Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC2.81□□□□□ -1.96
Rfx1P48377 Gm25060-201ENSMUST00000157374 130 ntBASIC2.81□□□□□ -1.96
Rfx1P48377 Gm24010-201ENSMUST00000157731 282 ntBASIC2.81□□□□□ -1.96
Rfx1P48377 Mir7232-201ENSMUST00000197929 74 ntBASIC2.81□□□□□ -1.96
Rfx1P48377 Gm44526-201ENSMUST00000204664 121 ntBASIC2.81□□□□□ -1.96
Rfx1P48377 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC2.81□□□□□ -1.96
Rfx1P48377 AC164612.2-202ENSMUST00000216314 253 ntBASIC2.81□□□□□ -1.96
Rfx1P48377 Gm25628-201ENSMUST00000084002 105 ntBASIC2.81□□□□□ -1.96
Rfx1P48377 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Rfx1P48377 Gm14709-201ENSMUST00000121225 304 ntBASIC2.8□□□□□ -1.96
Rfx1P48377 Gm25910-201ENSMUST00000157620 140 ntBASIC2.8□□□□□ -1.96
Rfx1P48377 Mir107-201ENSMUST00000083660 87 ntBASIC2.8□□□□□ -1.96
Rfx1P48377 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.79□□□□□ -1.96
Rfx1P48377 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Rfx1P48377 Gm26247-201ENSMUST00000116702 91 ntBASIC2.79□□□□□ -1.96
Rfx1P48377 Gm13588-201ENSMUST00000120026 135 ntBASIC2.79□□□□□ -1.96
Rfx1P48377 Gm25945-201ENSMUST00000122484 135 ntBASIC2.79□□□□□ -1.96
Rfx1P48377 Mir1949-201ENSMUST00000157434 141 ntBASIC2.79□□□□□ -1.96
Rfx1P48377 Gm25994-201ENSMUST00000175392 101 ntBASIC2.79□□□□□ -1.96
Rfx1P48377 Trbv7-201ENSMUST00000193339 402 ntBASIC2.79□□□□□ -1.96
Rfx1P48377 Mir3069-201ENSMUST00000198802 65 ntBASIC2.79□□□□□ -1.96
Rfx1P48377 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.79□□□□□ -1.96
Rfx1P48377 Gm24661-201ENSMUST00000083205 104 ntBASIC2.79□□□□□ -1.96
Rfx1P48377 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
Rfx1P48377 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
Rfx1P48377 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Rfx1P48377 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2.78□□□□□ -1.96
Rfx1P48377 n-R5s188-201ENSMUST00000122646 105 ntBASIC2.78□□□□□ -1.96
Rfx1P48377 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC2.78□□□□□ -1.96
Rfx1P48377 Gm23859-201ENSMUST00000158383 64 ntBASIC2.78□□□□□ -1.96
Rfx1P48377 Gm25771-201ENSMUST00000158565 144 ntBASIC2.78□□□□□ -1.96
Rfx1P48377 Gm25769-201ENSMUST00000158569 127 ntBASIC2.78□□□□□ -1.96
Rfx1P48377 Gm22888-201ENSMUST00000158640 77 ntBASIC2.78□□□□□ -1.96
Rfx1P48377 Gm26004-201ENSMUST00000158804 116 ntBASIC2.78□□□□□ -1.96
Rfx1P48377 Trav5d-3-201ENSMUST00000170041 270 ntBASIC2.78□□□□□ -1.96
Rfx1P48377 Mir7683-201ENSMUST00000183842 61 ntBASIC2.78□□□□□ -1.96
Rfx1P48377 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.78□□□□□ -1.96
Rfx1P48377 Gm22283-201ENSMUST00000082556 161 ntBASIC2.78□□□□□ -1.96
Rfx1P48377 Gm22752-201ENSMUST00000102083 109 ntBASIC2.77□□□□□ -1.97
Rfx1P48377 Gm22545-201ENSMUST00000104350 132 ntBASIC2.77□□□□□ -1.97
Rfx1P48377 Gm23181-201ENSMUST00000158685 110 ntBASIC2.77□□□□□ -1.97
Rfx1P48377 Gm24345-201ENSMUST00000158706 124 ntBASIC2.77□□□□□ -1.97
Rfx1P48377 Gm25707-201ENSMUST00000175120 96 ntBASIC2.77□□□□□ -1.97
Rfx1P48377 Gm23963-201ENSMUST00000179603 77 ntBASIC2.77□□□□□ -1.97
Rfx1P48377 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.77□□□□□ -1.97
Rfx1P48377 Mir19b-2-201ENSMUST00000083539 84 ntBASIC2.77□□□□□ -1.97
Rfx1P48377 Gm24698-201ENSMUST00000083883 130 ntBASIC2.77□□□□□ -1.97
Rfx1P48377 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
Rfx1P48377 Gm26011-201ENSMUST00000104410 104 ntBASIC2.76□□□□□ -1.97
Rfx1P48377 Gm25113-201ENSMUST00000157185 143 ntBASIC2.76□□□□□ -1.97
Rfx1P48377 Gm22083-201ENSMUST00000157586 102 ntBASIC2.76□□□□□ -1.97
Rfx1P48377 Gm25368-201ENSMUST00000158847 131 ntBASIC2.76□□□□□ -1.97
Rfx1P48377 Gm22683-201ENSMUST00000082854 137 ntBASIC2.76□□□□□ -1.97
Rfx1P48377 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC2.76□□□□□ -1.97
Rfx1P48377 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Rfx1P48377 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
Rfx1P48377 Gm26420-201ENSMUST00000104273 103 ntBASIC2.75□□□□□ -1.97
Rfx1P48377 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.75□□□□□ -1.97
Rfx1P48377 Gm26084-201ENSMUST00000157903 104 ntBASIC2.75□□□□□ -1.97
Rfx1P48377 Gm24000-201ENSMUST00000158063 89 ntBASIC2.75□□□□□ -1.97
Rfx1P48377 Gm24769-201ENSMUST00000158506 129 ntBASIC2.75□□□□□ -1.97
Rfx1P48377 Gm24771-201ENSMUST00000158508 137 ntBASIC2.75□□□□□ -1.97
Rfx1P48377 Mir669j-201ENSMUST00000179023 121 ntBASIC2.75□□□□□ -1.97
Rfx1P48377 Gm26864-201ENSMUST00000181346 156 ntBASIC2.75□□□□□ -1.97
Rfx1P48377 AC120540.2-201ENSMUST00000221716 387 ntBASIC2.75□□□□□ -1.97
Rfx1P48377 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
Rfx1P48377 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
Rfx1P48377 Mir682-201ENSMUST00000102281 96 ntBASIC2.74□□□□□ -1.97
Rfx1P48377 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC2.74□□□□□ -1.97
Rfx1P48377 Mir7013-201ENSMUST00000183540 72 ntBASIC2.74□□□□□ -1.97
Rfx1P48377 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.74□□□□□ -1.97
Rfx1P48377 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Rfx1P48377 Mir344c-201ENSMUST00000103919 92 ntBASIC2.73□□□□□ -1.97
Rfx1P48377 n-R5s73-201ENSMUST00000122508 107 ntBASIC2.73□□□□□ -1.97
Rfx1P48377 Gm24656-201ENSMUST00000177548 132 ntBASIC2.73□□□□□ -1.97
Rfx1P48377 Gm27792-201ENSMUST00000184031 115 ntBASIC2.73□□□□□ -1.97
Rfx1P48377 Gm37557-201ENSMUST00000191640 139 ntBASIC2.73□□□□□ -1.97
Rfx1P48377 Gm38298-201ENSMUST00000193578 118 ntBASIC2.73□□□□□ -1.97
Rfx1P48377 Gm24412-201ENSMUST00000083426 109 ntBASIC2.73□□□□□ -1.97
Rfx1P48377 Gm22576-201ENSMUST00000083733 104 ntBASIC2.73□□□□□ -1.97
Rfx1P48377 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Rfx1P48377 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Rfx1P48377 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Rfx1P48377 Gm15067-201ENSMUST00000119534 156 ntBASIC2.72□□□□□ -1.97
Rfx1P48377 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC2.72□□□□□ -1.97
Rfx1P48377 mt-Tt-201ENSMUST00000082422 67 ntBASIC2.72□□□□□ -1.97
Rfx1P48377 Gm26326-201ENSMUST00000083070 129 ntBASIC2.72□□□□□ -1.97
Rfx1P48377 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Rfx1P48377 Gm16186-201ENSMUST00000120132 216 ntBASIC2.71□□□□□ -1.98
Rfx1P48377 Gm26091-201ENSMUST00000122704 82 ntBASIC2.71□□□□□ -1.98
Rfx1P48377 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.71□□□□□ -1.98
Rfx1P48377 Mir5118-201ENSMUST00000175551 67 ntBASIC2.71□□□□□ -1.98
Rfx1P48377 Gm26073-201ENSMUST00000179906 127 ntBASIC2.71□□□□□ -1.98
Rfx1P48377 Gm27668-201ENSMUST00000184188 120 ntBASIC2.71□□□□□ -1.98
Rfx1P48377 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC2.71□□□□□ -1.98
Rfx1P48377 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Rfx1P48377 Mir880-201ENSMUST00000104809 78 ntBASIC2.7□□□□□ -1.98
Rfx1P48377 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC2.7□□□□□ -1.98
Rfx1P48377 Mir3471-1-201ENSMUST00000175139 131 ntBASIC2.7□□□□□ -1.98
Rfx1P48377 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms