Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm28559-201ENSMUST00000190532 139 ntBASIC0.42□□□□□ -2.34
Trim43aQ3TL54 Gm44828-201ENSMUST00000203745 106 ntBASIC0.42□□□□□ -2.34
Trim43aQ3TL54 Gm44948-201ENSMUST00000209050 149 ntBASIC0.42□□□□□ -2.34
Trim43aQ3TL54 AC145736.2-201ENSMUST00000216305 365 ntBASIC0.42□□□□□ -2.34
Trim43aQ3TL54 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.42□□□□□ -2.34
Trim43aQ3TL54 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC0.41□□□□□ -2.34
Trim43aQ3TL54 Gm24847-201ENSMUST00000158032 108 ntBASIC0.41□□□□□ -2.34
Trim43aQ3TL54 Gm23665-201ENSMUST00000158054 62 ntBASIC0.41□□□□□ -2.34
Trim43aQ3TL54 Gm25247-201ENSMUST00000175475 90 ntBASIC0.41□□□□□ -2.34
Trim43aQ3TL54 Gm26116-201ENSMUST00000175600 77 ntBASIC0.41□□□□□ -2.34
Trim43aQ3TL54 Gm23793-201ENSMUST00000179396 117 ntBASIC0.41□□□□□ -2.34
Trim43aQ3TL54 Gm44149-201ENSMUST00000204256 226 ntBASIC0.41□□□□□ -2.34
Trim43aQ3TL54 Gm12647-201ENSMUST00000118977 265 ntBASIC0.4□□□□□ -2.35
Trim43aQ3TL54 Gm13711-201ENSMUST00000119708 453 ntBASIC0.4□□□□□ -2.35
Trim43aQ3TL54 Gm25970-201ENSMUST00000157165 86 ntBASIC0.4□□□□□ -2.35
Trim43aQ3TL54 Gm23672-201ENSMUST00000157471 107 ntBASIC0.4□□□□□ -2.35
Trim43aQ3TL54 Mir465d-201ENSMUST00000196314 58 ntBASIC0.4□□□□□ -2.35
Trim43aQ3TL54 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC0.4□□□□□ -2.35
Trim43aQ3TL54 AC154994.1-201ENSMUST00000217395 302 ntBASIC0.4□□□□□ -2.35
Trim43aQ3TL54 Gm24963-201ENSMUST00000157916 144 ntBASIC0.39□□□□□ -2.35
Trim43aQ3TL54 Gm25982-201ENSMUST00000157920 101 ntBASIC0.39□□□□□ -2.35
Trim43aQ3TL54 Gm28489-201ENSMUST00000186655 316 ntBASIC0.39□□□□□ -2.35
Trim43aQ3TL54 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.39□□□□□ -2.35
Trim43aQ3TL54 Gm23039-201ENSMUST00000083870 161 ntBASIC0.39□□□□□ -2.35
Trim43aQ3TL54 Gm22365-201ENSMUST00000093750 117 ntBASIC0.39□□□□□ -2.35
Trim43aQ3TL54 Gm26474-201ENSMUST00000116762 122 ntBASIC0.38□□□□□ -2.35
Trim43aQ3TL54 Mir1197-201ENSMUST00000117037 120 ntBASIC0.38□□□□□ -2.35
Trim43aQ3TL54 Gm11834-201ENSMUST00000122257 585 ntBASIC0.38□□□□□ -2.35
Trim43aQ3TL54 Gm14298-201ENSMUST00000139032 237 ntBASIC0.38□□□□□ -2.35
Trim43aQ3TL54 Gm16356-201ENSMUST00000143300 169 ntBASIC0.38□□□□□ -2.35
Trim43aQ3TL54 Gm23101-201ENSMUST00000157550 137 ntBASIC0.38□□□□□ -2.35
Trim43aQ3TL54 Gm25375-201ENSMUST00000158157 135 ntBASIC0.38□□□□□ -2.35
Trim43aQ3TL54 Gm23262-201ENSMUST00000158323 168 ntBASIC0.38□□□□□ -2.35
Trim43aQ3TL54 Gm23194-201ENSMUST00000158813 105 ntBASIC0.38□□□□□ -2.35
Trim43aQ3TL54 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
Trim43aQ3TL54 Gm27289-201ENSMUST00000183341 82 ntBASIC0.38□□□□□ -2.35
Trim43aQ3TL54 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC0.38□□□□□ -2.35
Trim43aQ3TL54 AC132437.1-201ENSMUST00000218308 320 ntBASIC0.38□□□□□ -2.35
Trim43aQ3TL54 CT025603.4-201ENSMUST00000225777 413 ntBASIC0.38□□□□□ -2.35
Trim43aQ3TL54 Gm15002-201ENSMUST00000118406 452 ntBASIC0.37□□□□□ -2.35
Trim43aQ3TL54 n-R5s73-201ENSMUST00000122508 107 ntBASIC0.37□□□□□ -2.35
Trim43aQ3TL54 Gm23536-201ENSMUST00000157541 134 ntBASIC0.37□□□□□ -2.35
Trim43aQ3TL54 Gm24498-201ENSMUST00000158445 102 ntBASIC0.37□□□□□ -2.35
Trim43aQ3TL54 Gm22114-201ENSMUST00000177756 107 ntBASIC0.37□□□□□ -2.35
Trim43aQ3TL54 Gm45508-201ENSMUST00000209298 299 ntBASIC0.37□□□□□ -2.35
Trim43aQ3TL54 Rny3-201ENSMUST00000083011 102 ntBASIC0.37□□□□□ -2.35
Trim43aQ3TL54 n-R5s183-201ENSMUST00000083939 115 ntBASIC0.37□□□□□ -2.35
Trim43aQ3TL54 Gm24629-201ENSMUST00000122762 89 ntBASIC0.36□□□□□ -2.35
Trim43aQ3TL54 Gm24909-201ENSMUST00000157290 280 ntBASIC0.36□□□□□ -2.35
Trim43aQ3TL54 Gm23584-201ENSMUST00000157655 129 ntBASIC0.36□□□□□ -2.35
Trim43aQ3TL54 Gm23779-201ENSMUST00000157938 64 ntBASIC0.36□□□□□ -2.35
Trim43aQ3TL54 Mir7093-201ENSMUST00000184195 101 ntBASIC0.36□□□□□ -2.35
Trim43aQ3TL54 Gm28927-201ENSMUST00000191528 272 ntBASIC0.36□□□□□ -2.35
Trim43aQ3TL54 Gm44488-201ENSMUST00000199467 119 ntBASIC0.36□□□□□ -2.35
Trim43aQ3TL54 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.36□□□□□ -2.35
Trim43aQ3TL54 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.36□□□□□ -2.35
Trim43aQ3TL54 Gm25937-201ENSMUST00000083912 107 ntBASIC0.36□□□□□ -2.35
Trim43aQ3TL54 Gm26111-201ENSMUST00000083969 106 ntBASIC0.36□□□□□ -2.35
Trim43aQ3TL54 Gm23708-201ENSMUST00000104367 123 ntBASIC0.35□□□□□ -2.35
Trim43aQ3TL54 Gm25773-201ENSMUST00000116718 127 ntBASIC0.35□□□□□ -2.35
Trim43aQ3TL54 Gm24192-201ENSMUST00000157978 145 ntBASIC0.35□□□□□ -2.35
Trim43aQ3TL54 Gm24000-201ENSMUST00000158063 89 ntBASIC0.35□□□□□ -2.35
Trim43aQ3TL54 Gm27317-201ENSMUST00000183533 95 ntBASIC0.35□□□□□ -2.35
Trim43aQ3TL54 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC0.35□□□□□ -2.35
Trim43aQ3TL54 Gm43976-201ENSMUST00000203637 235 ntBASIC0.35□□□□□ -2.35
Trim43aQ3TL54 Gm44687-201ENSMUST00000204975 235 ntBASIC0.35□□□□□ -2.35
Trim43aQ3TL54 Gm29818-201ENSMUST00000218070 165 ntBASIC0.35□□□□□ -2.35
Trim43aQ3TL54 Gm8219-201ENSMUST00000218309 242 ntBASIC0.35□□□□□ -2.35
Trim43aQ3TL54 Gm22283-201ENSMUST00000082556 161 ntBASIC0.35□□□□□ -2.35
Trim43aQ3TL54 Gm22786-201ENSMUST00000104086 122 ntBASIC0.34□□□□□ -2.36
Trim43aQ3TL54 Snord89-201ENSMUST00000104516 110 ntBASIC0.34□□□□□ -2.36
Trim43aQ3TL54 Gm14307-201ENSMUST00000118930 291 ntBASIC0.34□□□□□ -2.36
Trim43aQ3TL54 Gm14297-201ENSMUST00000129110 291 ntBASIC0.34□□□□□ -2.36
Trim43aQ3TL54 Gm16362-201ENSMUST00000135189 214 ntBASIC0.34□□□□□ -2.36
Trim43aQ3TL54 Gm25558-201ENSMUST00000158083 106 ntBASIC0.34□□□□□ -2.36
Trim43aQ3TL54 Gm24345-201ENSMUST00000158706 124 ntBASIC0.34□□□□□ -2.36
Trim43aQ3TL54 Gm24880-201ENSMUST00000158776 85 ntBASIC0.34□□□□□ -2.36
Trim43aQ3TL54 Gm16539-201ENSMUST00000160086 327 ntBASIC0.34□□□□□ -2.36
Trim43aQ3TL54 Mir7077-201ENSMUST00000183991 57 ntBASIC0.34□□□□□ -2.36
Trim43aQ3TL54 Gm27980-201ENSMUST00000184094 169 ntBASIC0.34□□□□□ -2.36
Trim43aQ3TL54 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC0.34□□□□□ -2.36
Trim43aQ3TL54 Mir3535-201ENSMUST00000197651 147 ntBASIC0.34□□□□□ -2.36
Trim43aQ3TL54 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
Trim43aQ3TL54 AC132615.1-201ENSMUST00000213873 255 ntBASIC0.34□□□□□ -2.36
Trim43aQ3TL54 AC115735.2-201ENSMUST00000227135 351 ntBASIC0.34□□□□□ -2.36
Trim43aQ3TL54 Gm26495-201ENSMUST00000083152 137 ntBASIC0.34□□□□□ -2.36
Trim43aQ3TL54 Mir500-201ENSMUST00000093600 92 ntBASIC0.34□□□□□ -2.36
Trim43aQ3TL54 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.34□□□□□ -2.36
Trim43aQ3TL54 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
Trim43aQ3TL54 Gm26303-201ENSMUST00000116845 119 ntBASIC0.33□□□□□ -2.36
Trim43aQ3TL54 Gm14946-201ENSMUST00000119859 296 ntBASIC0.33□□□□□ -2.36
Trim43aQ3TL54 Gm26152-201ENSMUST00000157427 101 ntBASIC0.33□□□□□ -2.36
Trim43aQ3TL54 Gm26073-201ENSMUST00000179906 127 ntBASIC0.33□□□□□ -2.36
Trim43aQ3TL54 Gm37338-201ENSMUST00000191986 127 ntBASIC0.33□□□□□ -2.36
Trim43aQ3TL54 Gm45616-201ENSMUST00000211711 319 ntBASIC0.33□□□□□ -2.36
Trim43aQ3TL54 Gm24208-201ENSMUST00000082783 135 ntBASIC0.33□□□□□ -2.36
Trim43aQ3TL54 Gm24616-201ENSMUST00000083274 139 ntBASIC0.33□□□□□ -2.36
Trim43aQ3TL54 Mir709-201ENSMUST00000102190 88 ntBASIC0.32□□□□□ -2.36
Trim43aQ3TL54 Gm11835-201ENSMUST00000120635 663 ntBASIC0.32□□□□□ -2.36
Trim43aQ3TL54 Gm22085-201ENSMUST00000158344 110 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 161.3 ms