Protein–RNA interactions for Protein: Q3U319

Rnf40, E3 ubiquitin-protein ligase BRE1B, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40Q3U319 AC122828.3-201ENSMUST00000223019 3915 ntBASIC3.32□□□□□ -1.88
Rnf40Q3U319 Mir878-201ENSMUST00000104680 78 ntBASIC3.32□□□□□ -1.88
Rnf40Q3U319 Gm22338-201ENSMUST00000157715 129 ntBASIC3.32□□□□□ -1.88
Rnf40Q3U319 Gm25711-201ENSMUST00000158633 128 ntBASIC3.32□□□□□ -1.88
Rnf40Q3U319 Gm22095-201ENSMUST00000158984 150 ntBASIC3.32□□□□□ -1.88
Rnf40Q3U319 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Rnf40Q3U319 Gm27189-201ENSMUST00000184119 190 ntBASIC3.32□□□□□ -1.88
Rnf40Q3U319 Gm44223-201ENSMUST00000204854 114 ntBASIC3.32□□□□□ -1.88
Rnf40Q3U319 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.32□□□□□ -1.88
Rnf40Q3U319 Gm25644-201ENSMUST00000083209 107 ntBASIC3.32□□□□□ -1.88
Rnf40Q3U319 Gm22743-201ENSMUST00000083445 133 ntBASIC3.32□□□□□ -1.88
Rnf40Q3U319 Mir301-201ENSMUST00000083655 86 ntBASIC3.32□□□□□ -1.88
Rnf40Q3U319 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
Rnf40Q3U319 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Rnf40Q3U319 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Rnf40Q3U319 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Rnf40Q3U319 Gm25847-201ENSMUST00000116793 96 ntBASIC3.31□□□□□ -1.88
Rnf40Q3U319 Gm26369-201ENSMUST00000157825 100 ntBASIC3.31□□□□□ -1.88
Rnf40Q3U319 Gm25371-201ENSMUST00000158162 101 ntBASIC3.31□□□□□ -1.88
Rnf40Q3U319 Gm22120-201ENSMUST00000175590 70 ntBASIC3.31□□□□□ -1.88
Rnf40Q3U319 Gm25817-201ENSMUST00000177758 121 ntBASIC3.31□□□□□ -1.88
Rnf40Q3U319 Gm24766-201ENSMUST00000179182 121 ntBASIC3.31□□□□□ -1.88
Rnf40Q3U319 Gm37104-201ENSMUST00000193278 196 ntBASIC3.31□□□□□ -1.88
Rnf40Q3U319 Gm37239-201ENSMUST00000193510 141 ntBASIC3.31□□□□□ -1.88
Rnf40Q3U319 Gm23925-201ENSMUST00000082471 132 ntBASIC3.31□□□□□ -1.88
Rnf40Q3U319 Snora20-201ENSMUST00000082703 128 ntBASIC3.31□□□□□ -1.88
Rnf40Q3U319 Gm25705-201ENSMUST00000083119 104 ntBASIC3.31□□□□□ -1.88
Rnf40Q3U319 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Rnf40Q3U319 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.31□□□□□ -1.88
Rnf40Q3U319 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.3□□□□□ -1.88
Rnf40Q3U319 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Rnf40Q3U319 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Rnf40Q3U319 Gm1980-201ENSMUST00000123131 2306 ntBASIC3.3□□□□□ -1.88
Rnf40Q3U319 Gm24127-201ENSMUST00000104110 130 ntBASIC3.3□□□□□ -1.88
Rnf40Q3U319 Gm26423-201ENSMUST00000104277 128 ntBASIC3.3□□□□□ -1.88
Rnf40Q3U319 Gm11704-201ENSMUST00000120031 214 ntBASIC3.3□□□□□ -1.88
Rnf40Q3U319 Gm16355-201ENSMUST00000128606 231 ntBASIC3.3□□□□□ -1.88
Rnf40Q3U319 Gm22999-201ENSMUST00000157082 88 ntBASIC3.3□□□□□ -1.88
Rnf40Q3U319 Gm26105-201ENSMUST00000157253 190 ntBASIC3.3□□□□□ -1.88
Rnf40Q3U319 Gm22888-201ENSMUST00000158640 77 ntBASIC3.3□□□□□ -1.88
Rnf40Q3U319 Snora26-201ENSMUST00000175614 121 ntBASIC3.3□□□□□ -1.88
Rnf40Q3U319 Gm44600-201ENSMUST00000208540 111 ntBASIC3.3□□□□□ -1.88
Rnf40Q3U319 Snord35b-201ENSMUST00000082833 87 ntBASIC3.3□□□□□ -1.88
Rnf40Q3U319 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Rnf40Q3U319 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Rnf40Q3U319 Gm25407-201ENSMUST00000104102 134 ntBASIC3.29□□□□□ -1.88
Rnf40Q3U319 Gm24982-201ENSMUST00000104456 132 ntBASIC3.29□□□□□ -1.88
Rnf40Q3U319 Gm25105-201ENSMUST00000122477 130 ntBASIC3.29□□□□□ -1.88
Rnf40Q3U319 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.29□□□□□ -1.88
