Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Msx1P13297 Gm22999-201ENSMUST00000157082 88 ntBASIC3.1□□□□□ -1.91
Msx1P13297 Gm24000-201ENSMUST00000158063 89 ntBASIC3.1□□□□□ -1.91
Msx1P13297 Gm16584-201ENSMUST00000159267 189 ntBASIC3.1□□□□□ -1.91
Msx1P13297 Gm24801-201ENSMUST00000178503 105 ntBASIC3.1□□□□□ -1.91
Msx1P13297 Gm45386-201ENSMUST00000210194 218 ntBASIC3.1□□□□□ -1.91
Msx1P13297 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC3.1□□□□□ -1.91
Msx1P13297 Mir29c-201ENSMUST00000083614 88 ntBASIC3.1□□□□□ -1.91
Msx1P13297 Mir301-201ENSMUST00000083655 86 ntBASIC3.1□□□□□ -1.91
Msx1P13297 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
Msx1P13297 AC158598.2-201ENSMUST00000213397 3832 ntBASIC3.1□□□□□ -1.91
Msx1P13297 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Msx1P13297 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Msx1P13297 AC153966.1-201ENSMUST00000220106 3764 ntBASIC3.09□□□□□ -1.91
Msx1P13297 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Msx1P13297 Mir1187-201ENSMUST00000116936 122 ntBASIC3.09□□□□□ -1.91
Msx1P13297 Mir1950-201ENSMUST00000158526 74 ntBASIC3.09□□□□□ -1.91
Msx1P13297 Mir5127-201ENSMUST00000175295 71 ntBASIC3.09□□□□□ -1.91
Msx1P13297 Gm26073-201ENSMUST00000179906 127 ntBASIC3.09□□□□□ -1.91
Msx1P13297 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC3.09□□□□□ -1.91
Msx1P13297 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.09□□□□□ -1.91
Msx1P13297 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
Msx1P13297 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.09□□□□□ -1.92
Msx1P13297 AC132221.1-201ENSMUST00000220577 3841 ntBASIC3.08□□□□□ -1.92
Msx1P13297 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
Msx1P13297 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Msx1P13297 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC3.08□□□□□ -1.92
Msx1P13297 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
Msx1P13297 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Msx1P13297 Mir1195-201ENSMUST00000116818 98 ntBASIC3.08□□□□□ -1.92
Msx1P13297 Gm13433-201ENSMUST00000121701 240 ntBASIC3.08□□□□□ -1.92
Msx1P13297 Gm23390-201ENSMUST00000157393 106 ntBASIC3.08□□□□□ -1.92
Msx1P13297 Gm26215-201ENSMUST00000158584 139 ntBASIC3.08□□□□□ -1.92
Msx1P13297 Gm23181-201ENSMUST00000158685 110 ntBASIC3.08□□□□□ -1.92
Msx1P13297 AC124537.1-201ENSMUST00000222890 159 ntBASIC3.08□□□□□ -1.92
Msx1P13297 Gm23056-201ENSMUST00000082803 111 ntBASIC3.08□□□□□ -1.92
Msx1P13297 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
Msx1P13297 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
Msx1P13297 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Msx1P13297 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Msx1P13297 Gm26105-201ENSMUST00000157253 190 ntBASIC3.07□□□□□ -1.92
Msx1P13297 Gm20672-201ENSMUST00000176605 261 ntBASIC3.07□□□□□ -1.92
Msx1P13297 Mir21c-201ENSMUST00000184910 78 ntBASIC3.07□□□□□ -1.92
Msx1P13297 Gm28358-202ENSMUST00000189292 223 ntBASIC3.07□□□□□ -1.92
Msx1P13297 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC3.07□□□□□ -1.92
Msx1P13297 Snord80-201ENSMUST00000083801 81 ntBASIC3.07□□□□□ -1.92
Msx1P13297 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Msx1P13297 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC3.07□□□□□ -1.92
Msx1P13297 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Msx1P13297 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
Msx1P13297 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Msx1P13297 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Msx1P13297 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Msx1P13297 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.06□□□□□ -1.92
Msx1P13297 Gm15190-201ENSMUST00000120855 276 ntBASIC3.06□□□□□ -1.92
Msx1P13297 Gm14389-201ENSMUST00000140453 241 ntBASIC3.06□□□□□ -1.92
Msx1P13297 Gm22338-201ENSMUST00000157715 129 ntBASIC3.06□□□□□ -1.92
Msx1P13297 Mir3103-201ENSMUST00000175474 67 ntBASIC3.06□□□□□ -1.92
Msx1P13297 Gm44399-201ENSMUST00000205043 226 ntBASIC3.06□□□□□ -1.92
Msx1P13297 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Msx1P13297 Snora20-201ENSMUST00000082703 128 ntBASIC3.06□□□□□ -1.92
Msx1P13297 Gm25337-201ENSMUST00000083723 104 ntBASIC3.06□□□□□ -1.92
Msx1P13297 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Msx1P13297 Mir291a-201ENSMUST00000104815 82 ntBASIC3.05□□□□□ -1.92
Msx1P13297 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC3.05□□□□□ -1.92
Msx1P13297 Gm23716-201ENSMUST00000157348 144 ntBASIC3.05□□□□□ -1.92
Msx1P13297 Gm27878-201ENSMUST00000184000 106 ntBASIC3.05□□□□□ -1.92
Msx1P13297 Gm28647-201ENSMUST00000188416 197 ntBASIC3.05□□□□□ -1.92
Msx1P13297 Gm44966-201ENSMUST00000208096 157 ntBASIC3.05□□□□□ -1.92
Msx1P13297 AC115291.1-201ENSMUST00000226803 258 ntBASIC3.05□□□□□ -1.92
Msx1P13297 Gm26441-201ENSMUST00000082590 104 ntBASIC3.05□□□□□ -1.92
Msx1P13297 AF357341-201ENSMUST00000083088 75 ntBASIC3.05□□□□□ -1.92
Msx1P13297 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Msx1P13297 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Msx1P13297 Gm42770-201ENSMUST00000199657 4155 ntBASIC3.04□□□□□ -1.92
Msx1P13297 Gm19855-201ENSMUST00000210145 249 ntBASIC3.04□□□□□ -1.92
Msx1P13297 AC130477.2-201ENSMUST00000228158 274 ntBASIC3.04□□□□□ -1.92
Msx1P13297 Gm23136-201ENSMUST00000083425 99 ntBASIC3.04□□□□□ -1.92
Msx1P13297 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Msx1P13297 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.04□□□□□ -1.92
Msx1P13297 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Msx1P13297 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Msx1P13297 Gm22750-201ENSMUST00000102076 103 ntBASIC3.03□□□□□ -1.92
Msx1P13297 Gm26423-201ENSMUST00000104277 128 ntBASIC3.03□□□□□ -1.92
Msx1P13297 Gm23854-201ENSMUST00000158378 108 ntBASIC3.03□□□□□ -1.92
Msx1P13297 Gm27783-201ENSMUST00000183534 105 ntBASIC3.03□□□□□ -1.92
Msx1P13297 Gm27991-201ENSMUST00000184804 137 ntBASIC3.03□□□□□ -1.92
Msx1P13297 Gm37428-201ENSMUST00000193886 137 ntBASIC3.03□□□□□ -1.92
Msx1P13297 Trbv25-201ENSMUST00000194700 273 ntBASIC3.03□□□□□ -1.92
Msx1P13297 Gm25855-201ENSMUST00000082787 72 ntBASIC3.03□□□□□ -1.92
Msx1P13297 Gm45257-201ENSMUST00000210301 3998 ntBASIC3.03□□□□□ -1.92
Msx1P13297 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Msx1P13297 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Msx1P13297 Mir802-201ENSMUST00000103258 97 ntBASIC3.02□□□□□ -1.93
Msx1P13297 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Msx1P13297 Gm22939-201ENSMUST00000103958 131 ntBASIC3.02□□□□□ -1.93
Msx1P13297 Gm22532-201ENSMUST00000158822 140 ntBASIC3.02□□□□□ -1.93
Msx1P13297 Gm27648-201ENSMUST00000184315 107 ntBASIC3.02□□□□□ -1.93
Msx1P13297 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC3.02□□□□□ -1.93
Msx1P13297 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 155.3 ms