Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
Col8a1Q00780 Gm22454-201ENSMUST00000082583 107 ntBASIC2.35□□□□□ -2.03
Col8a1Q00780 Gm22306-201ENSMUST00000082692 107 ntBASIC2.35□□□□□ -2.03
Col8a1Q00780 Gm22622-201ENSMUST00000082870 129 ntBASIC2.35□□□□□ -2.03
Col8a1Q00780 Mir127-201ENSMUST00000093568 70 ntBASIC2.35□□□□□ -2.03
Col8a1Q00780 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Col8a1Q00780 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.35□□□□□ -2.03
Col8a1Q00780 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
Col8a1Q00780 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Col8a1Q00780 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
Col8a1Q00780 Mir499-201ENSMUST00000102357 79 ntBASIC2.34□□□□□ -2.03
Col8a1Q00780 Gm14709-201ENSMUST00000121225 304 ntBASIC2.34□□□□□ -2.03
Col8a1Q00780 Gm24598-201ENSMUST00000122510 74 ntBASIC2.34□□□□□ -2.03
Col8a1Q00780 Gm26277-201ENSMUST00000157097 152 ntBASIC2.34□□□□□ -2.03
Col8a1Q00780 Gm23048-201ENSMUST00000157237 129 ntBASIC2.34□□□□□ -2.03
Col8a1Q00780 Gm24210-201ENSMUST00000158263 133 ntBASIC2.34□□□□□ -2.03
Col8a1Q00780 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC2.34□□□□□ -2.03
Col8a1Q00780 Gm24572-201ENSMUST00000175505 88 ntBASIC2.34□□□□□ -2.03
Col8a1Q00780 Mir7013-201ENSMUST00000183540 72 ntBASIC2.34□□□□□ -2.03
Col8a1Q00780 Gm44464-201ENSMUST00000198010 138 ntBASIC2.34□□□□□ -2.03
Col8a1Q00780 Gm25820-201ENSMUST00000198589 127 ntBASIC2.34□□□□□ -2.03
Col8a1Q00780 Gm23246-201ENSMUST00000083371 67 ntBASIC2.34□□□□□ -2.03
Col8a1Q00780 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.04
Col8a1Q00780 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.33□□□□□ -2.04
Col8a1Q00780 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
Col8a1Q00780 Mir682-201ENSMUST00000102281 96 ntBASIC2.33□□□□□ -2.04
Col8a1Q00780 Gm26076-201ENSMUST00000104065 105 ntBASIC2.33□□□□□ -2.04
Col8a1Q00780 Gm24171-201ENSMUST00000104126 131 ntBASIC2.33□□□□□ -2.04
Col8a1Q00780 Gm24670-201ENSMUST00000104154 132 ntBASIC2.33□□□□□ -2.04
Col8a1Q00780 DQ267100-201ENSMUST00000122600 72 ntBASIC2.33□□□□□ -2.04
Col8a1Q00780 Gm27399-201ENSMUST00000184250 78 ntBASIC2.33□□□□□ -2.04
Col8a1Q00780 Gm44482-201ENSMUST00000199232 103 ntBASIC2.33□□□□□ -2.04
Col8a1Q00780 AC129085.1-201ENSMUST00000225263 165 ntBASIC2.33□□□□□ -2.04
Col8a1Q00780 Gm24099-201ENSMUST00000083384 107 ntBASIC2.33□□□□□ -2.04
Col8a1Q00780 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
Col8a1Q00780 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Col8a1Q00780 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.32□□□□□ -2.04
Col8a1Q00780 Gm25113-201ENSMUST00000157185 143 ntBASIC2.32□□□□□ -2.04
Col8a1Q00780 Gm24911-201ENSMUST00000157292 136 ntBASIC2.32□□□□□ -2.04
Col8a1Q00780 Gm23381-201ENSMUST00000157676 94 ntBASIC2.32□□□□□ -2.04
Col8a1Q00780 Mir5123-201ENSMUST00000177794 83 ntBASIC2.32□□□□□ -2.04
Col8a1Q00780 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.32□□□□□ -2.04
Col8a1Q00780 Gm23507-201ENSMUST00000083078 107 ntBASIC2.32□□□□□ -2.04
Col8a1Q00780 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Col8a1Q00780 Gm38083-201ENSMUST00000194758 3498 ntBASIC2.32□□□□□ -2.04
Col8a1Q00780 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Col8a1Q00780 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.31□□□□□ -2.04
Col8a1Q00780 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Col8a1Q00780 Gm13862-201ENSMUST00000121220 197 ntBASIC2.31□□□□□ -2.04
Col8a1Q00780 Gm22796-201ENSMUST00000157234 106 ntBASIC2.31□□□□□ -2.04