Rnf40Q3U319 Mir6385-201ENSMUST00000184295 105 ntBASIC3.29□□□□□ -1.88
Rnf40Q3U319 Gm44478-201ENSMUST00000204875 114 ntBASIC3.29□□□□□ -1.88
Rnf40Q3U319 Gm19855-201ENSMUST00000210145 249 ntBASIC3.29□□□□□ -1.88
Rnf40Q3U319 mt-Tc-201ENSMUST00000082400 66 ntBASIC3.29□□□□□ -1.88
Rnf40Q3U319 Gm25199-201ENSMUST00000083095 104 ntBASIC3.29□□□□□ -1.88
Rnf40Q3U319 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Rnf40Q3U319 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Rnf40Q3U319 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Rnf40Q3U319 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
Rnf40Q3U319 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
Rnf40Q3U319 Gm25542-201ENSMUST00000116889 94 ntBASIC3.28□□□□□ -1.88
Rnf40Q3U319 Gm26277-201ENSMUST00000157097 152 ntBASIC3.28□□□□□ -1.88
Rnf40Q3U319 Gm23365-201ENSMUST00000175019 125 ntBASIC3.28□□□□□ -1.88
Rnf40Q3U319 Gm25960-201ENSMUST00000175110 125 ntBASIC3.28□□□□□ -1.88
Rnf40Q3U319 Gm44453-201ENSMUST00000175161 126 ntBASIC3.28□□□□□ -1.88
Rnf40Q3U319 Gm25195-201ENSMUST00000177656 126 ntBASIC3.28□□□□□ -1.88
Rnf40Q3U319 Gm42935-201ENSMUST00000202004 151 ntBASIC3.28□□□□□ -1.88
Rnf40Q3U319 AC129202.2-201ENSMUST00000225123 177 ntBASIC3.28□□□□□ -1.88
Rnf40Q3U319 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.27□□□□□ -1.89
Rnf40Q3U319 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Rnf40Q3U319 Gm23528-201ENSMUST00000104571 132 ntBASIC3.27□□□□□ -1.89
Rnf40Q3U319 Gm14811-201ENSMUST00000117070 117 ntBASIC3.27□□□□□ -1.89
Rnf40Q3U319 Gm26478-201ENSMUST00000122611 133 ntBASIC3.27□□□□□ -1.89
Rnf40Q3U319 Gm23084-201ENSMUST00000157850 114 ntBASIC3.27□□□□□ -1.89
Rnf40Q3U319 Gm26090-201ENSMUST00000157897 128 ntBASIC3.27□□□□□ -1.89
Rnf40Q3U319 Gm24314-201ENSMUST00000158274 123 ntBASIC3.27□□□□□ -1.89
Rnf40Q3U319 Gm22532-201ENSMUST00000158822 140 ntBASIC3.27□□□□□ -1.89
Rnf40Q3U319 Gm16307-201ENSMUST00000161269 210 ntBASIC3.27□□□□□ -1.89
Rnf40Q3U319 Gm44807-201ENSMUST00000206115 154 ntBASIC3.27□□□□□ -1.89
Rnf40Q3U319 AC164612.2-202ENSMUST00000216314 253 ntBASIC3.27□□□□□ -1.89
Rnf40Q3U319 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
Rnf40Q3U319 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Rnf40Q3U319 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Rnf40Q3U319 AC153950.1-201ENSMUST00000219916 3238 ntBASIC3.26□□□□□ -1.89
Rnf40Q3U319 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Rnf40Q3U319 Gm8260-201ENSMUST00000119230 353 ntBASIC3.26□□□□□ -1.89
Rnf40Q3U319 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.26□□□□□ -1.89
Rnf40Q3U319 Gm11248-201ENSMUST00000119568 201 ntBASIC3.26□□□□□ -1.89
Rnf40Q3U319 Gm25977-201ENSMUST00000158697 85 ntBASIC3.26□□□□□ -1.89
Rnf40Q3U319 Gm26005-201ENSMUST00000158802 134 ntBASIC3.26□□□□□ -1.89
Rnf40Q3U319 Gm27991-201ENSMUST00000184804 137 ntBASIC3.26□□□□□ -1.89
Rnf40Q3U319 Gm20305-201ENSMUST00000193226 177 ntBASIC3.26□□□□□ -1.89
Rnf40Q3U319 Mir29c-201ENSMUST00000083614 88 ntBASIC3.26□□□□□ -1.89
Rnf40Q3U319 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Rnf40Q3U319 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Rnf40Q3U319 Gm23865-201ENSMUST00000157723 97 ntBASIC3.25□□□□□ -1.89
Rnf40Q3U319 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Rnf40Q3U319 Gm34779-201ENSMUST00000210036 263 ntBASIC3.25□□□□□ -1.89
Rnf40Q3U319 Gm19118-201ENSMUST00000222554 98 ntBASIC3.25□□□□□ -1.89
Rnf40Q3U319 Mir451a-201ENSMUST00000093557 72 ntBASIC3.25□□□□□ -1.89
Rnf40Q3U319 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms