Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Snora41-201ENSMUST00000082668 132 ntBASIC0.96□□□□□ -2.26
Cd40lgP27548 Gm22505-201ENSMUST00000082956 108 ntBASIC0.96□□□□□ -2.26
Cd40lgP27548 Gm22571-201ENSMUST00000082984 70 ntBASIC0.96□□□□□ -2.26
Cd40lgP27548 Gm22363-201ENSMUST00000083100 108 ntBASIC0.96□□□□□ -2.26
Cd40lgP27548 Gm23814-201ENSMUST00000083230 102 ntBASIC0.96□□□□□ -2.26
Cd40lgP27548 Gm22743-201ENSMUST00000083445 133 ntBASIC0.96□□□□□ -2.26
Cd40lgP27548 Gm23095-201ENSMUST00000083446 107 ntBASIC0.96□□□□□ -2.26
Cd40lgP27548 Gm25170-201ENSMUST00000104191 129 ntBASIC0.95□□□□□ -2.26
Cd40lgP27548 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
Cd40lgP27548 Gm23106-201ENSMUST00000157554 101 ntBASIC0.95□□□□□ -2.26
Cd40lgP27548 Gm24942-201ENSMUST00000158328 114 ntBASIC0.95□□□□□ -2.26
Cd40lgP27548 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.95□□□□□ -2.26
Cd40lgP27548 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC0.95□□□□□ -2.26
Cd40lgP27548 Mir6381-201ENSMUST00000183426 87 ntBASIC0.95□□□□□ -2.26
Cd40lgP27548 Gm29140-201ENSMUST00000190187 476 ntBASIC0.95□□□□□ -2.26
Cd40lgP27548 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC0.95□□□□□ -2.26
Cd40lgP27548 AC125374.2-201ENSMUST00000214278 162 ntBASIC0.95□□□□□ -2.26
Cd40lgP27548 Gm25128-201ENSMUST00000083339 76 ntBASIC0.95□□□□□ -2.26
Cd40lgP27548 Mir448-201ENSMUST00000083516 112 ntBASIC0.95□□□□□ -2.26
Cd40lgP27548 Gm24523-201ENSMUST00000083965 132 ntBASIC0.95□□□□□ -2.26
Cd40lgP27548 Gm26074-201ENSMUST00000104063 129 ntBASIC0.94□□□□□ -2.26
Cd40lgP27548 Gm25274-201ENSMUST00000104296 135 ntBASIC0.94□□□□□ -2.26
Cd40lgP27548 Snord71-201ENSMUST00000104361 85 ntBASIC0.94□□□□□ -2.26
Cd40lgP27548 Gm26089-201ENSMUST00000157898 107 ntBASIC0.94□□□□□ -2.26
Cd40lgP27548 Gm23113-201ENSMUST00000158477 99 ntBASIC0.94□□□□□ -2.26
Cd40lgP27548 Gm23581-201ENSMUST00000158531 63 ntBASIC0.94□□□□□ -2.26
Cd40lgP27548 Gm26287-201ENSMUST00000158887 81 ntBASIC0.94□□□□□ -2.26
Cd40lgP27548 Gm25024-201ENSMUST00000179667 104 ntBASIC0.94□□□□□ -2.26
Cd40lgP27548 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.94□□□□□ -2.26
Cd40lgP27548 Gm13711-201ENSMUST00000119708 453 ntBASIC0.93□□□□□ -2.26
Cd40lgP27548 Gm23996-201ENSMUST00000158062 131 ntBASIC0.93□□□□□ -2.26
Cd40lgP27548 Mir1931-201ENSMUST00000158589 119 ntBASIC0.93□□□□□ -2.26
Cd40lgP27548 Gm28344-201ENSMUST00000185704 279 ntBASIC0.93□□□□□ -2.26
Cd40lgP27548 Gm29022-201ENSMUST00000190702 225 ntBASIC0.93□□□□□ -2.26
Cd40lgP27548 Gm38274-201ENSMUST00000195689 148 ntBASIC0.93□□□□□ -2.26
Cd40lgP27548 Gm44977-201ENSMUST00000205283 420 ntBASIC0.93□□□□□ -2.26
Cd40lgP27548 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC0.93□□□□□ -2.26
Cd40lgP27548 Gm23299-201ENSMUST00000082708 79 ntBASIC0.93□□□□□ -2.26
Cd40lgP27548 Gm24460-201ENSMUST00000082731 106 ntBASIC0.93□□□□□ -2.26
Cd40lgP27548 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
Cd40lgP27548 Gm22784-201ENSMUST00000104088 132 ntBASIC0.92□□□□□ -2.26
Cd40lgP27548 Gm24375-201ENSMUST00000104397 132 ntBASIC0.92□□□□□ -2.26
Cd40lgP27548 Gm13801-201ENSMUST00000120750 160 ntBASIC0.92□□□□□ -2.26
Cd40lgP27548 Gm24909-201ENSMUST00000157290 280 ntBASIC0.92□□□□□ -2.26
Cd40lgP27548 Gm25664-201ENSMUST00000157697 107 ntBASIC0.92□□□□□ -2.26
Cd40lgP27548 Gm24392-201ENSMUST00000158136 103 ntBASIC0.92□□□□□ -2.26
Cd40lgP27548 Gm24667-201ENSMUST00000158938 103 ntBASIC0.92□□□□□ -2.26
Cd40lgP27548 Gm23340-201ENSMUST00000158955 123 ntBASIC0.92□□□□□ -2.26
Cd40lgP27548 CT033781.2-201ENSMUST00000221113 153 ntBASIC0.92□□□□□ -2.26
Cd40lgP27548 Gm24423-201ENSMUST00000101982 106 ntBASIC0.91□□□□□ -2.26
Cd40lgP27548 Mir875-201ENSMUST00000104698 78 ntBASIC0.91□□□□□ -2.26
Cd40lgP27548 Gm11322-201ENSMUST00000118095 435 ntBASIC0.91□□□□□ -2.26
Cd40lgP27548 Gm11856-201ENSMUST00000118712 276 ntBASIC0.91□□□□□ -2.26
Cd40lgP27548 Gm24808-201ENSMUST00000157993 118 ntBASIC0.91□□□□□ -2.26
Cd40lgP27548 Gm26402-201ENSMUST00000158499 113 ntBASIC0.91□□□□□ -2.26
Cd40lgP27548 Gm22888-201ENSMUST00000158640 77 ntBASIC0.91□□□□□ -2.26
Cd40lgP27548 Gm24020-201ENSMUST00000180156 108 ntBASIC0.91□□□□□ -2.26
Cd40lgP27548 Gm27905-201ENSMUST00000184005 207 ntBASIC0.91□□□□□ -2.26
Cd40lgP27548 CT010454.1-201ENSMUST00000225975 265 ntBASIC0.91□□□□□ -2.26
Cd40lgP27548 Gm23679-201ENSMUST00000083161 119 ntBASIC0.91□□□□□ -2.26
Cd40lgP27548 Gm12797-201ENSMUST00000118645 273 ntBASIC0.9□□□□□ -2.27
Cd40lgP27548 Gm12837-201ENSMUST00000120131 373 ntBASIC0.9□□□□□ -2.27
Cd40lgP27548 Gm23219-201ENSMUST00000158123 87 ntBASIC0.9□□□□□ -2.27
Cd40lgP27548 Gm25715-201ENSMUST00000158627 125 ntBASIC0.9□□□□□ -2.27
Cd40lgP27548 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.9□□□□□ -2.27
Cd40lgP27548 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
Cd40lgP27548 Gm27545-201ENSMUST00000184755 202 ntBASIC0.9□□□□□ -2.27
Cd40lgP27548 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC0.9□□□□□ -2.27
Cd40lgP27548 AC160550.1-201ENSMUST00000228659 181 ntBASIC0.9□□□□□ -2.27
Cd40lgP27548 Gm26224-201ENSMUST00000082506 80 ntBASIC0.9□□□□□ -2.27
Cd40lgP27548 n-R5s183-201ENSMUST00000083939 115 ntBASIC0.9□□□□□ -2.27
Cd40lgP27548 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
Cd40lgP27548 Gm14792-201ENSMUST00000119725 258 ntBASIC0.89□□□□□ -2.27
Cd40lgP27548 Gm22553-201ENSMUST00000157797 295 ntBASIC0.89□□□□□ -2.27
Cd40lgP27548 Gm25235-201ENSMUST00000179933 107 ntBASIC0.89□□□□□ -2.27
Cd40lgP27548 Mir7663-201ENSMUST00000183950 61 ntBASIC0.89□□□□□ -2.27
Cd40lgP27548 Mir6380-201ENSMUST00000184334 81 ntBASIC0.89□□□□□ -2.27
Cd40lgP27548 Gm27419-201ENSMUST00000184576 109 ntBASIC0.89□□□□□ -2.27
Cd40lgP27548 Gm28862-201ENSMUST00000188246 163 ntBASIC0.89□□□□□ -2.27
Cd40lgP27548 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
Cd40lgP27548 Gm44563-201ENSMUST00000207958 178 ntBASIC0.89□□□□□ -2.27
Cd40lgP27548 Gm22704-201ENSMUST00000083027 137 ntBASIC0.89□□□□□ -2.27
Cd40lgP27548 Mir27b-201ENSMUST00000083541 73 ntBASIC0.89□□□□□ -2.27
Cd40lgP27548 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.89□□□□□ -2.27
Cd40lgP27548 Mir880-201ENSMUST00000104809 78 ntBASIC0.88□□□□□ -2.27
Cd40lgP27548 Gm22802-201ENSMUST00000175621 89 ntBASIC0.88□□□□□ -2.27
Cd40lgP27548 Gm27420-201ENSMUST00000183823 79 ntBASIC0.88□□□□□ -2.27
Cd40lgP27548 Mir7039-201ENSMUST00000183852 85 ntBASIC0.88□□□□□ -2.27
Cd40lgP27548 Gm38183-201ENSMUST00000193189 205 ntBASIC0.88□□□□□ -2.27
Cd40lgP27548 Gm23451-201ENSMUST00000083328 122 ntBASIC0.88□□□□□ -2.27
Cd40lgP27548 Mir22-201ENSMUST00000083595 95 ntBASIC0.88□□□□□ -2.27
Cd40lgP27548 Gm25650-201ENSMUST00000083784 162 ntBASIC0.88□□□□□ -2.27
Cd40lgP27548 Gm25538-201ENSMUST00000101943 107 ntBASIC0.87□□□□□ -2.27
Cd40lgP27548 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.87□□□□□ -2.27
Cd40lgP27548 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.87□□□□□ -2.27
Cd40lgP27548 Gm22233-201ENSMUST00000157464 114 ntBASIC0.87□□□□□ -2.27
Cd40lgP27548 Gm25424-201ENSMUST00000157612 58 ntBASIC0.87□□□□□ -2.27
Cd40lgP27548 Gm23893-201ENSMUST00000158106 134 ntBASIC0.87□□□□□ -2.27
Cd40lgP27548 Gm25868-201ENSMUST00000158253 114 ntBASIC0.87□□□□□ -2.27
Cd40lgP27548 Mir6394-201ENSMUST00000184738 99 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 209.6 ms