Col8a1Q00780 Gm22515-201ENSMUST00000158273 305 ntBASIC2.31□□□□□ -2.04
Col8a1Q00780 Gm23113-201ENSMUST00000158477 99 ntBASIC2.31□□□□□ -2.04
Col8a1Q00780 Mir8103-201ENSMUST00000183945 107 ntBASIC2.31□□□□□ -2.04
Col8a1Q00780 Gm27698-201ENSMUST00000184060 249 ntBASIC2.31□□□□□ -2.04
Col8a1Q00780 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC2.31□□□□□ -2.04
Col8a1Q00780 AC136457.1-201ENSMUST00000224195 156 ntBASIC2.31□□□□□ -2.04
Col8a1Q00780 AC126939.1-201ENSMUST00000224943 226 ntBASIC2.31□□□□□ -2.04
Col8a1Q00780 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC2.31□□□□□ -2.04
Col8a1Q00780 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.31□□□□□ -2.04
Col8a1Q00780 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Col8a1Q00780 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
Col8a1Q00780 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Col8a1Q00780 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Col8a1Q00780 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Col8a1Q00780 Gm15281-201ENSMUST00000125181 351 ntBASIC2.3□□□□□ -2.04
Col8a1Q00780 Gm24913-201ENSMUST00000157286 107 ntBASIC2.3□□□□□ -2.04
Col8a1Q00780 Gm25771-201ENSMUST00000158565 144 ntBASIC2.3□□□□□ -2.04
Col8a1Q00780 Mir7242-201ENSMUST00000183710 79 ntBASIC2.3□□□□□ -2.04
Col8a1Q00780 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Col8a1Q00780 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Col8a1Q00780 Gm26420-201ENSMUST00000104273 103 ntBASIC2.29□□□□□ -2.04
Col8a1Q00780 Gm13433-201ENSMUST00000121701 240 ntBASIC2.29□□□□□ -2.04
Col8a1Q00780 Gm23788-201ENSMUST00000122535 106 ntBASIC2.29□□□□□ -2.04
Col8a1Q00780 Gm23889-201ENSMUST00000122689 104 ntBASIC2.29□□□□□ -2.04
Col8a1Q00780 Gm22163-201ENSMUST00000158408 135 ntBASIC2.29□□□□□ -2.04
Col8a1Q00780 Gm24082-201ENSMUST00000175175 83 ntBASIC2.29□□□□□ -2.04
Col8a1Q00780 Gm22638-201ENSMUST00000179674 107 ntBASIC2.29□□□□□ -2.04
Col8a1Q00780 Gm27369-201ENSMUST00000185182 71 ntBASIC2.29□□□□□ -2.04
Col8a1Q00780 Gm42684-201ENSMUST00000197663 3615 ntBASIC2.29□□□□□ -2.04
Col8a1Q00780 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Col8a1Q00780 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.28□□□□□ -2.04
Col8a1Q00780 Gm7209-201ENSMUST00000122339 333 ntBASIC2.28□□□□□ -2.04
Col8a1Q00780 Gm26415-201ENSMUST00000157673 292 ntBASIC2.28□□□□□ -2.04
Col8a1Q00780 Gm25769-201ENSMUST00000158569 127 ntBASIC2.28□□□□□ -2.04
Col8a1Q00780 Gm16111-201ENSMUST00000162128 285 ntBASIC2.28□□□□□ -2.04
Col8a1Q00780 Gm25633-201ENSMUST00000178565 107 ntBASIC2.28□□□□□ -2.04
Col8a1Q00780 Gm44476-201ENSMUST00000196225 91 ntBASIC2.28□□□□□ -2.04
Col8a1Q00780 Gm44477-201ENSMUST00000199661 110 ntBASIC2.28□□□□□ -2.04
Col8a1Q00780 AC124687.1-201ENSMUST00000221868 189 ntBASIC2.28□□□□□ -2.04
Col8a1Q00780 AC098718.1-201ENSMUST00000226166 175 ntBASIC2.28□□□□□ -2.04
Col8a1Q00780 mt-Ts2-201ENSMUST00000082416 59 ntBASIC2.28□□□□□ -2.04
Col8a1Q00780 Gm22805-201ENSMUST00000082739 107 ntBASIC2.28□□□□□ -2.04
Col8a1Q00780 Gm25124-201ENSMUST00000083345 164 ntBASIC2.28□□□□□ -2.04
Col8a1Q00780 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Col8a1Q00780 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
Col8a1Q00780 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Col8a1Q00780 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Col8a1Q00780 Mir466l-201ENSMUST00000104866 121 ntBASIC2.27□□□□□ -2.05
Col8a1Q00780 Gm23670-201ENSMUST00000157469 119 ntBASIC2.27□□□□□ -2.05
Col8a1Q00780 Gm24291-201ENSMUST00000157633 162 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 98.5 ms