Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm25697-201ENSMUST00000082902 98 ntBASIC1.19□□□□□ -2.22
Trafd1Q3UDK1 Gm25627-201ENSMUST00000084003 153 ntBASIC1.19□□□□□ -2.22
Trafd1Q3UDK1 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Trafd1Q3UDK1 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Trafd1Q3UDK1 Gm22780-201ENSMUST00000104084 132 ntBASIC1.18□□□□□ -2.22
Trafd1Q3UDK1 Gm11792-201ENSMUST00000120640 168 ntBASIC1.18□□□□□ -2.22
Trafd1Q3UDK1 Gm26363-201ENSMUST00000158866 83 ntBASIC1.18□□□□□ -2.22
Trafd1Q3UDK1 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.18□□□□□ -2.22
Trafd1Q3UDK1 Gm23047-201ENSMUST00000177661 94 ntBASIC1.18□□□□□ -2.22
Trafd1Q3UDK1 Mir6240-201ENSMUST00000184281 117 ntBASIC1.18□□□□□ -2.22
Trafd1Q3UDK1 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC1.18□□□□□ -2.22
Trafd1Q3UDK1 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.18□□□□□ -2.22
Trafd1Q3UDK1 AC154390.1-201ENSMUST00000225629 277 ntBASIC1.18□□□□□ -2.22
Trafd1Q3UDK1 Gm24762-201ENSMUST00000083689 104 ntBASIC1.18□□□□□ -2.22
Trafd1Q3UDK1 Rny1-201ENSMUST00000083767 112 ntBASIC1.18□□□□□ -2.22
Trafd1Q3UDK1 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
Trafd1Q3UDK1 Mir541-201ENSMUST00000102097 90 ntBASIC1.17□□□□□ -2.22
Trafd1Q3UDK1 Gm25274-201ENSMUST00000104296 135 ntBASIC1.17□□□□□ -2.22
Trafd1Q3UDK1 Gm24375-201ENSMUST00000104397 132 ntBASIC1.17□□□□□ -2.22
Trafd1Q3UDK1 Gm22673-201ENSMUST00000104415 131 ntBASIC1.17□□□□□ -2.22
Trafd1Q3UDK1 Gm13801-201ENSMUST00000120750 160 ntBASIC1.17□□□□□ -2.22
Trafd1Q3UDK1 Gm13797-201ENSMUST00000121792 120 ntBASIC1.17□□□□□ -2.22
Trafd1Q3UDK1 Gm23170-201ENSMUST00000157158 106 ntBASIC1.17□□□□□ -2.22
Trafd1Q3UDK1 Gm23083-201ENSMUST00000157851 116 ntBASIC1.17□□□□□ -2.22
Trafd1Q3UDK1 Gm23898-201ENSMUST00000158111 103 ntBASIC1.17□□□□□ -2.22
Trafd1Q3UDK1 Gm23113-201ENSMUST00000158477 99 ntBASIC1.17□□□□□ -2.22
Trafd1Q3UDK1 Gm22433-201ENSMUST00000158550 142 ntBASIC1.17□□□□□ -2.22
Trafd1Q3UDK1 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC1.17□□□□□ -2.22
Trafd1Q3UDK1 Gm28409-201ENSMUST00000187064 103 ntBASIC1.17□□□□□ -2.22
Trafd1Q3UDK1 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC1.17□□□□□ -2.22
Trafd1Q3UDK1 Mir146-201ENSMUST00000083667 65 ntBASIC1.17□□□□□ -2.22
Trafd1Q3UDK1 Gm25495-201ENSMUST00000104431 131 ntBASIC1.16□□□□□ -2.22
Trafd1Q3UDK1 Gm23907-201ENSMUST00000104595 189 ntBASIC1.16□□□□□ -2.22
Trafd1Q3UDK1 Gm26301-201ENSMUST00000104813 95 ntBASIC1.16□□□□□ -2.22
Trafd1Q3UDK1 Gm24835-201ENSMUST00000116777 111 ntBASIC1.16□□□□□ -2.22
Trafd1Q3UDK1 Gm16032-201ENSMUST00000118534 168 ntBASIC1.16□□□□□ -2.22
Trafd1Q3UDK1 Gm26026-201ENSMUST00000122726 123 ntBASIC1.16□□□□□ -2.22
Trafd1Q3UDK1 Gm22145-201ENSMUST00000157396 148 ntBASIC1.16□□□□□ -2.22
Trafd1Q3UDK1 Gm23329-201ENSMUST00000157415 108 ntBASIC1.16□□□□□ -2.22
Trafd1Q3UDK1 Mir1967-201ENSMUST00000157789 82 ntBASIC1.16□□□□□ -2.22
Trafd1Q3UDK1 Gm22553-201ENSMUST00000157797 295 ntBASIC1.16□□□□□ -2.22
Trafd1Q3UDK1 Gm26029-201ENSMUST00000158659 132 ntBASIC1.16□□□□□ -2.22
Trafd1Q3UDK1 Gm27711-201ENSMUST00000183802 118 ntBASIC1.16□□□□□ -2.22
Trafd1Q3UDK1 Mir7675-201ENSMUST00000184262 58 ntBASIC1.16□□□□□ -2.22
Trafd1Q3UDK1 Gm38183-201ENSMUST00000193189 205 ntBASIC1.16□□□□□ -2.22
Trafd1Q3UDK1 Gm43602-201ENSMUST00000196772 300 ntBASIC1.16□□□□□ -2.22
Trafd1Q3UDK1 Gm25634-201ENSMUST00000082667 105 ntBASIC1.16□□□□□ -2.22
Trafd1Q3UDK1 Mir490-201ENSMUST00000093567 84 ntBASIC1.16□□□□□ -2.22
Trafd1Q3UDK1 Gm11204-201ENSMUST00000122438 147 ntBASIC1.15□□□□□ -2.23
Trafd1Q3UDK1 Gm25976-201ENSMUST00000158695 130 ntBASIC1.15□□□□□ -2.23
Trafd1Q3UDK1 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
Trafd1Q3UDK1 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
Trafd1Q3UDK1 Mir196b-201ENSMUST00000083509 85 ntBASIC1.15□□□□□ -2.23
Trafd1Q3UDK1 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
Trafd1Q3UDK1 Gm12815-201ENSMUST00000121737 135 ntBASIC1.14□□□□□ -2.23
Trafd1Q3UDK1 Gm23328-201ENSMUST00000157418 132 ntBASIC1.14□□□□□ -2.23
Trafd1Q3UDK1 Gm25423-201ENSMUST00000157609 107 ntBASIC1.14□□□□□ -2.23
Trafd1Q3UDK1 Gm26089-201ENSMUST00000157898 107 ntBASIC1.14□□□□□ -2.23
Trafd1Q3UDK1 Gm23277-201ENSMUST00000157914 136 ntBASIC1.14□□□□□ -2.23
Trafd1Q3UDK1 Gm23892-201ENSMUST00000158105 130 ntBASIC1.14□□□□□ -2.23
Trafd1Q3UDK1 Gm25015-201ENSMUST00000158400 128 ntBASIC1.14□□□□□ -2.23
Trafd1Q3UDK1 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC1.14□□□□□ -2.23
Trafd1Q3UDK1 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
Trafd1Q3UDK1 Gm45508-201ENSMUST00000209298 299 ntBASIC1.14□□□□□ -2.23
Trafd1Q3UDK1 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.14□□□□□ -2.23
Trafd1Q3UDK1 AC154994.1-201ENSMUST00000217395 302 ntBASIC1.14□□□□□ -2.23
Trafd1Q3UDK1 AC154213.2-201ENSMUST00000227138 187 ntBASIC1.14□□□□□ -2.23
Trafd1Q3UDK1 Gm22306-201ENSMUST00000082692 107 ntBASIC1.14□□□□□ -2.23
Trafd1Q3UDK1 Gm24252-201ENSMUST00000083700 132 ntBASIC1.14□□□□□ -2.23
Trafd1Q3UDK1 n-R5s183-201ENSMUST00000083939 115 ntBASIC1.14□□□□□ -2.23
Trafd1Q3UDK1 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Trafd1Q3UDK1 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.13□□□□□ -2.23
Trafd1Q3UDK1 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.13□□□□□ -2.23
Trafd1Q3UDK1 Mir544-201ENSMUST00000103813 78 ntBASIC1.13□□□□□ -2.23
Trafd1Q3UDK1 Mir466b-8-201ENSMUST00000103883 86 ntBASIC1.13□□□□□ -2.23
Trafd1Q3UDK1 Gm6897-201ENSMUST00000117714 138 ntBASIC1.13□□□□□ -2.23
Trafd1Q3UDK1 Gm14758-201ENSMUST00000119104 138 ntBASIC1.13□□□□□ -2.23
Trafd1Q3UDK1 Mir1904-201ENSMUST00000122702 80 ntBASIC1.13□□□□□ -2.23
Trafd1Q3UDK1 Gm27579-201ENSMUST00000158113 63 ntBASIC1.13□□□□□ -2.23
Trafd1Q3UDK1 Gm22944-201ENSMUST00000158662 133 ntBASIC1.13□□□□□ -2.23
Trafd1Q3UDK1 Gm27476-201ENSMUST00000183366 104 ntBASIC1.13□□□□□ -2.23
Trafd1Q3UDK1 Mir6350-201ENSMUST00000183639 105 ntBASIC1.13□□□□□ -2.23
Trafd1Q3UDK1 Gm29613-201ENSMUST00000185846 313 ntBASIC1.13□□□□□ -2.23
Trafd1Q3UDK1 Gm29544-201ENSMUST00000188860 313 ntBASIC1.13□□□□□ -2.23
Trafd1Q3UDK1 Gm28808-201ENSMUST00000190978 313 ntBASIC1.13□□□□□ -2.23
Trafd1Q3UDK1 Gm44326-201ENSMUST00000198226 101 ntBASIC1.13□□□□□ -2.23
Trafd1Q3UDK1 Mir466e-201ENSMUST00000198862 84 ntBASIC1.13□□□□□ -2.23
Trafd1Q3UDK1 Mir466c-1-201ENSMUST00000200654 84 ntBASIC1.13□□□□□ -2.23
Trafd1Q3UDK1 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.13□□□□□ -2.23
Trafd1Q3UDK1 Gm25142-201ENSMUST00000082698 107 ntBASIC1.13□□□□□ -2.23
Trafd1Q3UDK1 Mir34a-201ENSMUST00000083559 102 ntBASIC1.13□□□□□ -2.23
Trafd1Q3UDK1 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.13□□□□□ -2.23
Trafd1Q3UDK1 Gm12080-201ENSMUST00000119821 1883 ntBASIC1.12□□□□□ -2.23
Trafd1Q3UDK1 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.12□□□□□ -2.23
Trafd1Q3UDK1 Gm24121-201ENSMUST00000102029 106 ntBASIC1.12□□□□□ -2.23
Trafd1Q3UDK1 Gm24594-201ENSMUST00000122502 99 ntBASIC1.12□□□□□ -2.23
Trafd1Q3UDK1 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.12□□□□□ -2.23
Trafd1Q3UDK1 Gm25390-201ENSMUST00000157341 103 ntBASIC1.12□□□□□ -2.23
Trafd1Q3UDK1 Gm22586-201ENSMUST00000157507 122 ntBASIC1.12□□□□□ -2.23
Trafd1Q3UDK1 Gm24634-201ENSMUST00000158672 107 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms