Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Mir7050-201ENSMUST00000184636 60 ntBASIC2.38□□□□□ -2.03
Ccbe1Q3MI99 Gm37330-201ENSMUST00000192606 153 ntBASIC2.38□□□□□ -2.03
Ccbe1Q3MI99 Gm24350-202ENSMUST00000198309 132 ntBASIC2.38□□□□□ -2.03
Ccbe1Q3MI99 Gm45386-201ENSMUST00000210194 218 ntBASIC2.38□□□□□ -2.03
Ccbe1Q3MI99 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.38□□□□□ -2.03
Ccbe1Q3MI99 AC027184.1-201ENSMUST00000226991 424 ntBASIC2.38□□□□□ -2.03
Ccbe1Q3MI99 Mir300-201ENSMUST00000083485 79 ntBASIC2.38□□□□□ -2.03
Ccbe1Q3MI99 Gm26175-201ENSMUST00000083794 131 ntBASIC2.38□□□□□ -2.03
Ccbe1Q3MI99 Gm42718-201ENSMUST00000197319 2681 ntBASIC2.38□□□□□ -2.03
Ccbe1Q3MI99 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Ccbe1Q3MI99 Gm25091-201ENSMUST00000103997 71 ntBASIC2.37□□□□□ -2.03
Ccbe1Q3MI99 Gm23469-201ENSMUST00000157131 104 ntBASIC2.37□□□□□ -2.03
Ccbe1Q3MI99 Gm25059-201ENSMUST00000157367 117 ntBASIC2.37□□□□□ -2.03
Ccbe1Q3MI99 Snord11-201ENSMUST00000158468 84 ntBASIC2.37□□□□□ -2.03
Ccbe1Q3MI99 Gm24277-201ENSMUST00000158661 104 ntBASIC2.37□□□□□ -2.03
Ccbe1Q3MI99 Gm25491-201ENSMUST00000158733 308 ntBASIC2.37□□□□□ -2.03
Ccbe1Q3MI99 Mir3103-201ENSMUST00000175474 67 ntBASIC2.37□□□□□ -2.03
Ccbe1Q3MI99 Gm27722-201ENSMUST00000183908 76 ntBASIC2.37□□□□□ -2.03
Ccbe1Q3MI99 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Ccbe1Q3MI99 Gm3724-201ENSMUST00000197957 349 ntBASIC2.37□□□□□ -2.03
Ccbe1Q3MI99 Gm44024-201ENSMUST00000203008 476 ntBASIC2.37□□□□□ -2.03
Ccbe1Q3MI99 Gm18346-201ENSMUST00000216782 325 ntBASIC2.37□□□□□ -2.03
Ccbe1Q3MI99 Mir301-201ENSMUST00000083655 86 ntBASIC2.37□□□□□ -2.03
Ccbe1Q3MI99 Gm22354-201ENSMUST00000083919 70 ntBASIC2.37□□□□□ -2.03
Ccbe1Q3MI99 BC022960-201ENSMUST00000119987 1815 ntBASIC2.37□□□□□ -2.03
Ccbe1Q3MI99 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Ccbe1Q3MI99 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
Ccbe1Q3MI99 Gm22196-201ENSMUST00000116865 109 ntBASIC2.36□□□□□ -2.03
Ccbe1Q3MI99 Gm14567-201ENSMUST00000117155 174 ntBASIC2.36□□□□□ -2.03
Ccbe1Q3MI99 Gm25323-201ENSMUST00000122555 103 ntBASIC2.36□□□□□ -2.03
Ccbe1Q3MI99 Gm24837-201ENSMUST00000158683 81 ntBASIC2.36□□□□□ -2.03
Ccbe1Q3MI99 Gm26297-201ENSMUST00000179464 132 ntBASIC2.36□□□□□ -2.03
Ccbe1Q3MI99 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC2.36□□□□□ -2.03
Ccbe1Q3MI99 Mir6350-201ENSMUST00000183639 105 ntBASIC2.36□□□□□ -2.03
Ccbe1Q3MI99 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.36□□□□□ -2.03
Ccbe1Q3MI99 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.36□□□□□ -2.03
Ccbe1Q3MI99 Gm24787-201ENSMUST00000157380 123 ntBASIC2.35□□□□□ -2.03
Ccbe1Q3MI99 Gm23859-201ENSMUST00000158383 64 ntBASIC2.35□□□□□ -2.03
Ccbe1Q3MI99 Gm22947-201ENSMUST00000158559 91 ntBASIC2.35□□□□□ -2.03
Ccbe1Q3MI99 Mir3092-201ENSMUST00000174954 96 ntBASIC2.35□□□□□ -2.03
Ccbe1Q3MI99 Mir3470b-201ENSMUST00000175563 126 ntBASIC2.35□□□□□ -2.03
Ccbe1Q3MI99 Gm23567-201ENSMUST00000178005 107 ntBASIC2.35□□□□□ -2.03
Ccbe1Q3MI99 AC125167.1-201ENSMUST00000198698 141 ntBASIC2.35□□□□□ -2.03
Ccbe1Q3MI99 Gm44964-201ENSMUST00000207011 273 ntBASIC2.35□□□□□ -2.03
Ccbe1Q3MI99 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.35□□□□□ -2.03
Ccbe1Q3MI99 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.35□□□□□ -2.03
Ccbe1Q3MI99 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.35□□□□□ -2.03
Ccbe1Q3MI99 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Ccbe1Q3MI99 Gm22939-201ENSMUST00000103958 131 ntBASIC2.34□□□□□ -2.03
Ccbe1Q3MI99 Gm24468-201ENSMUST00000104489 104 ntBASIC2.34□□□□□ -2.03
Ccbe1Q3MI99 Gm22494-201ENSMUST00000104495 128 ntBASIC2.34□□□□□ -2.03
Ccbe1Q3MI99 Gm23600-201ENSMUST00000157260 71 ntBASIC2.34□□□□□ -2.03
Ccbe1Q3MI99 Gm24691-201ENSMUST00000157762 140 ntBASIC2.34□□□□□ -2.03
Ccbe1Q3MI99 Gm22187-201ENSMUST00000157819 129 ntBASIC2.34□□□□□ -2.03
Ccbe1Q3MI99 Gm22540-201ENSMUST00000158168 117 ntBASIC2.34□□□□□ -2.03
Ccbe1Q3MI99 Gm25012-201ENSMUST00000158396 164 ntBASIC2.34□□□□□ -2.03
Ccbe1Q3MI99 Mir1927-201ENSMUST00000158579 109 ntBASIC2.34□□□□□ -2.03
Ccbe1Q3MI99 Gm22800-201ENSMUST00000175627 94 ntBASIC2.34□□□□□ -2.03
Ccbe1Q3MI99 Gm27511-201ENSMUST00000183502 127 ntBASIC2.34□□□□□ -2.03
Ccbe1Q3MI99 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC2.34□□□□□ -2.03
Ccbe1Q3MI99 Gm27786-201ENSMUST00000184337 70 ntBASIC2.34□□□□□ -2.03
Ccbe1Q3MI99 Gm44921-201ENSMUST00000205290 301 ntBASIC2.34□□□□□ -2.03
Ccbe1Q3MI99 Gm45429-201ENSMUST00000209527 172 ntBASIC2.34□□□□□ -2.03
Ccbe1Q3MI99 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.34□□□□□ -2.03
Ccbe1Q3MI99 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.34□□□□□ -2.03
Ccbe1Q3MI99 Gm25588-201ENSMUST00000082501 140 ntBASIC2.34□□□□□ -2.03
Ccbe1Q3MI99 Gm25796-201ENSMUST00000082645 163 ntBASIC2.34□□□□□ -2.03
Ccbe1Q3MI99 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Ccbe1Q3MI99 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
Ccbe1Q3MI99 Mir547-201ENSMUST00000102051 78 ntBASIC2.33□□□□□ -2.04
Ccbe1Q3MI99 Gm15069-201ENSMUST00000117792 192 ntBASIC2.33□□□□□ -2.04
Ccbe1Q3MI99 Gm15068-201ENSMUST00000119796 192 ntBASIC2.33□□□□□ -2.04
Ccbe1Q3MI99 Gm23788-201ENSMUST00000122535 106 ntBASIC2.33□□□□□ -2.04
Ccbe1Q3MI99 Gm22079-201ENSMUST00000157592 106 ntBASIC2.33□□□□□ -2.04
Ccbe1Q3MI99 Gm24958-201ENSMUST00000158009 97 ntBASIC2.33□□□□□ -2.04
Ccbe1Q3MI99 Gm25658-201ENSMUST00000158472 128 ntBASIC2.33□□□□□ -2.04
Ccbe1Q3MI99 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC2.33□□□□□ -2.04
Ccbe1Q3MI99 Mir7232-201ENSMUST00000197929 74 ntBASIC2.33□□□□□ -2.04
Ccbe1Q3MI99 AC127371.3-201ENSMUST00000228129 415 ntBASIC2.33□□□□□ -2.04
Ccbe1Q3MI99 Gm23507-201ENSMUST00000083078 107 ntBASIC2.33□□□□□ -2.04
Ccbe1Q3MI99 Snord7-201ENSMUST00000083781 97 ntBASIC2.33□□□□□ -2.04
Ccbe1Q3MI99 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.33□□□□□ -2.04
Ccbe1Q3MI99 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
Ccbe1Q3MI99 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
Ccbe1Q3MI99 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Ccbe1Q3MI99 Mir3096-201ENSMUST00000116685 71 ntBASIC2.32□□□□□ -2.04
Ccbe1Q3MI99 Gm23654-201ENSMUST00000116758 126 ntBASIC2.32□□□□□ -2.04
Ccbe1Q3MI99 Gm26411-201ENSMUST00000157668 107 ntBASIC2.32□□□□□ -2.04
Ccbe1Q3MI99 Gm25633-201ENSMUST00000178565 107 ntBASIC2.32□□□□□ -2.04
Ccbe1Q3MI99 Gm28270-201ENSMUST00000188550 109 ntBASIC2.32□□□□□ -2.04
Ccbe1Q3MI99 Gm28328-201ENSMUST00000188869 109 ntBASIC2.32□□□□□ -2.04
Ccbe1Q3MI99 Mir3069-201ENSMUST00000198802 65 ntBASIC2.32□□□□□ -2.04
Ccbe1Q3MI99 Mir1291-201ENSMUST00000199842 117 ntBASIC2.32□□□□□ -2.04
Ccbe1Q3MI99 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.32□□□□□ -2.04
Ccbe1Q3MI99 Gm30534-201ENSMUST00000217928 207 ntBASIC2.32□□□□□ -2.04
Ccbe1Q3MI99 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC2.32□□□□□ -2.04
Ccbe1Q3MI99 Gm22805-201ENSMUST00000082739 107 ntBASIC2.32□□□□□ -2.04
Ccbe1Q3MI99 Gm24099-201ENSMUST00000083384 107 ntBASIC2.32□□□□□ -2.04
Ccbe1Q3MI99 Snora34-201ENSMUST00000083402 138 ntBASIC2.32□□□□□ -2.04
Ccbe1Q3MI99 Gm23040-201ENSMUST00000083869 163 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms