Protein–RNA interactions for Protein: Q1W617

Shroom4, Protein Shroom4, mousemouse

Predictions only

Length 1,475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom4Q1W617 Mir6338-201ENSMUST00000183389 109 ntBASIC2.62□□□□□ -1.99
Shroom4Q1W617 Gm27921-201ENSMUST00000183968 108 ntBASIC2.62□□□□□ -1.99
Shroom4Q1W617 Gm37281-201ENSMUST00000192412 439 ntBASIC2.62□□□□□ -1.99
Shroom4Q1W617 Gm37361-201ENSMUST00000194345 132 ntBASIC2.62□□□□□ -1.99
Shroom4Q1W617 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.62□□□□□ -1.99
Shroom4Q1W617 Gm26126-201ENSMUST00000083188 164 ntBASIC2.62□□□□□ -1.99
Shroom4Q1W617 Snord104-201ENSMUST00000083192 70 ntBASIC2.62□□□□□ -1.99
Shroom4Q1W617 Gm25681-201ENSMUST00000083938 106 ntBASIC2.62□□□□□ -1.99
Shroom4Q1W617 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.62□□□□□ -1.99
Shroom4Q1W617 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.62□□□□□ -1.99
Shroom4Q1W617 Gm44240-201ENSMUST00000204015 2654 ntBASIC2.62□□□□□ -1.99
Shroom4Q1W617 Gm13343-201ENSMUST00000116474 105 ntBASIC2.61□□□□□ -1.99
Shroom4Q1W617 Gm12449-201ENSMUST00000117572 234 ntBASIC2.61□□□□□ -1.99
Shroom4Q1W617 Gm24894-201ENSMUST00000122744 118 ntBASIC2.61□□□□□ -1.99
Shroom4Q1W617 Gm26482-201ENSMUST00000158015 62 ntBASIC2.61□□□□□ -1.99
Shroom4Q1W617 Snord50a-201ENSMUST00000178154 72 ntBASIC2.61□□□□□ -1.99
Shroom4Q1W617 Gm24463-201ENSMUST00000178417 72 ntBASIC2.61□□□□□ -1.99
Shroom4Q1W617 Gm45116-201ENSMUST00000207392 275 ntBASIC2.61□□□□□ -1.99
Shroom4Q1W617 Gm22055-201ENSMUST00000083388 107 ntBASIC2.61□□□□□ -1.99
Shroom4Q1W617 Gm13231-201ENSMUST00000119218 2850 ntBASIC2.61□□□□□ -1.99
Shroom4Q1W617 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.6□□□□□ -1.99
Shroom4Q1W617 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Shroom4Q1W617 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC2.6□□□□□ -1.99
Shroom4Q1W617 Gm15115-201ENSMUST00000121145 264 ntBASIC2.6□□□□□ -1.99
Shroom4Q1W617 Gm25107-201ENSMUST00000122472 129 ntBASIC2.6□□□□□ -1.99
Shroom4Q1W617 Gm25543-201ENSMUST00000122678 312 ntBASIC2.6□□□□□ -1.99
Shroom4Q1W617 Gm12238-201ENSMUST00000127764 124 ntBASIC2.6□□□□□ -1.99
Shroom4Q1W617 Gm22075-201ENSMUST00000158599 192 ntBASIC2.6□□□□□ -1.99
Shroom4Q1W617 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.6□□□□□ -1.99
Shroom4Q1W617 Mir6962-201ENSMUST00000199512 63 ntBASIC2.6□□□□□ -1.99
Shroom4Q1W617 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.6□□□□□ -1.99
Shroom4Q1W617 Gm24624-201ENSMUST00000082617 164 ntBASIC2.6□□□□□ -1.99
Shroom4Q1W617 Gm24453-201ENSMUST00000083346 76 ntBASIC2.6□□□□□ -1.99
Shroom4Q1W617 Mir369-201ENSMUST00000083627 79 ntBASIC2.6□□□□□ -1.99
Shroom4Q1W617 Gm25006-201ENSMUST00000083813 107 ntBASIC2.6□□□□□ -1.99
Shroom4Q1W617 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Shroom4Q1W617 Gm43960-201ENSMUST00000204249 5020 ntBASIC2.6□□□□□ -1.99
Shroom4Q1W617 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Shroom4Q1W617 Gm22957-201ENSMUST00000122511 123 ntBASIC2.59□□□□□ -1.99
Shroom4Q1W617 Gm24552-201ENSMUST00000158646 103 ntBASIC2.59□□□□□ -1.99
Shroom4Q1W617 Gm24154-201ENSMUST00000175261 130 ntBASIC2.59□□□□□ -1.99
Shroom4Q1W617 Gm45543-201ENSMUST00000209327 88 ntBASIC2.59□□□□□ -1.99
Shroom4Q1W617 CT571266.1-201ENSMUST00000222859 153 ntBASIC2.59□□□□□ -1.99
Shroom4Q1W617 Gm22507-201ENSMUST00000082773 160 ntBASIC2.59□□□□□ -1.99
Shroom4Q1W617 Gm22827-201ENSMUST00000083766 107 ntBASIC2.59□□□□□ -1.99
Shroom4Q1W617 AC153964.2-201ENSMUST00000217704 2474 ntBASIC2.59□□□□□ -1.99
Shroom4Q1W617 Mir767-201ENSMUST00000103256 107 ntBASIC2.58□□□□□ -2
Shroom4Q1W617 Gm24984-201ENSMUST00000104454 133 ntBASIC2.58□□□□□ -2
Shroom4Q1W617 Gm22105-201ENSMUST00000116734 116 ntBASIC2.58□□□□□ -2
Shroom4Q1W617 Gm17113-201ENSMUST00000170118 171 ntBASIC2.58□□□□□ -2
Shroom4Q1W617 Gm29613-201ENSMUST00000185846 313 ntBASIC2.58□□□□□ -2
Shroom4Q1W617 Gm29544-201ENSMUST00000188860 313 ntBASIC2.58□□□□□ -2
Shroom4Q1W617 Gm28808-201ENSMUST00000190978 313 ntBASIC2.58□□□□□ -2
Shroom4Q1W617 Gm24445-201ENSMUST00000083981 107 ntBASIC2.58□□□□□ -2
Shroom4Q1W617 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.58□□□□□ -2
Shroom4Q1W617 Gm14923-201ENSMUST00000118270 155 ntBASIC2.58□□□□□ -2
Shroom4Q1W617 Gm25623-201ENSMUST00000157216 108 ntBASIC2.58□□□□□ -2
Shroom4Q1W617 Gm25267-201ENSMUST00000158522 63 ntBASIC2.58□□□□□ -2
Shroom4Q1W617 Gm23453-201ENSMUST00000083326 106 ntBASIC2.58□□□□□ -2
Shroom4Q1W617 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Shroom4Q1W617 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Shroom4Q1W617 Snord64-201ENSMUST00000104003 67 ntBASIC2.57□□□□□ -2
Shroom4Q1W617 Gm23013-201ENSMUST00000104146 106 ntBASIC2.57□□□□□ -2
Shroom4Q1W617 Gm14215-201ENSMUST00000120578 221 ntBASIC2.57□□□□□ -2
Shroom4Q1W617 Gm24634-201ENSMUST00000158672 107 ntBASIC2.57□□□□□ -2
Shroom4Q1W617 Gm20438-201ENSMUST00000174441 329 ntBASIC2.57□□□□□ -2
Shroom4Q1W617 Gm27656-201ENSMUST00000185055 80 ntBASIC2.57□□□□□ -2
Shroom4Q1W617 Gm43898-201ENSMUST00000204456 424 ntBASIC2.57□□□□□ -2
Shroom4Q1W617 AC126672.1-201ENSMUST00000217096 396 ntBASIC2.57□□□□□ -2
Shroom4Q1W617 Gm25797-201ENSMUST00000082640 107 ntBASIC2.57□□□□□ -2
Shroom4Q1W617 Snord14d-201ENSMUST00000083424 86 ntBASIC2.57□□□□□ -2
Shroom4Q1W617 Gm24163-201ENSMUST00000093660 132 ntBASIC2.57□□□□□ -2
Shroom4Q1W617 Gm6952-201ENSMUST00000118629 159 ntBASIC2.56□□□□□ -2
Shroom4Q1W617 Gm25060-201ENSMUST00000157374 130 ntBASIC2.56□□□□□ -2
Shroom4Q1W617 Gm23586-201ENSMUST00000157657 123 ntBASIC2.56□□□□□ -2
Shroom4Q1W617 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC2.56□□□□□ -2
Shroom4Q1W617 Gm44352-201ENSMUST00000196358 110 ntBASIC2.56□□□□□ -2
Shroom4Q1W617 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC2.56□□□□□ -2
Shroom4Q1W617 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Shroom4Q1W617 Gm22658-201ENSMUST00000104196 155 ntBASIC2.55□□□□□ -2
Shroom4Q1W617 Gm25269-201ENSMUST00000122601 104 ntBASIC2.55□□□□□ -2
Shroom4Q1W617 Gm22540-201ENSMUST00000158168 117 ntBASIC2.55□□□□□ -2
Shroom4Q1W617 Gm25958-201ENSMUST00000175114 71 ntBASIC2.55□□□□□ -2
Shroom4Q1W617 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Shroom4Q1W617 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC2.55□□□□□ -2
Shroom4Q1W617 AC139186.1-201ENSMUST00000197610 94 ntBASIC2.55□□□□□ -2
Shroom4Q1W617 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.55□□□□□ -2
Shroom4Q1W617 AC126939.3-201ENSMUST00000226061 166 ntBASIC2.55□□□□□ -2
Shroom4Q1W617 Gm22708-201ENSMUST00000158987 103 ntBASIC2.54□□□□□ -2
Shroom4Q1W617 Gm17067-202ENSMUST00000180131 123 ntBASIC2.54□□□□□ -2
Shroom4Q1W617 Gm43381-201ENSMUST00000198553 165 ntBASIC2.54□□□□□ -2
Shroom4Q1W617 Gm22247-201ENSMUST00000082476 131 ntBASIC2.54□□□□□ -2
Shroom4Q1W617 Gm26011-201ENSMUST00000104410 104 ntBASIC2.53□□□□□ -2
Shroom4Q1W617 Snord89-201ENSMUST00000104516 110 ntBASIC2.53□□□□□ -2
Shroom4Q1W617 Gm26473-201ENSMUST00000116763 127 ntBASIC2.53□□□□□ -2
Shroom4Q1W617 Gm23336-201ENSMUST00000117023 123 ntBASIC2.53□□□□□ -2
Shroom4Q1W617 Mir6950-201ENSMUST00000184438 73 ntBASIC2.53□□□□□ -2
Shroom4Q1W617 AC165106.2-201ENSMUST00000226749 97 ntBASIC2.53□□□□□ -2
Shroom4Q1W617 Gm22620-201ENSMUST00000082700 133 ntBASIC2.53□□□□□ -2
Shroom4Q1W617 Gm22421-201ENSMUST00000083058 107 ntBASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms