Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm14536-201ENSMUST00000118324 138 ntBASIC0.94□□□□□ -2.26
Upf3aQ3ULJ3 Gm16032-201ENSMUST00000118534 168 ntBASIC0.94□□□□□ -2.26
Upf3aQ3ULJ3 Gm15027-201ENSMUST00000120922 138 ntBASIC0.94□□□□□ -2.26
Upf3aQ3ULJ3 Gm13560-201ENSMUST00000121865 329 ntBASIC0.94□□□□□ -2.26
Upf3aQ3ULJ3 Gm23101-201ENSMUST00000157550 137 ntBASIC0.94□□□□□ -2.26
Upf3aQ3ULJ3 Gm22403-201ENSMUST00000174919 84 ntBASIC0.94□□□□□ -2.26
Upf3aQ3ULJ3 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
Upf3aQ3ULJ3 Gm43563-201ENSMUST00000196761 198 ntBASIC0.94□□□□□ -2.26
Upf3aQ3ULJ3 Snora41-201ENSMUST00000082668 132 ntBASIC0.94□□□□□ -2.26
Upf3aQ3ULJ3 Gm22421-201ENSMUST00000083058 107 ntBASIC0.94□□□□□ -2.26
Upf3aQ3ULJ3 Gm25627-201ENSMUST00000084003 153 ntBASIC0.94□□□□□ -2.26
Upf3aQ3ULJ3 Mir490-201ENSMUST00000093567 84 ntBASIC0.94□□□□□ -2.26
Upf3aQ3ULJ3 AC164297.1-201ENSMUST00000224484 1561 ntBASIC0.93□□□□□ -2.26
Upf3aQ3ULJ3 Gm11334-201ENSMUST00000121969 156 ntBASIC0.93□□□□□ -2.26
Upf3aQ3ULJ3 Gm22097-201ENSMUST00000157929 278 ntBASIC0.93□□□□□ -2.26
Upf3aQ3ULJ3 Gm24808-201ENSMUST00000157993 118 ntBASIC0.93□□□□□ -2.26
Upf3aQ3ULJ3 Gm22118-201ENSMUST00000175593 171 ntBASIC0.93□□□□□ -2.26
Upf3aQ3ULJ3 Gm27587-201ENSMUST00000185116 163 ntBASIC0.93□□□□□ -2.26
Upf3aQ3ULJ3 Gm21088-201ENSMUST00000190875 316 ntBASIC0.93□□□□□ -2.26
Upf3aQ3ULJ3 Gm44373-201ENSMUST00000196112 169 ntBASIC0.93□□□□□ -2.26
Upf3aQ3ULJ3 Gm44959-201ENSMUST00000209127 231 ntBASIC0.93□□□□□ -2.26
Upf3aQ3ULJ3 Gm26224-201ENSMUST00000082506 80 ntBASIC0.93□□□□□ -2.26
Upf3aQ3ULJ3 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.92□□□□□ -2.26
Upf3aQ3ULJ3 Gm23898-201ENSMUST00000158111 103 ntBASIC0.92□□□□□ -2.26
Upf3aQ3ULJ3 Gm22425-201ENSMUST00000158532 138 ntBASIC0.92□□□□□ -2.26
Upf3aQ3ULJ3 Gm23194-201ENSMUST00000158813 105 ntBASIC0.92□□□□□ -2.26
Upf3aQ3ULJ3 Gm25166-201ENSMUST00000158909 111 ntBASIC0.92□□□□□ -2.26
Upf3aQ3ULJ3 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.92□□□□□ -2.26
Upf3aQ3ULJ3 Gm25750-201ENSMUST00000175483 112 ntBASIC0.92□□□□□ -2.26
Upf3aQ3ULJ3 Gm29140-201ENSMUST00000190187 476 ntBASIC0.92□□□□□ -2.26
Upf3aQ3ULJ3 Gm45313-201ENSMUST00000210584 178 ntBASIC0.92□□□□□ -2.26
Upf3aQ3ULJ3 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.92□□□□□ -2.26
Upf3aQ3ULJ3 Gm22571-201ENSMUST00000082984 70 ntBASIC0.92□□□□□ -2.26
Upf3aQ3ULJ3 Gm22469-201ENSMUST00000104118 133 ntBASIC0.91□□□□□ -2.26
Upf3aQ3ULJ3 Gm11904-201ENSMUST00000120562 248 ntBASIC0.91□□□□□ -2.26
Upf3aQ3ULJ3 Gm23106-201ENSMUST00000157554 101 ntBASIC0.91□□□□□ -2.26
Upf3aQ3ULJ3 Gm23665-201ENSMUST00000158054 62 ntBASIC0.91□□□□□ -2.26
Upf3aQ3ULJ3 Gm20923-201ENSMUST00000190009 319 ntBASIC0.91□□□□□ -2.26
Upf3aQ3ULJ3 Gm42533-201ENSMUST00000196247 157 ntBASIC0.91□□□□□ -2.26
Upf3aQ3ULJ3 Gm44055-201ENSMUST00000204376 247 ntBASIC0.91□□□□□ -2.26
Upf3aQ3ULJ3 AC159896.1-201ENSMUST00000215264 215 ntBASIC0.91□□□□□ -2.26
Upf3aQ3ULJ3 AC116460.1-201ENSMUST00000219040 313 ntBASIC0.91□□□□□ -2.26
Upf3aQ3ULJ3 Gm22884-201ENSMUST00000083127 140 ntBASIC0.91□□□□□ -2.26
Upf3aQ3ULJ3 Mir34a-201ENSMUST00000083559 102 ntBASIC0.91□□□□□ -2.26
Upf3aQ3ULJ3 Gm14914-201ENSMUST00000117576 2031 ntBASIC0.9□□□□□ -2.27
Upf3aQ3ULJ3 Gm25416-201ENSMUST00000104221 107 ntBASIC0.9□□□□□ -2.27
Upf3aQ3ULJ3 Gm25663-201ENSMUST00000157698 135 ntBASIC0.9□□□□□ -2.27
Upf3aQ3ULJ3 Gm23579-201ENSMUST00000158528 103 ntBASIC0.9□□□□□ -2.27
Upf3aQ3ULJ3 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC0.9□□□□□ -2.27
Upf3aQ3ULJ3 Gm28921-201ENSMUST00000190219 378 ntBASIC0.9□□□□□ -2.27
Upf3aQ3ULJ3 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.9□□□□□ -2.27
Upf3aQ3ULJ3 Gm38274-201ENSMUST00000195689 148 ntBASIC0.9□□□□□ -2.27
Upf3aQ3ULJ3 Snora19-201ENSMUST00000082962 132 ntBASIC0.9□□□□□ -2.27
Upf3aQ3ULJ3 Gm23658-201ENSMUST00000083233 132 ntBASIC0.9□□□□□ -2.27
Upf3aQ3ULJ3 Gm23347-201ENSMUST00000083823 82 ntBASIC0.9□□□□□ -2.27
Upf3aQ3ULJ3 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
Upf3aQ3ULJ3 Gm23542-201ENSMUST00000158208 96 ntBASIC0.89□□□□□ -2.27
Upf3aQ3ULJ3 Gm22450-201ENSMUST00000179641 107 ntBASIC0.89□□□□□ -2.27
Upf3aQ3ULJ3 Gm25473-201ENSMUST00000180191 107 ntBASIC0.89□□□□□ -2.27
Upf3aQ3ULJ3 Gm27420-201ENSMUST00000183823 79 ntBASIC0.89□□□□□ -2.27
Upf3aQ3ULJ3 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
Upf3aQ3ULJ3 AC154994.1-201ENSMUST00000217395 302 ntBASIC0.89□□□□□ -2.27
Upf3aQ3ULJ3 CT010454.1-201ENSMUST00000225975 265 ntBASIC0.89□□□□□ -2.27
Upf3aQ3ULJ3 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
Upf3aQ3ULJ3 Gm23299-201ENSMUST00000082708 79 ntBASIC0.89□□□□□ -2.27
Upf3aQ3ULJ3 Gm24856-201ENSMUST00000082809 107 ntBASIC0.89□□□□□ -2.27
Upf3aQ3ULJ3 Gm26071-201ENSMUST00000083261 107 ntBASIC0.89□□□□□ -2.27
Upf3aQ3ULJ3 Gm24453-201ENSMUST00000083346 76 ntBASIC0.89□□□□□ -2.27
Upf3aQ3ULJ3 Gm22743-201ENSMUST00000083445 133 ntBASIC0.89□□□□□ -2.27
Upf3aQ3ULJ3 Gm24521-201ENSMUST00000083958 107 ntBASIC0.89□□□□□ -2.27
Upf3aQ3ULJ3 Gm24431-201ENSMUST00000104073 66 ntBASIC0.88□□□□□ -2.27
Upf3aQ3ULJ3 Mir875-201ENSMUST00000104698 78 ntBASIC0.88□□□□□ -2.27
Upf3aQ3ULJ3 Gm23113-201ENSMUST00000158477 99 ntBASIC0.88□□□□□ -2.27
Upf3aQ3ULJ3 Gm23571-201ENSMUST00000180073 127 ntBASIC0.88□□□□□ -2.27
Upf3aQ3ULJ3 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC0.88□□□□□ -2.27
Upf3aQ3ULJ3 Snord35a-201ENSMUST00000083884 90 ntBASIC0.88□□□□□ -2.27
Upf3aQ3ULJ3 Gm10222-201ENSMUST00000088336 294 ntBASIC0.88□□□□□ -2.27
Upf3aQ3ULJ3 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
Upf3aQ3ULJ3 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
Upf3aQ3ULJ3 Gm23996-201ENSMUST00000158062 131 ntBASIC0.87□□□□□ -2.27
Upf3aQ3ULJ3 Mir3109-201ENSMUST00000175301 88 ntBASIC0.87□□□□□ -2.27
Upf3aQ3ULJ3 Gm25024-201ENSMUST00000179667 104 ntBASIC0.87□□□□□ -2.27
Upf3aQ3ULJ3 Gm27747-201ENSMUST00000184707 85 ntBASIC0.87□□□□□ -2.27
Upf3aQ3ULJ3 Gm29022-201ENSMUST00000190702 225 ntBASIC0.87□□□□□ -2.27
Upf3aQ3ULJ3 Gm24920-201ENSMUST00000083018 85 ntBASIC0.87□□□□□ -2.27
Upf3aQ3ULJ3 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
Upf3aQ3ULJ3 Gm24375-201ENSMUST00000104397 132 ntBASIC0.86□□□□□ -2.27
Upf3aQ3ULJ3 Gm12797-201ENSMUST00000118645 273 ntBASIC0.86□□□□□ -2.27
Upf3aQ3ULJ3 Gm25664-201ENSMUST00000157697 107 ntBASIC0.86□□□□□ -2.27
Upf3aQ3ULJ3 Gm23581-201ENSMUST00000158531 63 ntBASIC0.86□□□□□ -2.27
Upf3aQ3ULJ3 CT033781.2-201ENSMUST00000221113 153 ntBASIC0.86□□□□□ -2.27
Upf3aQ3ULJ3 Gm24523-201ENSMUST00000083965 132 ntBASIC0.86□□□□□ -2.27
Upf3aQ3ULJ3 Gm25111-201ENSMUST00000116686 147 ntBASIC0.85□□□□□ -2.27
Upf3aQ3ULJ3 Gm11322-201ENSMUST00000118095 435 ntBASIC0.85□□□□□ -2.27
Upf3aQ3ULJ3 Gm11856-201ENSMUST00000118712 276 ntBASIC0.85□□□□□ -2.27
Upf3aQ3ULJ3 Gm13577-201ENSMUST00000121365 205 ntBASIC0.85□□□□□ -2.27
Upf3aQ3ULJ3 Gm26287-201ENSMUST00000158887 81 ntBASIC0.85□□□□□ -2.27
Upf3aQ3ULJ3 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.85□□□□□ -2.27
Upf3aQ3ULJ3 Gm28344-201ENSMUST00000185704 279 ntBASIC0.85□□□□□ -2.27
Upf3aQ3ULJ3 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 104.8 ms