Protein–RNA interactions for Protein: P28700

Rxra, Retinoic acid receptor RXR-alpha, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxraP28700 Gm43427-201ENSMUST00000198188 331 ntBASIC1.71□□□□□ -2.14
RxraP28700 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
RxraP28700 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.71□□□□□ -2.14
RxraP28700 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.71□□□□□ -2.14
RxraP28700 Gm26922-201ENSMUST00000082687 72 ntBASIC1.71□□□□□ -2.14
RxraP28700 Gm24762-201ENSMUST00000083689 104 ntBASIC1.71□□□□□ -2.14
RxraP28700 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
RxraP28700 Gm22545-201ENSMUST00000104350 132 ntBASIC1.7□□□□□ -2.14
RxraP28700 Gm24132-201ENSMUST00000104745 91 ntBASIC1.7□□□□□ -2.14
RxraP28700 Gm23170-201ENSMUST00000157158 106 ntBASIC1.7□□□□□ -2.14
RxraP28700 Gm27265-201ENSMUST00000183559 77 ntBASIC1.7□□□□□ -2.14
RxraP28700 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.69□□□□□ -2.14
RxraP28700 Gm25538-201ENSMUST00000101943 107 ntBASIC1.69□□□□□ -2.14
RxraP28700 Gm25279-201ENSMUST00000122608 133 ntBASIC1.69□□□□□ -2.14
RxraP28700 Gm25494-201ENSMUST00000158143 100 ntBASIC1.69□□□□□ -2.14
RxraP28700 Gm23760-201ENSMUST00000158350 116 ntBASIC1.69□□□□□ -2.14
RxraP28700 Mir669n-201ENSMUST00000158636 54 ntBASIC1.69□□□□□ -2.14
RxraP28700 Gm28409-201ENSMUST00000187064 103 ntBASIC1.69□□□□□ -2.14
RxraP28700 Gm38183-201ENSMUST00000193189 205 ntBASIC1.69□□□□□ -2.14
RxraP28700 Gm37624-201ENSMUST00000193751 219 ntBASIC1.69□□□□□ -2.14
RxraP28700 Gm37579-201ENSMUST00000194291 142 ntBASIC1.69□□□□□ -2.14
RxraP28700 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.69□□□□□ -2.14
RxraP28700 CT010449.1-201ENSMUST00000220624 153 ntBASIC1.69□□□□□ -2.14
RxraP28700 AC122320.1-201ENSMUST00000227233 105 ntBASIC1.69□□□□□ -2.14
RxraP28700 Gm22306-201ENSMUST00000082692 107 ntBASIC1.69□□□□□ -2.14
RxraP28700 Gm26204-201ENSMUST00000082906 107 ntBASIC1.69□□□□□ -2.14
RxraP28700 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
RxraP28700 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.68□□□□□ -2.14
RxraP28700 Gm22842-201ENSMUST00000157709 118 ntBASIC1.68□□□□□ -2.14
RxraP28700 Gm26004-201ENSMUST00000158804 116 ntBASIC1.68□□□□□ -2.14
RxraP28700 Mir7679-201ENSMUST00000183379 63 ntBASIC1.68□□□□□ -2.14
RxraP28700 Mir7026-201ENSMUST00000184384 67 ntBASIC1.68□□□□□ -2.14
RxraP28700 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.68□□□□□ -2.14
RxraP28700 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.68□□□□□ -2.14
RxraP28700 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.67□□□□□ -2.14
RxraP28700 Mir758-201ENSMUST00000103260 81 ntBASIC1.67□□□□□ -2.14
RxraP28700 Gm24375-201ENSMUST00000104397 132 ntBASIC1.67□□□□□ -2.14
RxraP28700 Gm24262-201ENSMUST00000157431 144 ntBASIC1.67□□□□□ -2.14
RxraP28700 Gm22586-201ENSMUST00000157507 122 ntBASIC1.67□□□□□ -2.14
RxraP28700 Gm22336-201ENSMUST00000157719 107 ntBASIC1.67□□□□□ -2.14
RxraP28700 Gm22337-201ENSMUST00000157721 132 ntBASIC1.67□□□□□ -2.14
RxraP28700 Mir7225-201ENSMUST00000184178 54 ntBASIC1.67□□□□□ -2.14
RxraP28700 Gm18188-201ENSMUST00000219386 478 ntBASIC1.67□□□□□ -2.14
RxraP28700 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.67□□□□□ -2.14
RxraP28700 Snord14a-201ENSMUST00000082807 87 ntBASIC1.67□□□□□ -2.14
RxraP28700 Gm22743-201ENSMUST00000083445 133 ntBASIC1.67□□□□□ -2.14
RxraP28700 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.67□□□□□ -2.14
RxraP28700 n-R5s183-201ENSMUST00000083939 115 ntBASIC1.67□□□□□ -2.14
RxraP28700 Mir490-201ENSMUST00000093567 84 ntBASIC1.67□□□□□ -2.14
RxraP28700 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.67□□□□□ -2.14
RxraP28700 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
RxraP28700 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
RxraP28700 Gm25992-201ENSMUST00000102437 109 ntBASIC1.66□□□□□ -2.14
RxraP28700 Gm23113-201ENSMUST00000158477 99 ntBASIC1.66□□□□□ -2.14
RxraP28700 Gm24229-201ENSMUST00000158830 118 ntBASIC1.66□□□□□ -2.14
RxraP28700 Gm27285-201ENSMUST00000183875 127 ntBASIC1.66□□□□□ -2.14
RxraP28700 Mir6352-201ENSMUST00000184495 116 ntBASIC1.66□□□□□ -2.14
RxraP28700 Mir7241-201ENSMUST00000184532 64 ntBASIC1.66□□□□□ -2.14
RxraP28700 Gm43602-201ENSMUST00000196772 300 ntBASIC1.66□□□□□ -2.14
RxraP28700 Gm36189-201ENSMUST00000204113 523 ntBASIC1.66□□□□□ -2.14
RxraP28700 Mir34a-201ENSMUST00000083559 102 ntBASIC1.66□□□□□ -2.14
RxraP28700 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
RxraP28700 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
RxraP28700 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.66□□□□□ -2.14
RxraP28700 Gm25938-201ENSMUST00000104139 166 ntBASIC1.65□□□□□ -2.15
RxraP28700 Gm22051-201ENSMUST00000117002 127 ntBASIC1.65□□□□□ -2.15
RxraP28700 Gm24015-201ENSMUST00000157725 232 ntBASIC1.65□□□□□ -2.15
RxraP28700 Gm23209-201ENSMUST00000158667 110 ntBASIC1.65□□□□□ -2.15
RxraP28700 Gm22665-201ENSMUST00000158720 275 ntBASIC1.65□□□□□ -2.15
RxraP28700 Mir669k-201ENSMUST00000177742 127 ntBASIC1.65□□□□□ -2.15
RxraP28700 Gm22348-201ENSMUST00000178674 79 ntBASIC1.65□□□□□ -2.15
RxraP28700 Gm25673-201ENSMUST00000179957 127 ntBASIC1.65□□□□□ -2.15
RxraP28700 Gm27928-201ENSMUST00000183747 256 ntBASIC1.65□□□□□ -2.15
RxraP28700 Mir6351-201ENSMUST00000183826 99 ntBASIC1.65□□□□□ -2.15
RxraP28700 Gm25697-201ENSMUST00000082902 98 ntBASIC1.65□□□□□ -2.15
RxraP28700 Mir302d-201ENSMUST00000083513 66 ntBASIC1.65□□□□□ -2.15
RxraP28700 Mir301b-201ENSMUST00000102333 97 ntBASIC1.64□□□□□ -2.15
RxraP28700 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC1.64□□□□□ -2.15
RxraP28700 Gm22228-201ENSMUST00000157364 101 ntBASIC1.64□□□□□ -2.15
RxraP28700 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.64□□□□□ -2.15
RxraP28700 Gm23419-201ENSMUST00000175523 84 ntBASIC1.64□□□□□ -2.15
RxraP28700 Gm28344-201ENSMUST00000185704 279 ntBASIC1.64□□□□□ -2.15
RxraP28700 Mir1a-2-201ENSMUST00000198520 72 ntBASIC1.64□□□□□ -2.15
RxraP28700 Gm44052-201ENSMUST00000203382 396 ntBASIC1.64□□□□□ -2.15
RxraP28700 Gm44057-201ENSMUST00000204547 96 ntBASIC1.64□□□□□ -2.15
RxraP28700 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.64□□□□□ -2.15
RxraP28700 Gm46993-201ENSMUST00000220708 259 ntBASIC1.64□□□□□ -2.15
RxraP28700 Gm25038-201ENSMUST00000082928 130 ntBASIC1.64□□□□□ -2.15
RxraP28700 Gm24406-201ENSMUST00000083026 128 ntBASIC1.64□□□□□ -2.15
RxraP28700 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.63□□□□□ -2.15
RxraP28700 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
RxraP28700 Gm11334-201ENSMUST00000121969 156 ntBASIC1.63□□□□□ -2.15
RxraP28700 Gm25223-201ENSMUST00000158200 110 ntBASIC1.63□□□□□ -2.15
RxraP28700 Mir3061-201ENSMUST00000175129 91 ntBASIC1.63□□□□□ -2.15
RxraP28700 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.63□□□□□ -2.15
RxraP28700 Gm28383-201ENSMUST00000187563 139 ntBASIC1.63□□□□□ -2.15
RxraP28700 Gm37997-201ENSMUST00000193515 267 ntBASIC1.63□□□□□ -2.15
RxraP28700 Gm23377-201ENSMUST00000082943 126 ntBASIC1.63□□□□□ -2.15
RxraP28700 Mir410-201ENSMUST00000083563 81 ntBASIC1.63□□□□□ -2.15
RxraP28700 Gm25895-201ENSMUST00000083714 100 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms