□ -2.7
Ccdc88bQ4QRL3 Gm26371-201ENSMUST00000157829 104 ntBASIC-1.82□□□□□ -2.7
Ccdc88bQ4QRL3 Gm26090-201ENSMUST00000157897 128 ntBASIC-1.82□□□□□ -2.7
Ccdc88bQ4QRL3 Gm5023-201ENSMUST00000217442 587 ntBASIC-1.82□□□□□ -2.7
Ccdc88bQ4QRL3 AC122335.1-201ENSMUST00000217587 175 ntBASIC-1.82□□□□□ -2.7
Ccdc88bQ4QRL3 AC102291.2-201ENSMUST00000228083 367 ntBASIC-1.82□□□□□ -2.7
Ccdc88bQ4QRL3 Gm26314-201ENSMUST00000083891 107 ntBASIC-1.82□□□□□ -2.7
Ccdc88bQ4QRL3 Gm14626-201ENSMUST00000117619 216 ntBASIC-1.83□□□□□ -2.7
Ccdc88bQ4QRL3 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC-1.83□□□□□ -2.7
Ccdc88bQ4QRL3 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC-1.83□□□□□ -2.7
Ccdc88bQ4QRL3 Snord67-201ENSMUST00000104033 111 ntBASIC-1.84□□□□□ -2.7
Ccdc88bQ4QRL3 Gm24439-201ENSMUST00000157894 117 ntBASIC-1.84□□□□□ -2.7
Ccdc88bQ4QRL3 Gm25905-201ENSMUST00000158490 101 ntBASIC-1.84□□□□□ -2.7
Ccdc88bQ4QRL3 Mir1264-201ENSMUST00000175381 86 ntBASIC-1.84□□□□□ -2.7
Ccdc88bQ4QRL3 Gm44811-201ENSMUST00000209120 228 ntBASIC-1.84□□□□□ -2.7
Ccdc88bQ4QRL3 Gm19248-201ENSMUST00000209404 110 ntBASIC-1.84□□□□□ -2.7
Ccdc88bQ4QRL3 Gm24355-201ENSMUST00000082858 122 ntBASIC-1.84□□□□□ -2.7
Ccdc88bQ4QRL3 Gm24268-201ENSMUST00000082990 110 ntBASIC-1.84□□□□□ -2.7
Ccdc88bQ4QRL3 Gm24382-201ENSMUST00000122698 107 ntBASIC-1.85□□□□□ -2.71
Ccdc88bQ4QRL3 Gm23068-201ENSMUST00000158239 293 ntBASIC-1.85□□□□□ -2.71
Ccdc88bQ4QRL3 Gm23216-201ENSMUST00000179545 107 ntBASIC-1.85□□□□□ -2.71
Ccdc88bQ4QRL3 Gm27793-201ENSMUST00000183405 76 ntBASIC-1.85□□□□□ -2.71
Ccdc88bQ4QRL3 Mir7094-2-201ENSMUST00000184622 60 ntBASIC-1.85□□□□□ -2.71
Ccdc88bQ4QRL3 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC-1.85□□□□□ -2.71
Ccdc88bQ4QRL3 Mir7094-1-201ENSMUST00000199671 60 ntBASIC-1.85□□□□□ -2.71
Ccdc88bQ4QRL3 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC-1.85□□□□□ -2.71
Ccdc88bQ4QRL3 Gm25825-201ENSMUST00000157091 124 ntBASIC-1.86□□□□□ -2.71
Ccdc88bQ4QRL3 Gm29815-201ENSMUST00000202418 178 ntBASIC-1.86□□□□□ -2.71
Ccdc88bQ4QRL3 Gm45508-201ENSMUST00000209298 299 ntBASIC-1.86□□□□□ -2.71
Ccdc88bQ4QRL3 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC-1.86□□□□□ -2.71
Ccdc88bQ4QRL3 Gm23881-201ENSMUST00000116872 66 ntBASIC-1.87□□□□□ -2.71
Ccdc88bQ4QRL3 Gm13711-201ENSMUST00000119708 453 ntBASIC-1.88□□□□□ -2.71
Ccdc88bQ4QRL3 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.88□□□□□ -2.71
Ccdc88bQ4QRL3 Gm22076-201ENSMUST00000158601 84 ntBASIC-1.88□□□□□ -2.71
Ccdc88bQ4QRL3 Gm25839-201ENSMUST00000158921 103 ntBASIC-1.88□□□□□ -2.71
Ccdc88bQ4QRL3 Gm7925-201ENSMUST00000166690 401 ntBASIC-1.88□□□□□ -2.71
Ccdc88bQ4QRL3 Gm25879-201ENSMUST00000104330 107 ntBASIC-1.88□□□□□ -2.71
Ccdc88bQ4QRL3 Adgrg4-206ENSMUST00000168724 531 ntBASIC-1.88□□□□□ -2.71
Ccdc88bQ4QRL3 Gm22566-201ENSMUST00000175541 85 ntBASIC-1.88□□□□□ -2.71
Ccdc88bQ4QRL3 Gm17067-202ENSMUST00000180131 123 ntBASIC-1.88□□□□□ -2.71
Ccdc88bQ4QRL3 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC-1.88□□□□□ -2.71
Retrieved 100 of 76,532 protein–RNA pairs in 252.5 ms